RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 ZSWIM2Q8NEG5 633 aa20.54■□□□□ 0.88
MECP2-216ENST00000627864 HELQQ8TDG4 1101 aa20.54■□□□□ 0.88
MECP2-216ENST00000627864 P2RX5Q93086 422 aa20.54■□□□□ 0.88
MECP2-216ENST00000627864 TSG101Q99816 390 aa20.54■□□□□ 0.88
MECP2-216ENST00000627864 RSAD1Q9HA92 442 aa20.54■□□□□ 0.88
MECP2-216ENST00000627864 UBN1Q9NPG3 1134 aa20.54■□□□□ 0.88
MECP2-216ENST00000627864 RNF19AQ9NV58 838 aa20.54■□□□□ 0.88
MECP2-216ENST00000627864 HSPBP1Q9NZL4 362 aa20.54■□□□□ 0.88
MECP2-216ENST00000627864 CTNND2Q9UQB3 1225 aa20.54■□□□□ 0.88
MECP2-216ENST00000627864 TRAF3IP3Q9Y228 551 aa20.54■□□□□ 0.88
MECP2-216ENST00000627864 KIAA1671Q9BY89 1806 aa20.53■□□□□ 0.88
MECP2-216ENST00000627864 RECQL4O94761 1208 aa20.53■□□□□ 0.88
MECP2-216ENST00000627864 LETM1O95202 739 aaPredicted RBP20.53■□□□□ 0.88
MECP2-216ENST00000627864 LDHAP00338 332 aaKnown RBP20.53■□□□□ 0.88
MECP2-216ENST00000627864 CLTAP09496 248 aa20.53■□□□□ 0.88
MECP2-216ENST00000627864 CCNE1P24864 410 aa20.53■□□□□ 0.88
MECP2-216ENST00000627864 RABGGTBP53611 331 aa20.53■□□□□ 0.88
MECP2-216ENST00000627864 YARSP54577 528 aaKnown RBP20.53■□□□□ 0.88
MECP2-216ENST00000627864 KYAT1Q16773 422 aa20.53■□□□□ 0.88
MECP2-216ENST00000627864 DPCR1Q3MIW9 517 aa20.53■□□□□ 0.88
MECP2-216ENST00000627864 CLLU1OSQ5K130 101 aa20.53■□□□□ 0.88
MECP2-216ENST00000627864 CENPPQ6IPU0 288 aa20.53■□□□□ 0.88
MECP2-216ENST00000627864 C12orf56Q8IXR9 622 aa20.53■□□□□ 0.88
MECP2-216ENST00000627864 ABI1Q8IZP0 508 aa20.53■□□□□ 0.88
MECP2-216ENST00000627864 GPD1LQ8N335 351 aa20.53■□□□□ 0.88
MECP2-216ENST00000627864 NELFBQ8WX92 580 aa20.53■□□□□ 0.88
MECP2-216ENST00000627864 YME1L1Q96TA2 773 aa20.53■□□□□ 0.88
MECP2-216ENST00000627864 FAM213AQ9BRX8 229 aa20.53■□□□□ 0.88
MECP2-216ENST00000627864 INPP5FQ9Y2H2 1132 aa20.53■□□□□ 0.88
MECP2-216ENST00000627864 GIT1Q9Y2X7 761 aa20.53■□□□□ 0.88
MECP2-216ENST00000627864 TRIM49BA6NDI0 452 aa20.52■□□□□ 0.88
MECP2-216ENST00000627864 TBKBP1A7MCY6 615 aa20.52■□□□□ 0.88
MECP2-216ENST00000627864 KIAA0391O15091 583 aaKnown RBP20.52■□□□□ 0.88
MECP2-216ENST00000627864 TLL1O43897 1013 aa20.52■□□□□ 0.88
MECP2-216ENST00000627864 FAM189A1O60320 539 aa20.52■□□□□ 0.88
MECP2-216ENST00000627864 OFD1O75665 1012 aa20.52■□□□□ 0.88
MECP2-216ENST00000627864 NR3C1P04150 777 aa20.52■□□□□ 0.88
MECP2-216ENST00000627864 STX17P56962 302 aa20.52■□□□□ 0.88
MECP2-216ENST00000627864 PAN2Q504Q3 1202 aaKnown RBP20.52■□□□□ 0.88
MECP2-216ENST00000627864 ANKRD40Q6AI12 368 aa20.52■□□□□ 0.88
MECP2-216ENST00000627864 GLB1LQ6UWU2 654 aa20.52■□□□□ 0.88
MECP2-216ENST00000627864 XXYLT1Q8NBI6 393 aa20.52■□□□□ 0.88
MECP2-216ENST00000627864 GAD1Q99259 594 aa20.52■□□□□ 0.88
MECP2-216ENST00000627864 RAD9AQ99638 391 aa20.52■□□□□ 0.88
MECP2-216ENST00000627864 TMEM117Q9H0C3 514 aa20.52■□□□□ 0.88
MECP2-216ENST00000627864 RPF1Q9H9Y2 349 aaKnown RBP20.52■□□□□ 0.88
MECP2-216ENST00000627864 CPSF3Q9UKF6 684 aaKnown RBP20.52■□□□□ 0.88
MECP2-216ENST00000627864 COL4A6Q14031 1691 aa20.51■□□□□ 0.87
MECP2-216ENST00000627864 TULP1O00294 542 aaPredicted RBP20.51■□□□□ 0.87
MECP2-216ENST00000627864 EXTL3O43909 919 aa20.51■□□□□ 0.87
MECP2-216ENST00000627864 MLH1P40692 756 aa20.51■□□□□ 0.87
MECP2-216ENST00000627864 PMS1P54277 932 aaKnown RBP20.51■□□□□ 0.87
MECP2-216ENST00000627864 HTRA4P83105 476 aaPredicted RBP20.51■□□□□ 0.87
MECP2-216ENST00000627864 PAK1Q13153 545 aa20.51■□□□□ 0.87
MECP2-216ENST00000627864 ZCWPW2Q504Y3 356 aa20.51■□□□□ 0.87
MECP2-216ENST00000627864 CRELD2Q6UXH1 353 aaPredicted RBP20.51■□□□□ 0.87
MECP2-216ENST00000627864 RDH13Q8NBN7 331 aa20.51■□□□□ 0.87
MECP2-216ENST00000627864 ZNF689Q96CS4 500 aaPredicted RBP20.51■□□□□ 0.87
MECP2-216ENST00000627864 FAM212AQ96EL1 285 aa20.51■□□□□ 0.87
MECP2-216ENST00000627864 ZFP42Q96MM3 310 aa20.51■□□□□ 0.87
MECP2-216ENST00000627864 CASD1Q96PB1 797 aa20.51■□□□□ 0.87
MECP2-216ENST00000627864 TOPORSQ9NS56 1045 aaPredicted RBP20.51■□□□□ 0.87
MECP2-216ENST00000627864 DACH1Q9UI36 760 aa20.51■□□□□ 0.87
MECP2-216ENST00000627864 INSL6Q9Y581 213 aa20.51■□□□□ 0.87
MECP2-216ENST00000627864 A0A1W2PPC1 479 aa20.5■□□□□ 0.87
MECP2-216ENST00000627864 SYCE3A1L190 88 aa20.5■□□□□ 0.87
MECP2-216ENST00000627864 ARL5CA6NH57 179 aa20.5■□□□□ 0.87
MECP2-216ENST00000627864 EXOC3O60645 756 aa20.5■□□□□ 0.87
MECP2-216ENST00000627864 CXCL8P10145 99 aa20.5■□□□□ 0.87
MECP2-216ENST00000627864 RPL13P26373 211 aaKnown RBP20.5■□□□□ 0.87
MECP2-216ENST00000627864 BTG3Q14201 252 aaPredicted RBP20.5■□□□□ 0.87
MECP2-216ENST00000627864 ENOX2Q16206 610 aaKnown RBP20.5■□□□□ 0.87
MECP2-216ENST00000627864 STX1AQ16623 288 aa20.5■□□□□ 0.87
MECP2-216ENST00000627864 EDRF1Q3B7T1 1238 aa20.5■□□□□ 0.87
MECP2-216ENST00000627864 SLC10A6Q3KNW5 377 aa20.5■□□□□ 0.87
MECP2-216ENST00000627864 NOMO2Q5JPE7 1267 aa20.5■□□□□ 0.87
MECP2-216ENST00000627864 SLC9A9Q8IVB4 645 aa20.5■□□□□ 0.87
MECP2-216ENST00000627864 URGCPQ8TCY9 931 aa20.5■□□□□ 0.87
MECP2-216ENST00000627864 RPS6KC1Q96S38 1066 aa20.5■□□□□ 0.87
MECP2-216ENST00000627864 CXCL16Q9H2A7 254 aa20.5■□□□□ 0.87
MECP2-216ENST00000627864 KIAA1586Q9HCI6 787 aa20.5■□□□□ 0.87
MECP2-216ENST00000627864 ANO10Q9NW15 660 aa20.5■□□□□ 0.87
MECP2-216ENST00000627864 DMAC2Q9NW81 257 aa20.5■□□□□ 0.87
MECP2-216ENST00000627864 MIOSQ9NXC5 875 aa20.5■□□□□ 0.87
MECP2-216ENST00000627864 BICDL2A1A5D9 508 aa20.49■□□□□ 0.87
MECP2-216ENST00000627864 POMCP01189 267 aa20.49■□□□□ 0.87
MECP2-216ENST00000627864 MYOGP15173 224 aa20.49■□□□□ 0.87
MECP2-216ENST00000627864 NR2F2P24468 414 aa20.49■□□□□ 0.87
MECP2-216ENST00000627864 SCNN1GP51170 649 aa20.49■□□□□ 0.87
MECP2-216ENST00000627864 AFF1P51825 1210 aaKnown RBP20.49■□□□□ 0.87
MECP2-216ENST00000627864 LRRC63Q05C16 580 aa20.49■□□□□ 0.87
MECP2-216ENST00000627864 TYRO3Q06418 890 aa20.49■□□□□ 0.87
MECP2-216ENST00000627864 ADAM9Q13443 819 aa20.49■□□□□ 0.87
MECP2-216ENST00000627864 MYBPC2Q14324 1141 aa20.49■□□□□ 0.87
MECP2-216ENST00000627864 NFIL3Q16649 462 aa20.49■□□□□ 0.87
MECP2-216ENST00000627864 CEP135Q66GS9 1140 aa20.49■□□□□ 0.87
MECP2-216ENST00000627864 CBWD2Q8IUF1 395 aa20.49■□□□□ 0.87
MECP2-216ENST00000627864 CMTR2Q8IYT2 770 aaKnown RBP20.49■□□□□ 0.87
MECP2-216ENST00000627864 SNX27Q96L92 541 aa20.49■□□□□ 0.87
MECP2-216ENST00000627864 RC3H2Q9HBD1 1191 aaKnown RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms