RNA–Protein interactions for RNA: ENST00000628729.2

PDCD6-214, Transcript of programmed cell death 6, humanhuman

TSL 5 BASIC

Gene PDCD6, Length 1,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-214ENST00000628729 KIF4AO95239 1232 aa18.3■□□□□ 0.52
PDCD6-214ENST00000628729 PAPLNO95428 1278 aa18.3■□□□□ 0.52
PDCD6-214ENST00000628729 GLUD1P00367 558 aa18.3■□□□□ 0.52
PDCD6-214ENST00000628729 ADH1AP07327 375 aa18.3■□□□□ 0.52
PDCD6-214ENST00000628729 SPATA31D3P0C874 917 aa18.3■□□□□ 0.52
PDCD6-214ENST00000628729 U2AF2P26368 475 aaKnown RBP eCLIP18.3■□□□□ 0.52
PDCD6-214ENST00000628729 AVPR2P30518 371 aa18.3■□□□□ 0.52
PDCD6-214ENST00000628729 NAMPTP43490 491 aa18.3■□□□□ 0.52
PDCD6-214ENST00000628729 IL17AQ16552 155 aa18.3■□□□□ 0.52
PDCD6-214ENST00000628729 SPATA31D4Q6ZUB0 917 aa18.3■□□□□ 0.52
PDCD6-214ENST00000628729 GLYCTKQ8IVS8 523 aa18.3■□□□□ 0.52
PDCD6-214ENST00000628729 ZBTB8OSQ8IWT0 167 aa18.3■□□□□ 0.52
PDCD6-214ENST00000628729 IGSF22Q8N9C0 903 aa18.3■□□□□ 0.52
PDCD6-214ENST00000628729 ERMNQ8TAM6 284 aa18.3■□□□□ 0.52
PDCD6-214ENST00000628729 BHMT2Q9H2M3 363 aa18.3■□□□□ 0.52
PDCD6-214ENST00000628729 SH2B1Q9NRF2 756 aaPredicted RBP18.3■□□□□ 0.52
PDCD6-214ENST00000628729 N4BP3O15049 544 aa18.29■□□□□ 0.52
PDCD6-214ENST00000628729 TGM5O43548 720 aa18.29■□□□□ 0.52
PDCD6-214ENST00000628729 LIG1P18858 919 aa18.29■□□□□ 0.52
PDCD6-214ENST00000628729 CCT6AP40227 531 aaKnown RBP18.29■□□□□ 0.52
PDCD6-214ENST00000628729 TRAPPC10P48553 1259 aa18.29■□□□□ 0.52
PDCD6-214ENST00000628729 PRPF4BQ13523 1007 aaKnown RBP18.29■□□□□ 0.52
PDCD6-214ENST00000628729 HSP90AA2PQ14568 343 aaPredicted RBP18.29■□□□□ 0.52
PDCD6-214ENST00000628729 MAPK6Q16659 721 aa18.29■□□□□ 0.52
PDCD6-214ENST00000628729 HAUS3Q68CZ6 603 aa18.29■□□□□ 0.52
PDCD6-214ENST00000628729 PRSS55Q6UWB4 352 aaPredicted RBP18.29■□□□□ 0.52
PDCD6-214ENST00000628729 DAW1Q8N136 415 aa18.29■□□□□ 0.52
PDCD6-214ENST00000628729 TMEM105Q8N8V8 129 aa18.29■□□□□ 0.52
PDCD6-214ENST00000628729 RIN2Q8WYP3 895 aaPredicted RBP18.29■□□□□ 0.52
PDCD6-214ENST00000628729 ZSCAN31Q96LW9 406 aaPredicted RBP18.29■□□□□ 0.52
PDCD6-214ENST00000628729 COLEC11Q9BWP8 271 aa18.29■□□□□ 0.52
PDCD6-214ENST00000628729 C2orf40Q9H1Z8 148 aa18.29■□□□□ 0.52
PDCD6-214ENST00000628729 FAM86C1Q9NVL1 165 aa18.29■□□□□ 0.52
PDCD6-214ENST00000628729 TRIP11Q15643 1979 aa18.29■□□□□ 0.52
PDCD6-214ENST00000628729 CLUHO75153 1309 aa18.28■□□□□ 0.52
PDCD6-214ENST00000628729 CCDC195A0A1B0GUA6 201 aa18.28■□□□□ 0.52
PDCD6-214ENST00000628729 ACKR2O00590 384 aa18.28■□□□□ 0.52
PDCD6-214ENST00000628729 MUTP22033 750 aa18.28■□□□□ 0.52
PDCD6-214ENST00000628729 PTPN5P54829 565 aa18.28■□□□□ 0.52
PDCD6-214ENST00000628729 PTGDRQ13258 359 aa18.28■□□□□ 0.52
PDCD6-214ENST00000628729 TUSC3Q13454 348 aa18.28■□□□□ 0.52
PDCD6-214ENST00000628729 NT5DC1Q5TFE4 455 aa18.28■□□□□ 0.52
PDCD6-214ENST00000628729 LILRA6Q6PI73 481 aa18.28■□□□□ 0.52
PDCD6-214ENST00000628729 KCNK18Q7Z418 384 aa18.28■□□□□ 0.52
PDCD6-214ENST00000628729 PALB2Q86YC2 1186 aa18.28■□□□□ 0.52
PDCD6-214ENST00000628729 FAM184AQ8NB25 1140 aa18.28■□□□□ 0.52
PDCD6-214ENST00000628729 DDX19AQ9NUU7 478 aaKnown RBP18.28■□□□□ 0.52
PDCD6-214ENST00000628729 LRWD1Q9UFC0 647 aa18.28■□□□□ 0.52
PDCD6-214ENST00000628729 KIAA1024Q9UPX6 916 aa18.28■□□□□ 0.52
PDCD6-214ENST00000628729 SSX2IPQ9Y2D8 614 aa18.28■□□□□ 0.52
PDCD6-214ENST00000628729 CFAP54Q96N23 3096 aa18.28■□□□□ 0.52
PDCD6-214ENST00000628729 NR1I2O75469 434 aa18.27■□□□□ 0.52
PDCD6-214ENST00000628729 CD2BP2O95400 341 aaKnown RBP18.27■□□□□ 0.52
PDCD6-214ENST00000628729 CDC25AP30304 524 aa18.27■□□□□ 0.52
PDCD6-214ENST00000628729 GNL2Q13823 731 aaKnown RBP18.27■□□□□ 0.52
PDCD6-214ENST00000628729 USP41Q3LFD5 358 aa18.27■□□□□ 0.52
PDCD6-214ENST00000628729 CWF19L1Q69YN2 538 aaKnown RBP18.27■□□□□ 0.52
PDCD6-214ENST00000628729 TAS1R3Q7RTX0 852 aa18.27■□□□□ 0.52
PDCD6-214ENST00000628729 PLCD3Q8N3E9 789 aa18.27■□□□□ 0.52
PDCD6-214ENST00000628729 DEPTORQ8TB45 409 aa18.27■□□□□ 0.52
PDCD6-214ENST00000628729 SNX29Q8TEQ0 813 aa18.27■□□□□ 0.52
PDCD6-214ENST00000628729 MYADMQ96S97 322 aa18.27■□□□□ 0.52
PDCD6-214ENST00000628729 MMTAG2Q9BU76 263 aaKnown RBP18.27■□□□□ 0.52
PDCD6-214ENST00000628729 RHOBTB2Q9BYZ6 727 aa18.27■□□□□ 0.52
PDCD6-214ENST00000628729 WDR6Q9NNW5 1121 aaKnown RBP18.27■□□□□ 0.52
PDCD6-214ENST00000628729 FNIP2Q9P278 1114 aa18.27■□□□□ 0.52
PDCD6-214ENST00000628729 GDAQ9Y2T3 454 aa18.27■□□□□ 0.52
PDCD6-214ENST00000628729 DOCK6Q96HP0 2047 aa18.27■□□□□ 0.51
PDCD6-214ENST00000628729 SF3B1O75533 1304 aaKnown RBP eCLIP18.26■□□□□ 0.512e-6■■■■■ 103.4
PDCD6-214ENST00000628729 E9PMD0 336 aa18.26■□□□□ 0.51
PDCD6-214ENST00000628729 ADAM12O43184 909 aa18.26■□□□□ 0.51
PDCD6-214ENST00000628729 MAPK7Q13164 816 aa18.26■□□□□ 0.51
PDCD6-214ENST00000628729 GLRA4Q5JXX5 417 aa18.26■□□□□ 0.51
PDCD6-214ENST00000628729 OTOP3Q7RTS5 596 aa18.26■□□□□ 0.51
PDCD6-214ENST00000628729 GPR65Q8IYL9 337 aa18.26■□□□□ 0.51
PDCD6-214ENST00000628729 CEP120Q8N960 986 aa18.26■□□□□ 0.51
PDCD6-214ENST00000628729 RSAD2Q8WXG1 361 aa18.26■□□□□ 0.51
PDCD6-214ENST00000628729 ACSF2Q96CM8 615 aaPredicted RBP18.26■□□□□ 0.51
PDCD6-214ENST00000628729 RUSC1Q9BVN2 902 aa18.26■□□□□ 0.51
PDCD6-214ENST00000628729 KCNK12Q9HB15 430 aa18.26■□□□□ 0.51
PDCD6-214ENST00000628729 NOL7Q9UMY1 257 aaKnown RBP18.26■□□□□ 0.51
PDCD6-214ENST00000628729 NARSO43776 548 aaKnown RBP18.25■□□□□ 0.51
PDCD6-214ENST00000628729 TADA2AO75478 443 aa18.25■□□□□ 0.51
PDCD6-214ENST00000628729 THP07101 528 aa18.25■□□□□ 0.51
PDCD6-214ENST00000628729 PPP2R5AQ15172 486 aa18.25■□□□□ 0.51
PDCD6-214ENST00000628729 TMEM132AQ24JP5 1023 aa18.25■□□□□ 0.51
PDCD6-214ENST00000628729 CD300LGQ6UXG3 332 aa18.25■□□□□ 0.51
PDCD6-214ENST00000628729 SMG7Q92540 1137 aaKnown RBP18.25■□□□□ 0.51
PDCD6-214ENST00000628729 KIFAP3Q92845 792 aa18.25■□□□□ 0.51
PDCD6-214ENST00000628729 PPP1R10Q96QC0 940 aaKnown RBP18.25■□□□□ 0.51
PDCD6-214ENST00000628729 CLSTN3Q9BQT9 956 aa18.25■□□□□ 0.51
PDCD6-214ENST00000628729 NT5C3AQ9H0P0 336 aa18.25■□□□□ 0.51
PDCD6-214ENST00000628729 GOLGA2P5Q9HBQ8 144 aa18.25■□□□□ 0.51
PDCD6-214ENST00000628729 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.25■□□□□ 0.51
PDCD6-214ENST00000628729 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.25■□□□□ 0.513e-8■■■□□ 17.7
PDCD6-214ENST00000628729 FBXW11Q9UKB1 542 aa18.25■□□□□ 0.51
PDCD6-214ENST00000628729 DUSP12Q9UNI6 340 aa18.25■□□□□ 0.51
PDCD6-214ENST00000628729 MEFVO15553 781 aaPredicted RBP18.24■□□□□ 0.51
PDCD6-214ENST00000628729 NPTX2P47972 431 aa18.24■□□□□ 0.51
PDCD6-214ENST00000628729 TDGQ13569 410 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms