RNA–Protein interactions for RNA: ENST00000632421.1

PHACTR4-206, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 2

Gene PHACTR4, Length 3,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-206ENST00000632421 ASAP3Q8TDY4 903 aa13.16□□□□□ -0.3
PHACTR4-206ENST00000632421 WHAMMQ8TF30 809 aa13.16□□□□□ -0.3
PHACTR4-206ENST00000632421 NIFKQ9BYG3 293 aaKnown RBP13.16□□□□□ -0.3
PHACTR4-206ENST00000632421 DDX47Q9H0S4 455 aaKnown RBP13.16□□□□□ -0.3
PHACTR4-206ENST00000632421 TAF1DQ9H5J8 278 aaPredicted RBP13.16□□□□□ -0.3
PHACTR4-206ENST00000632421 SLITRK6Q9H5Y7 841 aa13.16□□□□□ -0.3
PHACTR4-206ENST00000632421 ACP6Q9NPH0 428 aa13.16□□□□□ -0.3
PHACTR4-206ENST00000632421 IGKV6D-21A0A0A0MT36 114 aa13.16□□□□□ -0.3
PHACTR4-206ENST00000632421 LRRIQ4A6NIV6 560 aa13.16□□□□□ -0.3
PHACTR4-206ENST00000632421 ZC3H11AO75152 810 aaKnown RBP eCLIP13.16□□□□□ -0.3
PHACTR4-206ENST00000632421 CLSTN1O94985 981 aa13.16□□□□□ -0.3
PHACTR4-206ENST00000632421 FGGP02679 453 aa13.16□□□□□ -0.3
PHACTR4-206ENST00000632421 FAM153BP0C7A2 387 aa13.16□□□□□ -0.3
PHACTR4-206ENST00000632421 ITGA4P13612 1032 aa13.16□□□□□ -0.3
PHACTR4-206ENST00000632421 CYP11B1P15538 503 aa13.16□□□□□ -0.3
PHACTR4-206ENST00000632421 GLRA2P23416 452 aa13.16□□□□□ -0.3
PHACTR4-206ENST00000632421 EDNRBP24530 442 aa13.16□□□□□ -0.3
PHACTR4-206ENST00000632421 CDR2Q01850 454 aa13.16□□□□□ -0.3
PHACTR4-206ENST00000632421 FAM153CQ494X1 144 aa13.16□□□□□ -0.3
PHACTR4-206ENST00000632421 DCAF12L1Q5VU92 463 aa13.16□□□□□ -0.3
PHACTR4-206ENST00000632421 ENOSF1Q7L5Y1 443 aa13.16□□□□□ -0.3
PHACTR4-206ENST00000632421 EIF1ADQ8N9N8 165 aaKnown RBP13.16□□□□□ -0.3
PHACTR4-206ENST00000632421 AFAP1L1Q8TED9 768 aa13.16□□□□□ -0.3
PHACTR4-206ENST00000632421 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.16□□□□□ -0.3
PHACTR4-206ENST00000632421 KCNN1Q92952 543 aa13.16□□□□□ -0.3
PHACTR4-206ENST00000632421 RUFY1Q96T51 708 aa13.16□□□□□ -0.3
PHACTR4-206ENST00000632421 FAM153AQ9UHL3 310 aa13.16□□□□□ -0.3
PHACTR4-206ENST00000632421 ALG6Q9Y672 507 aa13.16□□□□□ -0.3
PHACTR4-206ENST00000632421 PAPPA2Q9BXP8 1791 aa13.16□□□□□ -0.3
PHACTR4-206ENST00000632421 KIAA0391O15091 583 aaKnown RBP13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 FARP2O94887 1054 aaPredicted RBP13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 ERVK-9P63128 1117 aa13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 CUL1Q13616 776 aa13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 PSMD6Q15008 389 aa13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 PSPC1Q8WXF1 523 aaKnown RBP13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 TATDN2Q93075 761 aa13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 RNPC3Q96LT9 517 aaKnown RBP13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 FNBP1Q96RU3 617 aa13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 NAP1L3Q99457 506 aaPredicted RBP13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 STYXL1Q9Y6J8 313 aa13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 SBF1O95248 1867 aa13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 SOWAHBA6NEL2 793 aa13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 MIF4GDA9UHW6 222 aaKnown RBP13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 OPA1O60313 960 aa13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 ARL2P36404 184 aa13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 RFC5P40937 340 aa13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 IREB2P48200 963 aaKnown RBP13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 GCNT1Q02742 428 aa13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 TRADDQ15628 312 aa13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 PROCA1Q8NCQ7 364 aaPredicted RBP13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 CCDC26Q8TAB7 109 aa13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 FAM81BQ96LP2 452 aa13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 C1orf112Q9NSG2 853 aa13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 AGO2Q9UKV8 859 aaKnown RBP13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 GSTTP1A0A1W2PQM5 241 aa13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 K7ERI5 159 aa13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 GUCY2FP51841 1108 aa13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 NEDD9Q14511 834 aa13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 CLUL1Q15846 466 aa13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 C15orf39Q6ZRI6 1047 aa13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 MAATS1Q7Z4T9 603 aa13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 MREGQ8N565 214 aa13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 DHX38Q92620 1227 aaKnown RBP13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 PAGR1Q9BTK6 254 aa13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 PI4K2AQ9BTU6 479 aa13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 ELP3Q9H9T3 547 aa13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 NRBP2Q9NSY0 501 aa13.15□□□□□ -0.3
PHACTR4-206ENST00000632421 A0A0G2JLL6 359 aaPredicted RBP13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 TMEM110-MUSTN1A8MSY1 372 aa13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 MTA2O94776 668 aa13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 PIGRP01833 764 aa13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 KRT5P13647 590 aa13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 CLDN10P78369 228 aa13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 HLTFQ14527 1009 aaKnown RBP eCLIP13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 FAM160B1Q5W0V3 765 aa13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 SLFN12LQ6IEE8 588 aa13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 PRRT2Q7Z6L0 340 aaPredicted RBP13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 UBL4BQ8N7F7 174 aa13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 ZNF516Q92618 1163 aa13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 ELMO3Q96BJ8 720 aa13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 OTUD5Q96G74 571 aa13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 CEP89Q96ST8 783 aa13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 SH3GL2Q99962 352 aa13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 SIP14410 1827 aa13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 IRF6O14896 467 aa13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 NLRP11P59045 1033 aaKnown RBP13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 ALG3Q92685 438 aa13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 RPS6KC1Q96S38 1066 aa13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 PCYT2Q99447 389 aa13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 AMACRQ9UHK6 382 aa13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 GOLGA6L10A0A0M3HER8 536 aa13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 GOLGA6CA6NDK9 693 aa13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 GOLGA8KD6RF30 607 aa13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 ATMINO43313 823 aaPredicted RBP13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 GOLGA6DP0CG33 693 aa13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 TGFB3P10600 412 aa13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 TNNI1P19237 187 aa13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 ACOT2P49753 483 aa13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 STAT5BP51692 787 aa13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 WDR44Q5JSH3 913 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms