RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 KIAA1524Q8TCG1 905 aa12.78□□□□□ -0.36
LINC00963-220ENST00000625171 NLRP7Q8WX94 980 aa12.78□□□□□ -0.36
LINC00963-220ENST00000625171 ZBTB10Q96DT7 871 aa12.78□□□□□ -0.36
LINC00963-220ENST00000625171 FAM81BQ96LP2 452 aa12.78□□□□□ -0.36
LINC00963-220ENST00000625171 GLT1D1Q96MS3 346 aa12.78□□□□□ -0.36
LINC00963-220ENST00000625171 MSTO1Q9BUK6 570 aa12.78□□□□□ -0.36
LINC00963-220ENST00000625171 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.78□□□□□ -0.362e-6■■□□□ 13.3
LINC00963-220ENST00000625171 TMEM8AQ9HCN3 771 aa12.78□□□□□ -0.36
LINC00963-220ENST00000625171 ABHD10Q9NUJ1 306 aa12.78□□□□□ -0.36
LINC00963-220ENST00000625171 CEP72Q9P209 647 aa12.78□□□□□ -0.36
LINC00963-220ENST00000625171 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.78□□□□□ -0.36
LINC00963-220ENST00000625171 TTLL13PA6NNM8 815 aa12.77□□□□□ -0.37
LINC00963-220ENST00000625171 DNM1LO00429 736 aa12.77□□□□□ -0.37
LINC00963-220ENST00000625171 PES1O00541 588 aaKnown RBP12.77□□□□□ -0.37
LINC00963-220ENST00000625171 ARHGAP6O43182 974 aa12.77□□□□□ -0.37
LINC00963-220ENST00000625171 B4GALT4O60513 344 aa12.77□□□□□ -0.37
LINC00963-220ENST00000625171 TSPAN1O60635 241 aa12.77□□□□□ -0.37
LINC00963-220ENST00000625171 ZC3H11AO75152 810 aaKnown RBP eCLIP12.77□□□□□ -0.37
LINC00963-220ENST00000625171 CLTAP09496 248 aa12.77□□□□□ -0.37
LINC00963-220ENST00000625171 SKILP12757 684 aa12.77□□□□□ -0.37
LINC00963-220ENST00000625171 ARF4P18085 180 aaPredicted RBP12.77□□□□□ -0.37
LINC00963-220ENST00000625171 HOXA11P31270 313 aaPredicted RBP12.77□□□□□ -0.37
LINC00963-220ENST00000625171 KRT9P35527 623 aa12.77□□□□□ -0.37
LINC00963-220ENST00000625171 PPP3CAQ08209 521 aa12.77□□□□□ -0.37
LINC00963-220ENST00000625171 ITGA7Q13683 1181 aa12.77□□□□□ -0.37
LINC00963-220ENST00000625171 NOLC1Q14978 699 aaKnown RBP eCLIP12.77□□□□□ -0.37
LINC00963-220ENST00000625171 SNX17Q15036 470 aa12.77□□□□□ -0.37
LINC00963-220ENST00000625171 EPC2Q52LR7 807 aa12.77□□□□□ -0.37
LINC00963-220ENST00000625171 KLHDC7AQ5VTJ3 777 aa12.77□□□□□ -0.37
LINC00963-220ENST00000625171 TCERG1LQ5VWI1 586 aa12.77□□□□□ -0.37
LINC00963-220ENST00000625171 GDF6Q6KF10 455 aaPredicted RBP12.77□□□□□ -0.37
LINC00963-220ENST00000625171 RUFY4Q6ZNE9 571 aa12.77□□□□□ -0.37
LINC00963-220ENST00000625171 NT5DC4Q86YG4 428 aa12.77□□□□□ -0.37
LINC00963-220ENST00000625171 TMTC1Q8IUR5 882 aa12.77□□□□□ -0.37
LINC00963-220ENST00000625171 CD302Q8IX05 232 aa12.77□□□□□ -0.37
LINC00963-220ENST00000625171 RDH13Q8NBN7 331 aa12.77□□□□□ -0.37
LINC00963-220ENST00000625171 PLEKHO2Q8TD55 490 aa12.77□□□□□ -0.37
LINC00963-220ENST00000625171 DNAJB3Q8WWF6 145 aa12.77□□□□□ -0.37
LINC00963-220ENST00000625171 BAP1Q92560 729 aa12.77□□□□□ -0.37
LINC00963-220ENST00000625171 SAAL1Q96ER3 474 aa12.77□□□□□ -0.37
LINC00963-220ENST00000625171 FAXDC2Q96IV6 333 aa12.77□□□□□ -0.37
LINC00963-220ENST00000625171 ZBTB45Q96K62 511 aaPredicted RBP12.77□□□□□ -0.37
LINC00963-220ENST00000625171 FAM213AQ9BRX8 229 aa12.77□□□□□ -0.37
LINC00963-220ENST00000625171 CELF4Q9BZC1 486 aaKnown RBP12.77□□□□□ -0.37
LINC00963-220ENST00000625171 GANQ9H2C0 597 aa12.77□□□□□ -0.37
LINC00963-220ENST00000625171 MMRN2Q9H8L6 949 aa12.77□□□□□ -0.37
LINC00963-220ENST00000625171 AIPL1Q9NZN9 384 aa12.77□□□□□ -0.37
LINC00963-220ENST00000625171 OGDHLQ9ULD0 1010 aa12.77□□□□□ -0.37
LINC00963-220ENST00000625171 LRRIQ3A6PVS8 624 aaPredicted RBP12.76□□□□□ -0.37
LINC00963-220ENST00000625171 ESPNB1AK53 854 aa12.76□□□□□ -0.37
LINC00963-220ENST00000625171 RNF225M0QZC1 329 aaPredicted RBP12.76□□□□□ -0.37
LINC00963-220ENST00000625171 ZNF500O60304 480 aaPredicted RBP12.76□□□□□ -0.37
LINC00963-220ENST00000625171 EVI5O60447 810 aa12.76□□□□□ -0.37
LINC00963-220ENST00000625171 IL18RAPO95256 599 aa12.76□□□□□ -0.37
LINC00963-220ENST00000625171 C4BPAP04003 597 aaKnown RBP12.76□□□□□ -0.37
LINC00963-220ENST00000625171 CDK7P50613 346 aa12.76□□□□□ -0.37
LINC00963-220ENST00000625171 DLG4P78352 724 aa12.76□□□□□ -0.37
LINC00963-220ENST00000625171 ZNF200P98182 395 aaPredicted RBP12.76□□□□□ -0.37
LINC00963-220ENST00000625171 KIZQ2M2Z5 673 aa12.76□□□□□ -0.37
LINC00963-220ENST00000625171 DCAF4L1Q3SXM0 396 aa12.76□□□□□ -0.37
LINC00963-220ENST00000625171 ZACNQ401N2 412 aa12.76□□□□□ -0.37
LINC00963-220ENST00000625171 CBWD6Q4V339 395 aa12.76□□□□□ -0.37
LINC00963-220ENST00000625171 DCAF17Q5H9S7 520 aaPredicted RBP12.76□□□□□ -0.37
LINC00963-220ENST00000625171 CBWD3Q5JTY5 395 aa12.76□□□□□ -0.37
LINC00963-220ENST00000625171 CBWD5Q5RIA9 395 aa12.76□□□□□ -0.37
LINC00963-220ENST00000625171 USP38Q8NB14 1042 aa12.76□□□□□ -0.37
LINC00963-220ENST00000625171 ZSWIM2Q8NEG5 633 aa12.76□□□□□ -0.37
LINC00963-220ENST00000625171 BAG1Q99933 345 aaPredicted RBP12.76□□□□□ -0.37
LINC00963-220ENST00000625171 TCHPQ9BT92 498 aa12.76□□□□□ -0.37
LINC00963-220ENST00000625171 TRAIPQ9BWF2 469 aa12.76□□□□□ -0.37
LINC00963-220ENST00000625171 TMEM117Q9H0C3 514 aa12.76□□□□□ -0.37
LINC00963-220ENST00000625171 CDT1Q9H211 546 aa12.76□□□□□ -0.37
LINC00963-220ENST00000625171 PDZD7Q9H5P4 517 aa12.76□□□□□ -0.37
LINC00963-220ENST00000625171 ASB7Q9H672 318 aa12.76□□□□□ -0.37
LINC00963-220ENST00000625171 PLEKHA5Q9HAU0 1116 aa12.76□□□□□ -0.37
LINC00963-220ENST00000625171 SIX2Q9NPC8 291 aa12.76□□□□□ -0.37
LINC00963-220ENST00000625171 CHST12Q9NRB3 414 aa12.76□□□□□ -0.37
LINC00963-220ENST00000625171 GOLGA8IPA6NC78 632 aa12.75□□□□□ -0.37
LINC00963-220ENST00000625171 GOLGA8JA6NMD2 632 aa12.75□□□□□ -0.37
LINC00963-220ENST00000625171 B4GALT5O43286 388 aa12.75□□□□□ -0.37
LINC00963-220ENST00000625171 ERLIN2O94905 339 aa12.75□□□□□ -0.37
LINC00963-220ENST00000625171 UCHL3P15374 230 aa12.75□□□□□ -0.37
LINC00963-220ENST00000625171 SLC9A1P19634 815 aa12.75□□□□□ -0.37
LINC00963-220ENST00000625171 MXI1P50539 228 aa12.75□□□□□ -0.37
LINC00963-220ENST00000625171 ADKP55263 362 aaKnown RBP12.75□□□□□ -0.37
LINC00963-220ENST00000625171 MRPS6P82932 125 aaKnown RBP12.75□□□□□ -0.37
LINC00963-220ENST00000625171 MGAT3Q09327 533 aa12.75□□□□□ -0.37
LINC00963-220ENST00000625171 TSR1Q2NL82 804 aaKnown RBP12.75□□□□□ -0.37
LINC00963-220ENST00000625171 TRIM71Q2Q1W2 868 aaKnown RBP12.75□□□□□ -0.37
LINC00963-220ENST00000625171 C1orf53Q5VUE5 145 aa12.75□□□□□ -0.37
LINC00963-220ENST00000625171 NOTUMQ6P988 496 aa12.75□□□□□ -0.37
LINC00963-220ENST00000625171 SLC27A1Q6PCB7 646 aa12.75□□□□□ -0.37
LINC00963-220ENST00000625171 TRIM65Q6PJ69 517 aa12.75□□□□□ -0.37
LINC00963-220ENST00000625171 CYP26C1Q6V0L0 522 aa12.75□□□□□ -0.37
LINC00963-220ENST00000625171 SV2AQ7L0J3 742 aa12.75□□□□□ -0.37
LINC00963-220ENST00000625171 WDR49Q8IV35 697 aa12.75□□□□□ -0.37
LINC00963-220ENST00000625171 CCDC155Q8N6L0 562 aa12.75□□□□□ -0.37
LINC00963-220ENST00000625171 FBXL13Q8NEE6 735 aa12.75□□□□□ -0.37
LINC00963-220ENST00000625171 JAKMIP2Q96AA8 810 aa12.75□□□□□ -0.37
LINC00963-220ENST00000625171 FNBP1Q96RU3 617 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms