RNA–Protein interactions for RNA: ENST00000624138.3

LINC00963-218, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 261 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-218ENST00000624138 ITGA4P13612 1032 aa8.12□□□□□ -1.11
LINC00963-218ENST00000624138 SFNP31947 248 aa8.12□□□□□ -1.11
LINC00963-218ENST00000624138 RING1Q06587 406 aa8.12□□□□□ -1.11
LINC00963-218ENST00000624138 FUT2Q10981 343 aa8.12□□□□□ -1.11
LINC00963-218ENST00000624138 SRSF5Q13243 272 aaKnown RBP8.12□□□□□ -1.11
LINC00963-218ENST00000624138 SF3A2Q15428 464 aaKnown RBP8.12□□□□□ -1.11
LINC00963-218ENST00000624138 MTERF2Q49AM1 385 aa8.12□□□□□ -1.11
LINC00963-218ENST00000624138 XKR3Q5GH77 459 aa8.12□□□□□ -1.11
LINC00963-218ENST00000624138 PLA2G2CQ5R387 149 aa8.12□□□□□ -1.11
LINC00963-218ENST00000624138 JAKMIP3Q5VZ66 844 aa8.12□□□□□ -1.11
LINC00963-218ENST00000624138 CASC1Q6TDU7 716 aa8.12□□□□□ -1.11
LINC00963-218ENST00000624138 PRSS55Q6UWB4 352 aaPredicted RBP8.12□□□□□ -1.11
LINC00963-218ENST00000624138 NFXL1Q6ZNB6 911 aa8.12□□□□□ -1.11
LINC00963-218ENST00000624138 RTL10Q7L3V2 364 aa8.12□□□□□ -1.11
LINC00963-218ENST00000624138 SRGAP1Q7Z6B7 1085 aa8.12□□□□□ -1.11
LINC00963-218ENST00000624138 SMC5Q8IY18 1101 aa8.12□□□□□ -1.11
LINC00963-218ENST00000624138 SPEM1Q8N4L4 309 aa8.12□□□□□ -1.11
LINC00963-218ENST00000624138 GSTCDQ8NEC7 633 aa8.12□□□□□ -1.11
LINC00963-218ENST00000624138 LNX1Q8TBB1 728 aaPredicted RBP8.12□□□□□ -1.11
LINC00963-218ENST00000624138 FAM3CQ92520 227 aa8.12□□□□□ -1.11
LINC00963-218ENST00000624138 LENG9Q96B70 501 aa8.12□□□□□ -1.11
LINC00963-218ENST00000624138 LOXL4Q96JB6 756 aa8.12□□□□□ -1.11
LINC00963-218ENST00000624138 GAD1Q99259 594 aa8.12□□□□□ -1.11
LINC00963-218ENST00000624138 RNF39Q9H2S5 420 aa8.12□□□□□ -1.11
LINC00963-218ENST00000624138 MINDY3Q9H8M7 445 aa8.12□□□□□ -1.11
LINC00963-218ENST00000624138 AVENQ9NQS1 362 aaPredicted RBP8.12□□□□□ -1.11
LINC00963-218ENST00000624138 HCFC1R1Q9NWW0 138 aa8.12□□□□□ -1.11
LINC00963-218ENST00000624138 BARHL2Q9NY43 387 aa8.12□□□□□ -1.11
LINC00963-218ENST00000624138 TNRC6BQ9UPQ9 1833 aaKnown RBP8.11□□□□□ -1.11
LINC00963-218ENST00000624138 AXIN1O15169 862 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 PRC1O43663 620 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 EDIL3O43854 480 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 FCARP24071 287 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 HOXA6P31267 233 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 MCM5P33992 734 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 MLH1P40692 756 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 RAP1GAPP47736 663 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 SCNN1GP51170 649 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 JAK3P52333 1124 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 MLLT6P55198 1093 aaPredicted RBP8.11□□□□□ -1.11
LINC00963-218ENST00000624138 PTGDRQ13258 359 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 PABPC1LQ4VXU2 614 aaKnown RBP8.11□□□□□ -1.11
LINC00963-218ENST00000624138 PRR16Q569H4 304 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 RTP2Q5QGT7 225 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 AXDND1Q5T1B0 1012 aaPredicted RBP8.11□□□□□ -1.11
LINC00963-218ENST00000624138 LIN9Q5TKA1 542 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 SGMS1Q86VZ5 419 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 CHD1LQ86WJ1 897 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 RAB11FIP4Q86YS3 637 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 MAP4K3Q8IVH8 894 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 C12orf50Q8NA57 414 aaPredicted RBP8.11□□□□□ -1.11
LINC00963-218ENST00000624138 RDM1Q8NG50 284 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 PIK3R5Q8WYR1 880 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 GATA6Q92908 595 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 IRF7Q92985 503 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 MCRS1Q96EZ8 462 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 ZFP42Q96MM3 310 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 NLRP4Q96MN2 994 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 RIT2Q99578 217 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 ARRDC1-AS1Q9H2J1 176 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 BRD9Q9H8M2 597 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 ZNF334Q9HCZ1 680 aaPredicted RBP8.11□□□□□ -1.11
LINC00963-218ENST00000624138 SEPT9Q9UHD8 586 aaPredicted RBP8.11□□□□□ -1.11
LINC00963-218ENST00000624138 POLIQ9UNA4 740 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 LHX6Q9UPM6 363 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 GIT1Q9Y2X7 761 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 IPPQ9Y573 584 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 SLC12A7Q9Y666 1083 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 ADAMTS9Q9P2N4 1935 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 PLXNB3Q9ULL4 1909 aa8.11□□□□□ -1.11
LINC00963-218ENST00000624138 TMEM150BA6NC51 233 aa8.1□□□□□ -1.11
LINC00963-218ENST00000624138 ADAMTS3O15072 1205 aa8.1□□□□□ -1.11
LINC00963-218ENST00000624138 MSH4O15457 936 aa8.1□□□□□ -1.11
LINC00963-218ENST00000624138 TADA2AO75478 443 aa8.1□□□□□ -1.11
LINC00963-218ENST00000624138 EPN2O95208 641 aa8.1□□□□□ -1.11
LINC00963-218ENST00000624138 AXLP30530 894 aa8.1□□□□□ -1.11
LINC00963-218ENST00000624138 RAB33AQ14088 237 aa8.1□□□□□ -1.11
LINC00963-218ENST00000624138 SLC5A9Q2M3M2 681 aa8.1□□□□□ -1.11
LINC00963-218ENST00000624138 PSAPL1Q6NUJ1 521 aa8.1□□□□□ -1.11
LINC00963-218ENST00000624138 B3GNT9Q6UX72 402 aa8.1□□□□□ -1.11
LINC00963-218ENST00000624138 CEP68Q76N32 757 aa8.1□□□□□ -1.11
LINC00963-218ENST00000624138 WDR5BQ86VZ2 330 aa8.1□□□□□ -1.11
LINC00963-218ENST00000624138 EXOC6Q8TAG9 804 aa8.1□□□□□ -1.11
LINC00963-218ENST00000624138 SLC7A14Q8TBB6 771 aa8.1□□□□□ -1.11
LINC00963-218ENST00000624138 ING5Q8WYH8 240 aa8.1□□□□□ -1.11
LINC00963-218ENST00000624138 SLC5A5Q92911 643 aa8.1□□□□□ -1.11
LINC00963-218ENST00000624138 JPH2Q9BR39 696 aaPredicted RBP8.1□□□□□ -1.11
LINC00963-218ENST00000624138 SH2D3AQ9BRG2 576 aa8.1□□□□□ -1.11
LINC00963-218ENST00000624138 TTPALQ9BTX7 342 aa8.1□□□□□ -1.11
LINC00963-218ENST00000624138 TRMT61BQ9BVS5 477 aaKnown RBP8.1□□□□□ -1.11
LINC00963-218ENST00000624138 EIF2AQ9BY44 585 aaKnown RBP8.1□□□□□ -1.11
LINC00963-218ENST00000624138 ADAM33Q9BZ11 813 aa8.1□□□□□ -1.11
LINC00963-218ENST00000624138 UNC45AQ9H3U1 944 aa8.1□□□□□ -1.11
LINC00963-218ENST00000624138 RBM28Q9NW13 759 aaKnown RBP8.1□□□□□ -1.11
LINC00963-218ENST00000624138 MRPS23Q9Y3D9 190 aaKnown RBP8.1□□□□□ -1.11
LINC00963-218ENST00000624138 COL4A3BPQ9Y5P4 624 aa8.1□□□□□ -1.11
LINC00963-218ENST00000624138 V9GY48 417 aaPredicted RBP8.1□□□□□ -1.11
LINC00963-218ENST00000624138 ZMYM2Q9UBW7 1377 aa8.1□□□□□ -1.11
LINC00963-218ENST00000624138 LAMA5O15230 3695 aa8.09□□□□□ -1.11
LINC00963-218ENST00000624138 SF3B1O75533 1304 aaKnown RBP eCLIP8.09□□□□□ -1.118e-6■■■■■ 107
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms