RNA–Protein interactions for RNA: ENST00000625349.2

LUC7L3-223, Transcript of LUC7 like 3 pre-mRNA splicing factor, human

TSL 2 BASIC

Gene LUC7L3, Length 408 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LUC7L3-223	ENST00000625349	NUBP1	P53384	320 aa		13.86	□□□□□ -0.19
LUC7L3-223	ENST00000625349	SPAG1	Q07617	926 aa		13.86	□□□□□ -0.19
LUC7L3-223	ENST00000625349	PLPP4	Q5VZY2	271 aa		13.86	□□□□□ -0.19
LUC7L3-223	ENST00000625349	SWSAP1	Q6NVH7	229 aa		13.86	□□□□□ -0.19
LUC7L3-223	ENST00000625349	KCNK18	Q7Z418	384 aa		13.86	□□□□□ -0.19
LUC7L3-223	ENST00000625349	TPH2	Q8IWU9	490 aa		13.86	□□□□□ -0.19
LUC7L3-223	ENST00000625349	EXOC8	Q8IYI6	725 aa		13.86	□□□□□ -0.19
LUC7L3-223	ENST00000625349	BBX	Q8WY36	941 aa	Predicted RBP	13.86	□□□□□ -0.19
LUC7L3-223	ENST00000625349	CASD1	Q96PB1	797 aa		13.86	□□□□□ -0.19
LUC7L3-223	ENST00000625349	TCF25	Q9BQ70	676 aa		13.86	□□□□□ -0.19
LUC7L3-223	ENST00000625349	BLZF1	Q9H2G9	400 aa		13.86	□□□□□ -0.19
LUC7L3-223	ENST00000625349	RNF19A	Q9NV58	838 aa		13.86	□□□□□ -0.19
LUC7L3-223	ENST00000625349	COL4A3BP	Q9Y5P4	624 aa		13.86	□□□□□ -0.19
LUC7L3-223	ENST00000625349	VPS13A	Q96RL7	3174 aa		13.86	□□□□□ -0.19
LUC7L3-223	ENST00000625349		E9PMD0	336 aa		13.85	□□□□□ -0.19
LUC7L3-223	ENST00000625349	CBFA2T2	O43439	604 aa		13.85	□□□□□ -0.19
LUC7L3-223	ENST00000625349	FGFR1OP	O95684	399 aa	Known RBP	13.85	□□□□□ -0.19
LUC7L3-223	ENST00000625349	VTN	P04004	478 aa		13.85	□□□□□ -0.19
LUC7L3-223	ENST00000625349	ZNF18	P17022	549 aa		13.85	□□□□□ -0.19
LUC7L3-223	ENST00000625349	ZNF131	P52739	623 aa		13.85	□□□□□ -0.19
LUC7L3-223	ENST00000625349	VCP	P55072	806 aa	Known RBP	13.85	□□□□□ -0.19
LUC7L3-223	ENST00000625349	PAK1	Q13153	545 aa		13.85	□□□□□ -0.19
LUC7L3-223	ENST00000625349	ARSH	Q5FYA8	562 aa		13.85	□□□□□ -0.19
LUC7L3-223	ENST00000625349	POTEG	Q6S5H5	508 aa		13.85	□□□□□ -0.19
LUC7L3-223	ENST00000625349	KCNT2	Q6UVM3	1135 aa		13.85	□□□□□ -0.19
LUC7L3-223	ENST00000625349	LRRC55	Q6ZSA7	311 aa		13.85	□□□□□ -0.19
LUC7L3-223	ENST00000625349	C1orf186	Q6ZWK4	172 aa		13.85	□□□□□ -0.19
LUC7L3-223	ENST00000625349	GPBP1	Q86WP2	473 aa		13.85	□□□□□ -0.19
LUC7L3-223	ENST00000625349	LRRC43	Q8N309	656 aa		13.85	□□□□□ -0.19
LUC7L3-223	ENST00000625349	AOPEP	Q8N6M6	819 aa		13.85	□□□□□ -0.19
LUC7L3-223	ENST00000625349	KCNN1	Q92952	543 aa		13.85	□□□□□ -0.19
LUC7L3-223	ENST00000625349	GJA10	Q969M2	543 aa		13.85	□□□□□ -0.19
LUC7L3-223	ENST00000625349	DYDC2	Q96IM9	177 aa		13.85	□□□□□ -0.19
LUC7L3-223	ENST00000625349	PLIN2	Q99541	437 aa		13.85	□□□□□ -0.19
LUC7L3-223	ENST00000625349	LXN	Q9BS40	222 aa		13.85	□□□□□ -0.19
LUC7L3-223	ENST00000625349	C17orf75	Q9HAS0	396 aa		13.85	□□□□□ -0.19
LUC7L3-223	ENST00000625349	ENTPD7	Q9NQZ7	604 aa		13.85	□□□□□ -0.19
LUC7L3-223	ENST00000625349	PANK4	Q9NVE7	773 aa		13.85	□□□□□ -0.19
LUC7L3-223	ENST00000625349	RGL1	Q9NZL6	768 aa		13.85	□□□□□ -0.19
LUC7L3-223	ENST00000625349	HIDE1	A8MVS5	230 aa		13.84	□□□□□ -0.19
LUC7L3-223	ENST00000625349	MAGEB2	O15479	319 aa		13.84	□□□□□ -0.19
LUC7L3-223	ENST00000625349	CCNE1	P24864	410 aa		13.84	□□□□□ -0.19
LUC7L3-223	ENST00000625349	PRCP	P42785	496 aa		13.84	□□□□□ -0.19
LUC7L3-223	ENST00000625349	KRT17	Q04695	432 aa		13.84	□□□□□ -0.19
LUC7L3-223	ENST00000625349	LRRC63	Q05C16	580 aa		13.84	□□□□□ -0.19
LUC7L3-223	ENST00000625349	ALCAM	Q13740	583 aa		13.84	□□□□□ -0.19
LUC7L3-223	ENST00000625349	GIT2	Q14161	759 aa		13.84	□□□□□ -0.19
LUC7L3-223	ENST00000625349	CENPP	Q6IPU0	288 aa		13.84	□□□□□ -0.19
LUC7L3-223	ENST00000625349	RINT1	Q6NUQ1	792 aa		13.84	□□□□□ -0.19
LUC7L3-223	ENST00000625349	PPP4R3CP	Q6ZMV5	832 aa		13.84	□□□□□ -0.19
LUC7L3-223	ENST00000625349	STXBP4	Q6ZWJ1	553 aa		13.84	□□□□□ -0.19
LUC7L3-223	ENST00000625349	METTL13	Q8N6R0	699 aa		13.84	□□□□□ -0.19
LUC7L3-223	ENST00000625349	LINC01465	Q8N7H1	131 aa		13.84	□□□□□ -0.19
LUC7L3-223	ENST00000625349	TMEM174	Q8WUU8	243 aa		13.84	□□□□□ -0.19
LUC7L3-223	ENST00000625349	STAM	Q92783	540 aa		13.84	□□□□□ -0.19
LUC7L3-223	ENST00000625349	CASP10	Q92851	521 aa		13.84	□□□□□ -0.19
LUC7L3-223	ENST00000625349	ZNF558	Q96NG5	402 aa		13.84	□□□□□ -0.19
LUC7L3-223	ENST00000625349	PPP1R16B	Q96T49	567 aa		13.84	□□□□□ -0.19
LUC7L3-223	ENST00000625349	BHMT2	Q9H2M3	363 aa		13.84	□□□□□ -0.19
LUC7L3-223	ENST00000625349	ADAMTS10	Q9H324	1103 aa		13.84	□□□□□ -0.19
LUC7L3-223	ENST00000625349	SPG21	Q9NZD8	308 aa		13.84	□□□□□ -0.19
LUC7L3-223	ENST00000625349	NR2E1	Q9Y466	385 aa		13.84	□□□□□ -0.19
LUC7L3-223	ENST00000625349	ATRX	P46100	2492 aa		13.84	□□□□□ -0.19
LUC7L3-223	ENST00000625349	GOLGA6L6	A8MZA4	724 aa		13.83	□□□□□ -0.2
LUC7L3-223	ENST00000625349	ADCY5	O95622	1261 aa		13.83	□□□□□ -0.2
LUC7L3-223	ENST00000625349	CLCN3	P51790	818 aa		13.83	□□□□□ -0.2
LUC7L3-223	ENST00000625349	ITIH3	Q06033	890 aa		13.83	□□□□□ -0.2
LUC7L3-223	ENST00000625349	XKR3	Q5GH77	459 aa		13.83	□□□□□ -0.2
LUC7L3-223	ENST00000625349	CDKAL1	Q5VV42	579 aa		13.83	□□□□□ -0.2
LUC7L3-223	ENST00000625349	TMC7	Q7Z402	723 aa		13.83	□□□□□ -0.2
LUC7L3-223	ENST00000625349	ECHDC2	Q86YB7	292 aa		13.83	□□□□□ -0.2
LUC7L3-223	ENST00000625349	UBALD2	Q8IYN6	164 aa		13.83	□□□□□ -0.2
LUC7L3-223	ENST00000625349	ABI1	Q8IZP0	508 aa		13.83	□□□□□ -0.2
LUC7L3-223	ENST00000625349	MRPL43	Q8N983	215 aa	Known RBP	13.83	□□□□□ -0.2
LUC7L3-223	ENST00000625349	FAM167A	Q96KS9	214 aa		13.83	□□□□□ -0.2
LUC7L3-223	ENST00000625349	RIPOR3	Q96MK2	946 aa		13.83	□□□□□ -0.2
LUC7L3-223	ENST00000625349	NECTIN4	Q96NY8	510 aa		13.83	□□□□□ -0.2
LUC7L3-223	ENST00000625349	MAP7D2	Q96T17	732 aa		13.83	□□□□□ -0.2
LUC7L3-223	ENST00000625349	ADAM7	Q9H2U9	754 aa		13.83	□□□□□ -0.2
LUC7L3-223	ENST00000625349	ST6GALNAC4	Q9H4F1	302 aa		13.83	□□□□□ -0.2
LUC7L3-223	ENST00000625349	THAP9	Q9H5L6	903 aa		13.83	□□□□□ -0.2
LUC7L3-223	ENST00000625349	NFE2L3	Q9Y4A8	694 aa		13.83	□□□□□ -0.2
LUC7L3-223	ENST00000625349	SAMM50	Q9Y512	469 aa		13.83	□□□□□ -0.2
LUC7L3-223	ENST00000625349	TPR	P12270	2363 aa	Known RBP	13.82	□□□□□ -0.2
LUC7L3-223	ENST00000625349		A0A0U1RQF3	1178 aa		13.82	□□□□□ -0.2
LUC7L3-223	ENST00000625349	ARHGEF35	A5YM69	484 aa		13.82	□□□□□ -0.2
LUC7L3-223	ENST00000625349	EIF3D	O15371	548 aa	Known RBP eCLIP	13.82	□□□□□ -0.2	5e-13	■■■□□ 15.1
LUC7L3-223	ENST00000625349	KRT18	P05783	430 aa	Known RBP	13.82	□□□□□ -0.2
LUC7L3-223	ENST00000625349	CD44	P16070	742 aa	Known RBP	13.82	□□□□□ -0.2
LUC7L3-223	ENST00000625349	ZSCAN20	P17040	1043 aa	Predicted RBP	13.82	□□□□□ -0.2
LUC7L3-223	ENST00000625349	EIF4B	P23588	611 aa	Known RBP	13.82	□□□□□ -0.2
LUC7L3-223	ENST00000625349	TMOD1	P28289	359 aa		13.82	□□□□□ -0.2
LUC7L3-223	ENST00000625349	YWHAB	P31946	246 aa	Known RBP	13.82	□□□□□ -0.2
LUC7L3-223	ENST00000625349	RARRES1	P49788	294 aa		13.82	□□□□□ -0.2
LUC7L3-223	ENST00000625349	ZNF75D	P51815	510 aa		13.82	□□□□□ -0.2
LUC7L3-223	ENST00000625349	NLRP11	P59045	1033 aa	Known RBP	13.82	□□□□□ -0.2
LUC7L3-223	ENST00000625349	SNRPF	P62306	86 aa	Known RBP	13.82	□□□□□ -0.2
LUC7L3-223	ENST00000625349	CYP4A11	Q02928	519 aa		13.82	□□□□□ -0.2
LUC7L3-223	ENST00000625349	STK4	Q13043	487 aa		13.82	□□□□□ -0.2
LUC7L3-223	ENST00000625349	CTTN	Q14247	550 aa	Known RBP	13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms