RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 CEP68Q76N32 757 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 MYCBPAPQ8TBZ2 947 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 STK32AQ8WU08 396 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 PGBD4Q96DM1 585 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 HAUS8Q9BT25 410 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 TRIM10Q9UDY6 481 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 SFI1A8K8P3 1242 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 IFIT3O14879 490 aaKnown RBP9.79□□□□□ -0.84
USB1-216ENST00000624720 SNPHO15079 494 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 ATP2C2O75185 946 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 CRYZL1O95825 349 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 FAM107AO95990 144 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 GNRH1P01148 92 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 PTPN2P17706 415 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 GALK1P51570 392 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 HSD17B4P51659 736 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 GNG11P61952 73 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 GUCY2DQ02846 1103 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 NFX1Q12986 1120 aaKnown RBP9.79□□□□□ -0.84
USB1-216ENST00000624720 ANO4Q32M45 955 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 KRT71Q3SY84 523 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 HABP4Q5JVS0 413 aaKnown RBP9.79□□□□□ -0.84
USB1-216ENST00000624720 SLC10A5Q5PT55 438 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 NCAPH2Q6IBW4 605 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 CATSPER4Q7RTX7 472 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 NLRP14Q86W24 1093 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 MAPKAPK5Q8IW41 473 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 SLC44A5Q8NCS7 719 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 EXD1Q8NHP7 514 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 NCOA7Q8NI08 942 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 COG1Q8WTW3 980 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 DYNLL2Q96FJ2 89 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 TSGA13Q96PP4 275 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 TIPINQ9BVW5 301 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 ATP13A3Q9H7F0 1226 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 SH3GLB2Q9NR46 395 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 ATP8A2Q9NTI2 1148 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 IMPACTQ9P2X3 320 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 TLDC2A0PJX2 215 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 PTPDC1A2A3K4 754 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 POLR3DP05423 398 aaPredicted RBP9.79□□□□□ -0.84
USB1-216ENST00000624720 USP17L8P0C7I0 530 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 RHOXF2BP0C7M4 288 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 GHRP10912 638 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 KRT20P35900 424 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 CACNB3P54284 484 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 SEMA3AQ14563 771 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 STILQ15468 1287 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 TAF12Q16514 161 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 TMEM259Q4ZIN3 620 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 PPP1R21Q6ZMI0 780 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 DDX42Q86XP3 938 aaKnown RBP eCLIP9.79□□□□□ -0.84
USB1-216ENST00000624720 STON2Q8WXE9 905 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 ARL8AQ96BM9 186 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 DHX58Q96C10 678 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 NRBF2Q96F24 287 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 LPIN3Q9BQK8 851 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 RHOXF2Q9BQY4 288 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 PPP1R12CQ9BZL4 782 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 TMEM206Q9H813 350 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.79□□□□□ -0.84
USB1-216ENST00000624720 NDUFA13Q9P0J0 144 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 ZSWIM5Q9P217 1185 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 GGA1Q9UJY5 639 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 VANGL2Q9ULK5 521 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 TTF2Q9UNY4 1162 aaKnown RBP9.79□□□□□ -0.84
USB1-216ENST00000624720 PNPLA7Q6ZV29 1317 aa9.79□□□□□ -0.84
USB1-216ENST00000624720 WDR33Q9C0J8 1336 aaKnown RBP9.79□□□□□ -0.84
USB1-216ENST00000624720 CFAP73A6NFT4 308 aa9.78□□□□□ -0.84
USB1-216ENST00000624720 A8MX80 341 aa9.78□□□□□ -0.84
USB1-216ENST00000624720 CASQ2O14958 399 aaPredicted RBP9.78□□□□□ -0.84
USB1-216ENST00000624720 XPOTO43592 962 aaKnown RBP9.78□□□□□ -0.84
USB1-216ENST00000624720 CUTAO60888 179 aa9.78□□□□□ -0.84
USB1-216ENST00000624720 LMNAP02545 664 aaKnown RBP9.78□□□□□ -0.84
USB1-216ENST00000624720 KDSRQ06136 332 aa9.78□□□□□ -0.84
USB1-216ENST00000624720 STK38Q15208 465 aa9.78□□□□□ -0.84
USB1-216ENST00000624720 UBE3CQ15386 1083 aa9.78□□□□□ -0.84
USB1-216ENST00000624720 IFI16Q16666 785 aaKnown RBP9.78□□□□□ -0.84
USB1-216ENST00000624720 TMEM67Q5HYA8 995 aa9.78□□□□□ -0.84
USB1-216ENST00000624720 TRIM67Q6ZTA4 783 aa9.78□□□□□ -0.84
USB1-216ENST00000624720 ATL1Q8WXF7 558 aa9.78□□□□□ -0.84
USB1-216ENST00000624720 SAMD11Q96NU1 681 aa9.78□□□□□ -0.84
USB1-216ENST00000624720 TM6SF1Q9BZW5 370 aa9.78□□□□□ -0.84
USB1-216ENST00000624720 FANCEQ9HB96 536 aa9.78□□□□□ -0.84
USB1-216ENST00000624720 MCM9Q9NXL9 1143 aa9.78□□□□□ -0.84
USB1-216ENST00000624720 EDARQ9UNE0 448 aa9.78□□□□□ -0.84
USB1-216ENST00000624720 DNAJC16Q9Y2G8 782 aa9.78□□□□□ -0.84
USB1-216ENST00000624720 PCDHAC2Q9Y5I4 1007 aa9.78□□□□□ -0.84
USB1-216ENST00000624720 NHSQ6T4R5 1651 aa9.78□□□□□ -0.84
USB1-216ENST00000624720 GUCY1B2O75343 617 aa9.78□□□□□ -0.84
USB1-216ENST00000624720 ABCB1P08183 1280 aaPredicted RBP9.78□□□□□ -0.84
USB1-216ENST00000624720 PDIA3P30101 505 aaKnown RBP9.78□□□□□ -0.84
USB1-216ENST00000624720 UBA7P41226 1012 aa9.78□□□□□ -0.84
USB1-216ENST00000624720 PLCD1P51178 756 aa9.78□□□□□ -0.84
USB1-216ENST00000624720 CCR3P51677 355 aa9.78□□□□□ -0.84
USB1-216ENST00000624720 ARFIP2P53365 341 aa9.78□□□□□ -0.84
USB1-216ENST00000624720 POLR2GP62487 172 aaKnown RBP eCLIP9.78□□□□□ -0.84
USB1-216ENST00000624720 FAPQ12884 760 aa9.78□□□□□ -0.84
USB1-216ENST00000624720 CYLC2Q14093 348 aaPredicted RBP9.78□□□□□ -0.84
USB1-216ENST00000624720 MFSD14BQ5SR56 506 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms