RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 UNQ6494/PRO21346Q6UXR6 183 aa4.29□□□□□ -1.72
CDKL5-208ENST00000624953 ARHGEF18Q6ZSZ5 1173 aa4.29□□□□□ -1.72
CDKL5-208ENST00000624953 CLEC14AQ86T13 490 aa4.29□□□□□ -1.72
CDKL5-208ENST00000624953 IFNL2Q8IZJ0 200 aa4.29□□□□□ -1.72
CDKL5-208ENST00000624953 RTF1Q92541 710 aaKnown RBP4.29□□□□□ -1.72
CDKL5-208ENST00000624953 SLC5A5Q92911 643 aa4.29□□□□□ -1.72
CDKL5-208ENST00000624953 MYL10Q9BUA6 226 aa4.29□□□□□ -1.72
CDKL5-208ENST00000624953 KIAA1683Q9H0B3 1180 aa4.29□□□□□ -1.72
CDKL5-208ENST00000624953 OR10A2Q9H208 303 aa4.29□□□□□ -1.72
CDKL5-208ENST00000624953 MS4A5Q9H3V2 200 aa4.29□□□□□ -1.72
CDKL5-208ENST00000624953 IFT22Q9H7X7 185 aa4.29□□□□□ -1.72
CDKL5-208ENST00000624953 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.29□□□□□ -1.72
CDKL5-208ENST00000624953 JADE2Q9NQC1 790 aa4.29□□□□□ -1.72
CDKL5-208ENST00000624953 TOMM22Q9NS69 142 aa4.29□□□□□ -1.72
CDKL5-208ENST00000624953 IFT57Q9NWB7 429 aa4.29□□□□□ -1.72
CDKL5-208ENST00000624953 APOBEC2Q9Y235 224 aaKnown RBP4.29□□□□□ -1.72
CDKL5-208ENST00000624953 KIF20BQ96Q89 1820 aa4.29□□□□□ -1.72
CDKL5-208ENST00000624953 ANKRD26Q9UPS8 1709 aa4.29□□□□□ -1.72
CDKL5-208ENST00000624953 BRD4O60885 1362 aaPredicted RBP4.28□□□□□ -1.72
CDKL5-208ENST00000624953 MTSS1O43312 755 aa4.28□□□□□ -1.72
CDKL5-208ENST00000624953 B4GALT4O60513 344 aa4.28□□□□□ -1.72
CDKL5-208ENST00000624953 HMGCRP04035 888 aa4.28□□□□□ -1.72
CDKL5-208ENST00000624953 LSP1P33241 339 aa4.28□□□□□ -1.72
CDKL5-208ENST00000624953 SOX5P35711 763 aa4.28□□□□□ -1.72
CDKL5-208ENST00000624953 ADCY8P40145 1251 aa4.28□□□□□ -1.72
CDKL5-208ENST00000624953 ID4P47928 161 aa4.28□□□□□ -1.72
CDKL5-208ENST00000624953 MRE11P49959 708 aa4.28□□□□□ -1.72
CDKL5-208ENST00000624953 KCNQ1P51787 676 aa4.28□□□□□ -1.72
CDKL5-208ENST00000624953 MANFP55145 182 aaKnown RBP4.28□□□□□ -1.72
CDKL5-208ENST00000624953 MAP3K12Q12852 859 aa4.28□□□□□ -1.72
CDKL5-208ENST00000624953 TAF7LQ5H9L4 462 aa4.28□□□□□ -1.72
CDKL5-208ENST00000624953 TOM1L2Q6ZVM7 507 aa4.28□□□□□ -1.72
CDKL5-208ENST00000624953 USP30Q70CQ3 517 aa4.28□□□□□ -1.72
CDKL5-208ENST00000624953 ARHGEF25Q86VW2 580 aa4.28□□□□□ -1.72
CDKL5-208ENST00000624953 RASSF3Q86WH2 238 aa4.28□□□□□ -1.72
CDKL5-208ENST00000624953 CXorf67Q86X51 503 aaPredicted RBP4.28□□□□□ -1.72
CDKL5-208ENST00000624953 CLRN3Q8NCR9 226 aa4.28□□□□□ -1.72
CDKL5-208ENST00000624953 LEO1Q8WVC0 666 aaPredicted RBP4.28□□□□□ -1.72
CDKL5-208ENST00000624953 LPPQ93052 612 aa4.28□□□□□ -1.72
CDKL5-208ENST00000624953 NEIL1Q96FI4 390 aaPredicted RBP4.28□□□□□ -1.72
CDKL5-208ENST00000624953 BDH2Q9BUT1 245 aa4.28□□□□□ -1.72
CDKL5-208ENST00000624953 OSBPL6Q9BZF3 934 aa4.28□□□□□ -1.72
CDKL5-208ENST00000624953 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.28□□□□□ -1.72
CDKL5-208ENST00000624953 OAZ3Q9UMX2 235 aa4.28□□□□□ -1.72
CDKL5-208ENST00000624953 ZNF831Q5JPB2 1677 aa4.28□□□□□ -1.72
CDKL5-208ENST00000624953 MEGF6O75095 1541 aa4.27□□□□□ -1.73
CDKL5-208ENST00000624953 LCHNA4D1U4 455 aa4.27□□□□□ -1.73
CDKL5-208ENST00000624953 BRINP1O60477 761 aa4.27□□□□□ -1.73
CDKL5-208ENST00000624953 ADRB1P08588 477 aa4.27□□□□□ -1.73
CDKL5-208ENST00000624953 ADCY7P51828 1080 aa4.27□□□□□ -1.73
CDKL5-208ENST00000624953 SESN2P58004 480 aaPredicted RBP4.27□□□□□ -1.73
CDKL5-208ENST00000624953 ADAM17P78536 824 aa4.27□□□□□ -1.73
CDKL5-208ENST00000624953 ADCY2Q08462 1091 aa4.27□□□□□ -1.73
CDKL5-208ENST00000624953 ICAM4Q14773 271 aa4.27□□□□□ -1.73
CDKL5-208ENST00000624953 PDCD1Q15116 288 aa4.27□□□□□ -1.73
CDKL5-208ENST00000624953 DGKDQ16760 1214 aa4.27□□□□□ -1.73
CDKL5-208ENST00000624953 CCDC178Q5BJE1 867 aa4.27□□□□□ -1.73
CDKL5-208ENST00000624953 BROXQ5VW32 411 aa4.27□□□□□ -1.73
CDKL5-208ENST00000624953 TCTN3Q6NUS6 607 aa4.27□□□□□ -1.73
CDKL5-208ENST00000624953 KLHDC10Q6PID8 442 aa4.27□□□□□ -1.73
CDKL5-208ENST00000624953 Q6ZSN1 163 aa4.27□□□□□ -1.73
CDKL5-208ENST00000624953 LHFPL2Q6ZUX7 228 aa4.27□□□□□ -1.73
CDKL5-208ENST00000624953 DDX46Q7L014 1031 aaKnown RBP4.27□□□□□ -1.73
CDKL5-208ENST00000624953 LIMS2Q7Z4I7 341 aa4.27□□□□□ -1.73
CDKL5-208ENST00000624953 GPR135Q8IZ08 494 aa4.27□□□□□ -1.73
CDKL5-208ENST00000624953 C7orf31Q8N865 590 aa4.27□□□□□ -1.73
CDKL5-208ENST00000624953 CHAC2Q8WUX2 184 aa4.27□□□□□ -1.73
CDKL5-208ENST00000624953 GPR101Q96P66 508 aaPredicted RBP4.27□□□□□ -1.73
CDKL5-208ENST00000624953 FDXACB1Q9BRP7 624 aaPredicted RBP4.27□□□□□ -1.73
CDKL5-208ENST00000624953 ENKD1Q9H0I2 346 aa4.27□□□□□ -1.73
CDKL5-208ENST00000624953 TMPRSS5Q9H3S3 457 aa4.27□□□□□ -1.73
CDKL5-208ENST00000624953 POFUT1Q9H488 388 aa4.27□□□□□ -1.73
CDKL5-208ENST00000624953 MTG2Q9H4K7 406 aa4.27□□□□□ -1.73
CDKL5-208ENST00000624953 PRDM12Q9H4Q4 367 aa4.27□□□□□ -1.73
CDKL5-208ENST00000624953 POLR3BQ9NW08 1133 aaPredicted RBP4.27□□□□□ -1.73
CDKL5-208ENST00000624953 CDC42EP3Q9UKI2 254 aa4.27□□□□□ -1.73
CDKL5-208ENST00000624953 ZDHHC9Q9Y397 364 aa4.27□□□□□ -1.73
CDKL5-208ENST00000624953 PPP2R3BQ9Y5P8 575 aa4.27□□□□□ -1.73
CDKL5-208ENST00000624953 NUMBLQ9Y6R0 609 aa4.27□□□□□ -1.73
CDKL5-208ENST00000624953 CCDC7Q96M83 1385 aa4.27□□□□□ -1.73
CDKL5-208ENST00000624953 SBNO2Q9Y2G9 1366 aa4.27□□□□□ -1.73
CDKL5-208ENST00000624953 FER1L6Q2WGJ9 1857 aa4.26□□□□□ -1.73
CDKL5-208ENST00000624953 ANKRD31Q8N7Z5 1873 aa4.26□□□□□ -1.73
CDKL5-208ENST00000624953 MYPNQ86TC9 1320 aa4.26□□□□□ -1.73
CDKL5-208ENST00000624953 C2orf78A6NCI8 922 aa4.26□□□□□ -1.73
CDKL5-208ENST00000624953 GPR39O43194 453 aa4.26□□□□□ -1.73
CDKL5-208ENST00000624953 FOXS1O43638 330 aa4.26□□□□□ -1.73
CDKL5-208ENST00000624953 RAD17O75943 681 aa4.26□□□□□ -1.73
CDKL5-208ENST00000624953 MAGEA10P43363 369 aaPredicted RBP4.26□□□□□ -1.73
CDKL5-208ENST00000624953 GPR15P49685 360 aa4.26□□□□□ -1.73
CDKL5-208ENST00000624953 STAT5BP51692 787 aa4.26□□□□□ -1.73
CDKL5-208ENST00000624953 SESN3P58005 492 aa4.26□□□□□ -1.73
CDKL5-208ENST00000624953 STAT4Q14765 748 aa4.26□□□□□ -1.73
CDKL5-208ENST00000624953 INAVAQ3KP66 663 aa4.26□□□□□ -1.73
CDKL5-208ENST00000624953 SPATS1Q496A3 300 aa4.26□□□□□ -1.73
CDKL5-208ENST00000624953 GAGE13Q4V321 117 aa4.26□□□□□ -1.73
CDKL5-208ENST00000624953 FRMD7Q6ZUT3 714 aa4.26□□□□□ -1.73
CDKL5-208ENST00000624953 OTOP2Q7RTS6 562 aa4.26□□□□□ -1.73
CDKL5-208ENST00000624953 FILIP1Q7Z7B0 1213 aa4.26□□□□□ -1.73
CDKL5-208ENST00000624953 ADGRE4PQ86SQ3 457 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms