RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 SRGAP2CP0DJJ0 459 aa12.34□□□□□ -0.43
COL11A1-211ENST00000635193 IL10P22301 178 aa12.34□□□□□ -0.43
COL11A1-211ENST00000635193 TMEM179Q6ZVK1 233 aa12.34□□□□□ -0.43
COL11A1-211ENST00000635193 CCT7Q99832 543 aa12.34□□□□□ -0.43
COL11A1-211ENST00000635193 LRRIQ3A6PVS8 624 aaPredicted RBP12.34□□□□□ -0.43
COL11A1-211ENST00000635193 ORC4O43929 436 aa12.34□□□□□ -0.43
COL11A1-211ENST00000635193 NQO1P15559 274 aaKnown RBP12.34□□□□□ -0.43
COL11A1-211ENST00000635193 SCTRP47872 440 aa12.34□□□□□ -0.43
COL11A1-211ENST00000635193 FAM47CQ5HY64 1035 aa12.34□□□□□ -0.43
COL11A1-211ENST00000635193 MDH1BQ5I0G3 518 aa12.34□□□□□ -0.43
COL11A1-211ENST00000635193 WDR93Q6P2C0 686 aa12.34□□□□□ -0.43
COL11A1-211ENST00000635193 ATG9AQ7Z3C6 839 aa12.34□□□□□ -0.43
COL11A1-211ENST00000635193 SUGP1Q8IWZ8 645 aaKnown RBP12.34□□□□□ -0.43
COL11A1-211ENST00000635193 SYNE4Q8N205 404 aa12.34□□□□□ -0.43
COL11A1-211ENST00000635193 USP38Q8NB14 1042 aa12.34□□□□□ -0.43
COL11A1-211ENST00000635193 SPDYE1Q8NFV5 336 aaPredicted RBP12.34□□□□□ -0.43
COL11A1-211ENST00000635193 CARD9Q9H257 536 aa12.34□□□□□ -0.43
COL11A1-211ENST00000635193 KLHL8Q9P2G9 620 aaPredicted RBP12.34□□□□□ -0.43
COL11A1-211ENST00000635193 PCSK1NQ9UHG2 260 aa12.34□□□□□ -0.43
COL11A1-211ENST00000635193 PDS5AQ29RF7 1337 aaKnown RBP12.34□□□□□ -0.43
COL11A1-211ENST00000635193 E7ENQ6 273 aa12.34□□□□□ -0.43
COL11A1-211ENST00000635193 ITIH2P19823 946 aa12.34□□□□□ -0.43
COL11A1-211ENST00000635193 AARSP49588 968 aaKnown RBP eCLIP12.34□□□□□ -0.43
COL11A1-211ENST00000635193 PRAMEP78395 509 aa12.34□□□□□ -0.43
COL11A1-211ENST00000635193 HIF1AQ16665 826 aa12.34□□□□□ -0.43
COL11A1-211ENST00000635193 TRIM60Q495X7 471 aa12.34□□□□□ -0.43
COL11A1-211ENST00000635193 GJC2Q5T442 439 aaPredicted RBP12.34□□□□□ -0.43
COL11A1-211ENST00000635193 LRRC8EQ6NSJ5 796 aa12.34□□□□□ -0.43
COL11A1-211ENST00000635193 ZBTB18Q99592 522 aa12.34□□□□□ -0.43
COL11A1-211ENST00000635193 NDUFA13Q9P0J0 144 aa12.34□□□□□ -0.43
COL11A1-211ENST00000635193 PAMP19021 973 aa12.34□□□□□ -0.43
COL11A1-211ENST00000635193 ROR1Q01973 937 aa12.34□□□□□ -0.43
COL11A1-211ENST00000635193 GRAPQ13588 217 aa12.34□□□□□ -0.43
COL11A1-211ENST00000635193 TSTA3Q13630 321 aaPredicted RBP12.34□□□□□ -0.43
COL11A1-211ENST00000635193 PDIA5Q14554 519 aa12.34□□□□□ -0.43
COL11A1-211ENST00000635193 ARL13BQ3SXY8 428 aa12.34□□□□□ -0.43
COL11A1-211ENST00000635193 ZCWPW2Q504Y3 356 aa12.34□□□□□ -0.43
COL11A1-211ENST00000635193 BTNL9Q6UXG8 535 aa12.34□□□□□ -0.43
COL11A1-211ENST00000635193 FOXP4Q8IVH2 680 aaPredicted RBP12.34□□□□□ -0.43
COL11A1-211ENST00000635193 ELOA2Q8IYF1 753 aaPredicted RBP12.34□□□□□ -0.43
COL11A1-211ENST00000635193 GRAPLQ8TC17 118 aaPredicted RBP12.34□□□□□ -0.43
COL11A1-211ENST00000635193 TSSK1BQ9BXA7 367 aa12.34□□□□□ -0.43
COL11A1-211ENST00000635193 GCOM2Q9BZD3 368 aaPredicted RBP12.34□□□□□ -0.43
COL11A1-211ENST00000635193 SLC5A4Q9NY91 659 aa12.34□□□□□ -0.43
COL11A1-211ENST00000635193 SLC16A3O15427 465 aaKnown RBP12.33□□□□□ -0.43
COL11A1-211ENST00000635193 CYP27B1O15528 508 aa12.33□□□□□ -0.43
COL11A1-211ENST00000635193 TBXAS1P24557 533 aaPredicted RBP12.33□□□□□ -0.43
COL11A1-211ENST00000635193 SMARCA1P28370 1054 aa12.33□□□□□ -0.43
COL11A1-211ENST00000635193 SERPINB1P30740 379 aa12.33□□□□□ -0.43
COL11A1-211ENST00000635193 STK4Q13043 487 aa12.33□□□□□ -0.43
COL11A1-211ENST00000635193 NAB2Q15742 525 aa12.33□□□□□ -0.43
COL11A1-211ENST00000635193 ANKMY2Q8IV38 441 aa12.33□□□□□ -0.43
COL11A1-211ENST00000635193 MCPH1Q8NEM0 835 aa12.33□□□□□ -0.43
COL11A1-211ENST00000635193 OR9Q1Q8NGQ5 310 aa12.33□□□□□ -0.43
COL11A1-211ENST00000635193 EME1Q96AY2 570 aa12.33□□□□□ -0.43
COL11A1-211ENST00000635193 THTPAQ9BU02 230 aa12.33□□□□□ -0.43
COL11A1-211ENST00000635193 SLC9A2Q9UBY0 812 aa12.33□□□□□ -0.43
COL11A1-211ENST00000635193 SEPT3Q9UH03 358 aa12.33□□□□□ -0.43
COL11A1-211ENST00000635193 ABCC3O15438 1527 aa12.33□□□□□ -0.44
COL11A1-211ENST00000635193 PAX7P23759 505 aa12.33□□□□□ -0.44
COL11A1-211ENST00000635193 MRPL28Q13084 256 aaKnown RBP12.33□□□□□ -0.44
COL11A1-211ENST00000635193 KCTD2Q14681 263 aa12.33□□□□□ -0.44
COL11A1-211ENST00000635193 PACS2Q86VP3 889 aa12.33□□□□□ -0.44
COL11A1-211ENST00000635193 DDX42Q86XP3 938 aaKnown RBP eCLIP12.33□□□□□ -0.44
COL11A1-211ENST00000635193 RHPN2Q8IUC4 686 aa12.33□□□□□ -0.44
COL11A1-211ENST00000635193 CCNYL1Q8N7R7 359 aa12.33□□□□□ -0.44
COL11A1-211ENST00000635193 UTYO14607 1347 aa12.33□□□□□ -0.44
COL11A1-211ENST00000635193 DENND3A2RUS2 1198 aa12.33□□□□□ -0.44
COL11A1-211ENST00000635193 FAM47DPA6NHR8 397 aa12.33□□□□□ -0.44
COL11A1-211ENST00000635193 UCHL3P15374 230 aa12.33□□□□□ -0.44
COL11A1-211ENST00000635193 PMLP29590 882 aa12.33□□□□□ -0.44
COL11A1-211ENST00000635193 SLC1A1P43005 524 aa12.33□□□□□ -0.44
COL11A1-211ENST00000635193 KLK7P49862 253 aa12.33□□□□□ -0.44
COL11A1-211ENST00000635193 MTMR1Q13613 665 aa12.33□□□□□ -0.44
COL11A1-211ENST00000635193 RABL6Q3YEC7 729 aaPredicted RBP12.33□□□□□ -0.44
COL11A1-211ENST00000635193 ENOSF1Q7L5Y1 443 aa12.33□□□□□ -0.44
COL11A1-211ENST00000635193 JAMLQ86YT9 394 aa12.33□□□□□ -0.44
COL11A1-211ENST00000635193 THNSL1Q8IYQ7 743 aa12.33□□□□□ -0.44
COL11A1-211ENST00000635193 GIMAP8Q8ND71 665 aaPredicted RBP12.33□□□□□ -0.44
COL11A1-211ENST00000635193 ZNF280CQ8ND82 737 aa12.33□□□□□ -0.44
COL11A1-211ENST00000635193 DDHD1Q8NEL9 900 aa12.33□□□□□ -0.44
COL11A1-211ENST00000635193 PBXIP1Q96AQ6 731 aa12.33□□□□□ -0.44
COL11A1-211ENST00000635193 NAF1Q96HR8 494 aaKnown RBP12.33□□□□□ -0.44
COL11A1-211ENST00000635193 KCNK16Q96T55 309 aa12.33□□□□□ -0.44
COL11A1-211ENST00000635193 TAF6LQ9Y6J9 622 aa12.33□□□□□ -0.44
COL11A1-211ENST00000635193 GOLGA8RI6L899 631 aa12.33□□□□□ -0.44
COL11A1-211ENST00000635193 GLI2P10070 1586 aa12.33□□□□□ -0.44
COL11A1-211ENST00000635193 ZNF699Q32M78 642 aa12.33□□□□□ -0.44
COL11A1-211ENST00000635193 TRIM72Q6ZMU5 477 aa12.33□□□□□ -0.44
COL11A1-211ENST00000635193 ARMCX2Q7L311 632 aa12.33□□□□□ -0.44
COL11A1-211ENST00000635193 GPR101Q96P66 508 aaPredicted RBP12.33□□□□□ -0.44
COL11A1-211ENST00000635193 FUCA2Q9BTY2 467 aa12.33□□□□□ -0.44
COL11A1-211ENST00000635193 STK33Q9BYT3 514 aa12.33□□□□□ -0.44
COL11A1-211ENST00000635193 ADNPQ9H2P0 1102 aa12.33□□□□□ -0.44
COL11A1-211ENST00000635193 TEKT2Q9UIF3 430 aa12.33□□□□□ -0.44
COL11A1-211ENST00000635193 TFR2Q9UP52 801 aa12.33□□□□□ -0.44
COL11A1-211ENST00000635193 TMEM120BA0PK00 339 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 CLDN3O15551 220 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 ASAP2O43150 1006 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 SKAP2O75563 359 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms