RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 ZNF554Q86TJ5 538 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 PNMA8AQ86V59 439 aaPredicted RBP2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 HOOK3Q86VS8 718 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 NLRP14Q86W24 1093 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 RAB11FIP4Q86YS3 637 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 LRRC49Q8IUZ0 686 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 CNGA4Q8IV77 575 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 MAP7D3Q8IWC1 876 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 IFT20Q8IY31 132 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 CLASRPQ8N2M8 674 aaKnown RBP2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 TCP11L2Q8N4U5 519 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 TMEM57Q8N5G2 664 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 PAF1Q8N7H5 531 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 LINC00482Q8N8I6 264 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 TRIML1Q8N9V2 468 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 ZBTB8BQ8NAP8 495 aaPredicted RBP2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 CCDC197Q8NCU1 140 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 FBXO41Q8TF61 875 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 ZNF473Q8WTR7 871 aaKnown RBP2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 IFT81Q8WYA0 676 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 RSPH1Q8WYR4 309 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 KAT2BQ92831 832 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 CASP10Q92851 521 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 RILPL2Q969X0 211 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 DHX58Q96C10 678 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 HVCN1Q96D96 273 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 MBD6Q96DN6 1003 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 CCDC51Q96ER9 411 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 STAMBPL1Q96FJ0 436 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 DHTKD1Q96HY7 919 aaPredicted RBP2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 RBM17Q96I25 401 aaKnown RBP2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 MPP4Q96JB8 637 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 CATSPER2Q96P56 530 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 CTAGE1Q96RT6 745 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 SMC6Q96SB8 1091 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 ARPC5LQ9BPX5 153 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 FUCA2Q9BTY2 467 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 NACA2Q9H009 215 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 DRC3Q9H069 523 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 MIR1-1HGQ9H1L0 117 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 MEGF9Q9H1U4 602 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 C12orf49Q9H741 205 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 ZSWIM4Q9H7M6 989 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 KAT14Q9H8E8 782 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 CNOT10Q9H9A5 744 aaKnown RBP2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 NOD2Q9HC29 1040 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 SLC39A2Q9NP94 309 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 CHST7Q9NS84 486 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 UBAP1Q9NZ09 502 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 IL1RAPL1Q9NZN1 696 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 NDUFA13Q9P0J0 144 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 SEPT10Q9P0V9 454 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 IFNKQ9P0W0 207 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 PDP2Q9P2J9 529 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 MAGEC2Q9UBF1 373 aaPredicted RBP2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 DDX25Q9UHL0 483 aaKnown RBP2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 DBR1Q9UK59 544 aaKnown RBP2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 MTUS1Q9ULD2 1270 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 HPCAL4Q9UM19 191 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 WDR3Q9UNX4 943 aaKnown RBP eCLIP2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 CARD8Q9Y2G2 431 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 SH3GLB1Q9Y371 365 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 RABGAP1Q9Y3P9 1069 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 TCAF1Q9Y4C2 921 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 IKBKGQ9Y6K9 419 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 SLC4A7Q9Y6M7 1214 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 USH1CQ9Y6N9 552 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 MYOM2P54296 1465 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 SHANK2Q9UPX8 1470 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 NUP160Q12769 1436 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 ANKRD50Q9ULJ7 1429 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 RTL1A6NKG5 1358 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 SHROOM2Q13796 1616 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 BIVM-ERCC5R4GMW8 1640 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 AOX1Q06278 1338 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 ZNF608Q9ULD9 1512 aaPredicted RBP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 A0A1W2PQ27 194 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 A0A1W2PQ64 194 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 A0A1W2PQC6 194 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 A0A1W2PQD8 194 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 MACROD2A1Z1Q3 448 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 EME2A4GXA9 379 aaPredicted RBP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 GMNCA6NCL1 334 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 TMEM110-MUSTN1A8MSY1 372 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 AKR1B15C9JRZ8 316 aaPredicted RBP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 H0YC42 278 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 LSM1O15116 133 aaKnown RBP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 PLSCR1O15162 318 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 KRT86O43790 486 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 PFKFB2O60825 505 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 DIAPH2O60879 1101 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 ZNF623O75123 536 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 SKAP2O75563 359 aaPredicted RBP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 MTRF1O75570 445 aaKnown RBP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 RASSF9O75901 435 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 ATP5HO75947 161 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 TPPPO94811 219 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms