RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 ACAP3Q96P50 834 aa15.32■□□□□ 0.04
SNRPA1-216ENST00000626000 ACCSQ96QU6 501 aa15.32■□□□□ 0.04
SNRPA1-216ENST00000626000 COLEC11Q9BWP8 271 aa15.32■□□□□ 0.04
SNRPA1-216ENST00000626000 NRDE2Q9H7Z3 1164 aa15.32■□□□□ 0.04
SNRPA1-216ENST00000626000 PLEKHA5Q9HAU0 1116 aa15.32■□□□□ 0.04
SNRPA1-216ENST00000626000 ANKFY1Q9P2R3 1169 aa15.32■□□□□ 0.04
SNRPA1-216ENST00000626000 HPSEQ9Y251 543 aa15.32■□□□□ 0.04
SNRPA1-216ENST00000626000 SSX2IPQ9Y2D8 614 aa15.32■□□□□ 0.04
SNRPA1-216ENST00000626000 HES2Q9Y543 173 aa15.32■□□□□ 0.04
SNRPA1-216ENST00000626000 UBE4BO95155 1302 aa15.32■□□□□ 0.04
SNRPA1-216ENST00000626000 MEIS3P2A8K0S8 358 aa15.31■□□□□ 0.04
SNRPA1-216ENST00000626000 KIAA0391O15091 583 aaKnown RBP15.31■□□□□ 0.04
SNRPA1-216ENST00000626000 GRM6O15303 877 aa15.31■□□□□ 0.04
SNRPA1-216ENST00000626000 EIF3DO15371 548 aaKnown RBP eCLIP15.31■□□□□ 0.04
SNRPA1-216ENST00000626000 GCNT3O95395 438 aa15.31■□□□□ 0.04
SNRPA1-216ENST00000626000 POMCP01189 267 aa15.31■□□□□ 0.04
SNRPA1-216ENST00000626000 GALTP07902 379 aa15.31■□□□□ 0.04
SNRPA1-216ENST00000626000 CLTAP09496 248 aa15.31■□□□□ 0.04
SNRPA1-216ENST00000626000 DSC1Q08554 894 aa15.31■□□□□ 0.04
SNRPA1-216ENST00000626000 TUSC3Q13454 348 aa15.31■□□□□ 0.04
SNRPA1-216ENST00000626000 LONRF3Q496Y0 759 aa15.31■□□□□ 0.04
SNRPA1-216ENST00000626000 UNC13DQ70J99 1090 aa15.31■□□□□ 0.04
SNRPA1-216ENST00000626000 CD302Q8IX05 232 aa15.31■□□□□ 0.04
SNRPA1-216ENST00000626000 MICALL1Q8N3F8 863 aa15.31■□□□□ 0.04
SNRPA1-216ENST00000626000 POF1BQ8WVV4 589 aa15.31■□□□□ 0.04
SNRPA1-216ENST00000626000 UROC1Q96N76 676 aa15.31■□□□□ 0.04
SNRPA1-216ENST00000626000 FIZ1Q96SL8 496 aa15.31■□□□□ 0.04
SNRPA1-216ENST00000626000 CDCA3Q99618 268 aaPredicted RBP15.31■□□□□ 0.04
SNRPA1-216ENST00000626000 SNTG2Q9NY99 539 aa15.31■□□□□ 0.04
SNRPA1-216ENST00000626000 HOOK1Q9UJC3 728 aaKnown RBP15.31■□□□□ 0.04
SNRPA1-216ENST00000626000 FAN1Q9Y2M0 1017 aa15.31■□□□□ 0.04
SNRPA1-216ENST00000626000 PRRC2BQ5JSZ5 2229 aaKnown RBP15.31■□□□□ 0.04
SNRPA1-216ENST00000626000 TTLL13PA6NNM8 815 aa15.3■□□□□ 0.04
SNRPA1-216ENST00000626000 CITO14578 2027 aa15.3■□□□□ 0.04
SNRPA1-216ENST00000626000 OGTO15294 1046 aa15.3■□□□□ 0.04
SNRPA1-216ENST00000626000 XPOTO43592 962 aaKnown RBP15.3■□□□□ 0.04
SNRPA1-216ENST00000626000 PPP1R37O75864 691 aa15.3■□□□□ 0.04
SNRPA1-216ENST00000626000 EDN1P05305 212 aa15.3■□□□□ 0.04
SNRPA1-216ENST00000626000 SRGAP2BP0DMP2 458 aa15.3■□□□□ 0.04
SNRPA1-216ENST00000626000 AKAP5P24588 427 aa15.3■□□□□ 0.04
SNRPA1-216ENST00000626000 SCNN1GP51170 649 aa15.3■□□□□ 0.04
SNRPA1-216ENST00000626000 SNRPFP62306 86 aaKnown RBP15.3■□□□□ 0.04
SNRPA1-216ENST00000626000 ELAVL2Q12926 359 aaKnown RBP15.3■□□□□ 0.04
SNRPA1-216ENST00000626000 COASYQ13057 564 aa15.3■□□□□ 0.04
SNRPA1-216ENST00000626000 L1TD1Q5T7N2 865 aaKnown RBP15.3■□□□□ 0.04
SNRPA1-216ENST00000626000 DDX53Q86TM3 631 aaKnown RBP15.3■□□□□ 0.04
SNRPA1-216ENST00000626000 COLGALT2Q8IYK4 626 aa15.3■□□□□ 0.04
SNRPA1-216ENST00000626000 GPR65Q8IYL9 337 aa15.3■□□□□ 0.04
SNRPA1-216ENST00000626000 SYCP3Q8IZU3 236 aa15.3■□□□□ 0.04
SNRPA1-216ENST00000626000 FSIP1Q8NA03 581 aa15.3■□□□□ 0.04
SNRPA1-216ENST00000626000 IGSF21Q96ID5 467 aa15.3■□□□□ 0.04
SNRPA1-216ENST00000626000 ZFP42Q96MM3 310 aa15.3■□□□□ 0.04
SNRPA1-216ENST00000626000 GBP3Q9H0R5 595 aa15.3■□□□□ 0.04
SNRPA1-216ENST00000626000 ALG13Q9NP73 1137 aaKnown RBP15.3■□□□□ 0.04
SNRPA1-216ENST00000626000 THEGQ9P2T0 379 aa15.3■□□□□ 0.04
SNRPA1-216ENST00000626000 GDAQ9Y2T3 454 aa15.3■□□□□ 0.04
SNRPA1-216ENST00000626000 A0A0C4DFX4 3053 aa15.29■□□□□ 0.04
SNRPA1-216ENST00000626000 A0A1B0GVL5 298 aa15.29■□□□□ 0.04
SNRPA1-216ENST00000626000 ABLIM1O14639 778 aa15.29■□□□□ 0.04
SNRPA1-216ENST00000626000 ACTN4O43707 911 aaKnown RBP15.29■□□□□ 0.04
SNRPA1-216ENST00000626000 KIF20AO95235 890 aa15.29■□□□□ 0.04
SNRPA1-216ENST00000626000 LDHAP00338 332 aaKnown RBP15.29■□□□□ 0.04
SNRPA1-216ENST00000626000 NMT1P30419 496 aaKnown RBP15.29■□□□□ 0.04
SNRPA1-216ENST00000626000 PSMD2Q13200 908 aa15.29■□□□□ 0.04
SNRPA1-216ENST00000626000 SMC1AQ14683 1233 aaKnown RBP15.29■□□□□ 0.04
SNRPA1-216ENST00000626000 SKIV2LQ15477 1246 aaKnown RBP15.29■□□□□ 0.04
SNRPA1-216ENST00000626000 XKR4Q5GH76 650 aa15.29■□□□□ 0.04
SNRPA1-216ENST00000626000 FAM26FQ5R3K3 315 aa15.29■□□□□ 0.04
SNRPA1-216ENST00000626000 ZBTB33Q86T24 672 aa15.29■□□□□ 0.04
SNRPA1-216ENST00000626000 MICAL1Q8TDZ2 1067 aa15.29■□□□□ 0.04
SNRPA1-216ENST00000626000 DDX27Q96GQ7 796 aaKnown RBP15.29■□□□□ 0.04
SNRPA1-216ENST00000626000 MSTO1Q9BUK6 570 aa15.29■□□□□ 0.04
SNRPA1-216ENST00000626000 STRA6Q9BX79 667 aa15.29■□□□□ 0.04
SNRPA1-216ENST00000626000 GTPBP4Q9BZE4 634 aaKnown RBP15.29■□□□□ 0.04
SNRPA1-216ENST00000626000 ENTPD7Q9NQZ7 604 aa15.29■□□□□ 0.04
SNRPA1-216ENST00000626000 CGNQ9P2M7 1197 aaKnown RBP15.29■□□□□ 0.04
SNRPA1-216ENST00000626000 STYXL1Q9Y6J8 313 aa15.29■□□□□ 0.04
SNRPA1-216ENST00000626000 PLXNA4Q9HCM2 1894 aa15.29■□□□□ 0.04
SNRPA1-216ENST00000626000 A0A0B4J269 797 aa15.28■□□□□ 0.04
SNRPA1-216ENST00000626000 DDHD2O94830 711 aa15.28■□□□□ 0.04
SNRPA1-216ENST00000626000 KCNE1P15382 129 aa15.28■□□□□ 0.04
SNRPA1-216ENST00000626000 PAX3P23760 479 aa15.28■□□□□ 0.04
SNRPA1-216ENST00000626000 OR1G1P47890 313 aa15.28■□□□□ 0.04
SNRPA1-216ENST00000626000 SLC11A1P49279 550 aa15.28■□□□□ 0.04
SNRPA1-216ENST00000626000 NDUFA8P51970 172 aa15.28■□□□□ 0.04
SNRPA1-216ENST00000626000 CREMQ03060 361 aa15.28■□□□□ 0.04
SNRPA1-216ENST00000626000 PPP2R3AQ06190 1150 aa15.28■□□□□ 0.04
SNRPA1-216ENST00000626000 ZNF280BQ86YH2 543 aa15.28■□□□□ 0.04
SNRPA1-216ENST00000626000 TMEM87AQ8NBN3 555 aa15.28■□□□□ 0.04
SNRPA1-216ENST00000626000 GSTCDQ8NEC7 633 aa15.28■□□□□ 0.04
SNRPA1-216ENST00000626000 ATXN2LQ8WWM7 1075 aaKnown RBP15.28■□□□□ 0.04
SNRPA1-216ENST00000626000 SNX27Q96L92 541 aa15.28■□□□□ 0.04
SNRPA1-216ENST00000626000 TCF25Q9BQ70 676 aa15.28■□□□□ 0.04
SNRPA1-216ENST00000626000 EXOC1Q9NV70 894 aa15.28■□□□□ 0.04
SNRPA1-216ENST00000626000 KLK14Q9P0G3 267 aa15.28■□□□□ 0.04
SNRPA1-216ENST00000626000 CNTN3Q9P232 1028 aa15.28■□□□□ 0.04
SNRPA1-216ENST00000626000 SERTAD1Q9UHV2 236 aa15.28■□□□□ 0.04
SNRPA1-216ENST00000626000 IRAK3Q9Y616 596 aa15.28■□□□□ 0.04
SNRPA1-216ENST00000626000 SF3B1O75533 1304 aaKnown RBP eCLIP15.27■□□□□ 0.047e-7■■■■■ 63.2
SNRPA1-216ENST00000626000 NRP1O14786 923 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms