RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 NOL4O94818 638 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 ERLIN2O94905 339 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 INHAP05111 366 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 ASGR1P07306 291 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 ADRB2P07550 413 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 MCF2P10911 925 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 PROZP22891 400 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 GCLMP48507 274 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 MXI1P50539 228 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 AP3M2P53677 418 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 POLR2FP61218 127 aaKnown RBP8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 DLG4P78352 724 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 CLDN10P78369 228 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 CDK17Q00537 523 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 POU5F1Q01860 360 aaKnown RBP8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 SURF1Q15526 300 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 KCNA10Q16322 511 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 NBPF20Q3BBV1 942 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 ZNF568Q3ZCX4 644 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 CBWD6Q4V339 395 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 CBWD3Q5JTY5 395 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 CBWD5Q5RIA9 395 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 C1orf220Q5T0J3 134 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 KRT39Q6A163 491 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 CCSAPQ6IQ19 270 aaPredicted RBP8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 PDXDC1Q6P996 788 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 TRIM65Q6PJ69 517 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 CXCL17Q6UXB2 119 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 RUFY4Q6ZNE9 571 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 RRAGAQ7L523 313 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 RSPH3Q86UC2 560 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 SESTD1Q86VW0 696 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 EHBP1Q8NDI1 1231 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 ZSWIM2Q8NEG5 633 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 BAP1Q92560 729 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 CCDC127Q96BQ5 260 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 ZBTB45Q96K62 511 aaPredicted RBP8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 TSEN34Q9BSV6 310 aaKnown RBP8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 HAPLN2Q9GZV7 340 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 INTS2Q9H0H0 1204 aaKnown RBP8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 FAM49AQ9H0Q0 323 aaPredicted RBP8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 MINDY3Q9H8M7 445 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 PTPRHQ9HD43 1115 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 HMX1Q9NP08 348 aaPredicted RBP8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 SPTLC3Q9NUV7 552 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 GTF2IRD1Q9UHL9 959 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 PLAGL2Q9UPG8 496 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 USP20Q9Y2K6 914 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 MYH9P35579 1960 aaKnown RBP8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 CASP8AP2Q9UKL3 1982 aa8.18□□□□□ -1.1
PTP4A1-206ENST00000627002 GOLGA6L9A6NEM1 432 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 MOXD2PA6NHM9 499 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 LRRC53A6NM62 1247 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 M0QZ92 97 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 RNF225M0QZC1 329 aaPredicted RBP8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 ABLIM1O14639 778 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 EPHB6O15197 1021 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 TREHO43280 583 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 B4GALT5O43286 388 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 IL18RAPO95256 599 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 EDN1P05305 212 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 IQCF3P0C7M6 154 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 DLATP10515 647 aaKnown RBP8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 HARSP12081 509 aaKnown RBP8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 ACTN1P12814 892 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 DARSP14868 501 aaKnown RBP8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 UCHL3P15374 230 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 SLC9A1P19634 815 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 AXLP30530 894 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 CYLC1P35663 651 aaPredicted RBP8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 ACOT2P49753 483 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 CRYBB1P53674 252 aaPredicted RBP8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 PTPN11Q06124 597 aaPredicted RBP8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 PPP3CAQ08209 521 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 AMHR2Q16671 573 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 KIZQ2M2Z5 673 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 EPC2Q52LR7 807 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 SFMBT2Q5VUG0 894 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 DPY19L2P1Q6NXN4 242 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 CRELD2Q6UXH1 353 aaPredicted RBP8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 ZBTB33Q86T24 672 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 RPAINQ86UA6 219 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 BRSK2Q8IWQ3 736 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 CCDC170Q8IYT3 715 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 CCAR2Q8N163 923 aaKnown RBP8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 PLEKHO2Q8TD55 490 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 DNAJB3Q8WWF6 145 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 ZNF668Q96K58 619 aaPredicted RBP8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 FAM81BQ96LP2 452 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 SPAG5Q96R06 1193 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 PPP1R16BQ96T49 567 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 CGRRF1Q99675 332 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 ADPGKQ9BRR6 497 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 TMEM117Q9H0C3 514 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 PDZD7Q9H5P4 517 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 CPSF3Q9UKF6 684 aaKnown RBP8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 COQ4Q9Y3A0 265 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 TRIM17Q9Y577 477 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 ZSWIM8A7E2V4 1837 aa8.17□□□□□ -1.1
PTP4A1-206ENST00000627002 WDR81Q562E7 1941 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms