RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 PEX26Q7Z412 305 aa13.32□□□□□ -0.28
LITAF-221ENST00000622633 KSR1Q8IVT5 923 aa13.32□□□□□ -0.28
LITAF-221ENST00000622633 ARFGAP2Q8N6H7 521 aa13.32□□□□□ -0.28
LITAF-221ENST00000622633 PTPRN2Q92932 1015 aa13.32□□□□□ -0.28
LITAF-221ENST00000622633 CARD9Q9H257 536 aa13.32□□□□□ -0.28
LITAF-221ENST00000622633 PLAAQ9Y263 795 aa13.32□□□□□ -0.28
LITAF-221ENST00000622633 TMED5Q9Y3A6 229 aa13.32□□□□□ -0.28
LITAF-221ENST00000622633 N6AMT1Q9Y5N5 214 aa13.32□□□□□ -0.28
LITAF-221ENST00000622633 CES2O00748 559 aa13.31□□□□□ -0.28
LITAF-221ENST00000622633 EYA4O95677 639 aa13.31□□□□□ -0.28
LITAF-221ENST00000622633 HNRNPCP07910 306 aaKnown RBP eCLIP13.31□□□□□ -0.28
LITAF-221ENST00000622633 NMT1P30419 496 aaKnown RBP13.31□□□□□ -0.28
LITAF-221ENST00000622633 BMT2Q1RMZ1 405 aa13.31□□□□□ -0.28
LITAF-221ENST00000622633 ZC2HC1CQ53FD0 456 aaPredicted RBP13.31□□□□□ -0.28
LITAF-221ENST00000622633 RINT1Q6NUQ1 792 aa13.31□□□□□ -0.28
LITAF-221ENST00000622633 TMEM53Q6P2H8 277 aa13.31□□□□□ -0.28
LITAF-221ENST00000622633 RUFY4Q6ZNE9 571 aa13.31□□□□□ -0.28
LITAF-221ENST00000622633 SEPT12Q8IYM1 358 aa13.31□□□□□ -0.28
LITAF-221ENST00000622633 CXorf38Q8TB03 319 aa13.31□□□□□ -0.28
LITAF-221ENST00000622633 ACTRT1Q8TDG2 376 aa13.31□□□□□ -0.28
LITAF-221ENST00000622633 PPP2R3CQ969Q6 453 aa13.31□□□□□ -0.28
LITAF-221ENST00000622633 PPP1R14BQ96C90 147 aa13.31□□□□□ -0.28
LITAF-221ENST00000622633 ZNF653Q96CK0 615 aa13.31□□□□□ -0.28
LITAF-221ENST00000622633 NR1H4Q96RI1 486 aaPredicted RBP13.31□□□□□ -0.28
LITAF-221ENST00000622633 SRPK1Q96SB4 655 aaKnown RBP13.31□□□□□ -0.28
LITAF-221ENST00000622633 DDX47Q9H0S4 455 aaKnown RBP13.31□□□□□ -0.28
LITAF-221ENST00000622633 CHMP2BQ9UQN3 213 aa13.31□□□□□ -0.28
LITAF-221ENST00000622633 SLC4A7Q9Y6M7 1214 aa13.31□□□□□ -0.28
LITAF-221ENST00000622633 FOSP01100 380 aaPredicted RBP13.31□□□□□ -0.28
LITAF-221ENST00000622633 GSTA2P09210 222 aa13.31□□□□□ -0.28
LITAF-221ENST00000622633 PAEPP09466 180 aa13.31□□□□□ -0.28
LITAF-221ENST00000622633 NAT2P11245 290 aa13.31□□□□□ -0.28
LITAF-221ENST00000622633 ITGA4P13612 1032 aa13.31□□□□□ -0.28
LITAF-221ENST00000622633 NCALDP61601 193 aa13.31□□□□□ -0.28
LITAF-221ENST00000622633 SULT2A1Q06520 285 aa13.31□□□□□ -0.28
LITAF-221ENST00000622633 ZNF362Q5T0B9 420 aaPredicted RBP13.31□□□□□ -0.28
LITAF-221ENST00000622633 RBM26Q5T8P6 1007 aaKnown RBP13.31□□□□□ -0.28
LITAF-221ENST00000622633 CPLX4Q7Z7G2 160 aa13.31□□□□□ -0.28
LITAF-221ENST00000622633 TPH2Q8IWU9 490 aa13.31□□□□□ -0.28
LITAF-221ENST00000622633 MYCT1Q8N699 235 aa13.31□□□□□ -0.28
LITAF-221ENST00000622633 UCMAQ8WVF2 138 aa13.31□□□□□ -0.28
LITAF-221ENST00000622633 FAM136AQ96C01 138 aa13.31□□□□□ -0.28
LITAF-221ENST00000622633 ISCUQ9H1K1 167 aa13.31□□□□□ -0.28
LITAF-221ENST00000622633 NENFQ9UMX5 172 aa13.31□□□□□ -0.28
LITAF-221ENST00000622633 NOC2LQ9Y3T9 749 aaKnown RBP13.31□□□□□ -0.28
LITAF-221ENST00000622633 PGRMC1O00264 195 aaKnown RBP13.3□□□□□ -0.28
LITAF-221ENST00000622633 SLC16A3O15427 465 aaKnown RBP13.3□□□□□ -0.28
LITAF-221ENST00000622633 P4HA2O15460 535 aa13.3□□□□□ -0.28
LITAF-221ENST00000622633 SART1O43290 800 aaKnown RBP13.3□□□□□ -0.28
LITAF-221ENST00000622633 CHMP2AO43633 222 aa13.3□□□□□ -0.28
LITAF-221ENST00000622633 FAM13AO94988 1023 aa13.3□□□□□ -0.28
LITAF-221ENST00000622633 KRT16P08779 473 aa13.3□□□□□ -0.28
LITAF-221ENST00000622633 ZBTB48P10074 688 aaPredicted RBP13.3□□□□□ -0.28
LITAF-221ENST00000622633 ECHS1P30084 290 aa13.3□□□□□ -0.28
LITAF-221ENST00000622633 CIITAP33076 1130 aa13.3□□□□□ -0.28
LITAF-221ENST00000622633 HSPA9P38646 679 aaKnown RBP13.3□□□□□ -0.28
LITAF-221ENST00000622633 LSAMPQ13449 338 aa13.3□□□□□ -0.28
LITAF-221ENST00000622633 COG2Q14746 738 aa13.3□□□□□ -0.28
LITAF-221ENST00000622633 ABCB5Q2M3G0 1257 aa13.3□□□□□ -0.28
LITAF-221ENST00000622633 MAP7D1Q3KQU3 841 aa13.3□□□□□ -0.28
LITAF-221ENST00000622633 FAM133BQ5BKY9 247 aaKnown RBP13.3□□□□□ -0.28
LITAF-221ENST00000622633 TMEM179Q6ZVK1 233 aa13.3□□□□□ -0.28
LITAF-221ENST00000622633 VPS36Q86VN1 386 aa13.3□□□□□ -0.28
LITAF-221ENST00000622633 CCDC197Q8NCU1 140 aa13.3□□□□□ -0.28
LITAF-221ENST00000622633 NKX1-2Q9UD57 310 aaPredicted RBP13.3□□□□□ -0.28
LITAF-221ENST00000622633 THSD7AQ9UPZ6 1657 aa13.3□□□□□ -0.28
LITAF-221ENST00000622633 LTBP1Q14766 1721 aa13.3□□□□□ -0.28
LITAF-221ENST00000622633 UBAP1LF5GYI3 381 aa13.3□□□□□ -0.28
LITAF-221ENST00000622633 IGF2BP3O00425 579 aaKnown RBP eCLIP13.3□□□□□ -0.285e-7■■□□□ 12.8
LITAF-221ENST00000622633 KRIT1O00522 736 aa13.3□□□□□ -0.28
LITAF-221ENST00000622633 MMEP08473 750 aa13.3□□□□□ -0.28
LITAF-221ENST00000622633 GALCP54803 685 aa13.3□□□□□ -0.28
LITAF-221ENST00000622633 CNPY1Q3B7I2 92 aa13.3□□□□□ -0.28
LITAF-221ENST00000622633 THOC7Q6I9Y2 204 aaKnown RBP13.3□□□□□ -0.28
LITAF-221ENST00000622633 TATDN1Q6P1N9 297 aa13.3□□□□□ -0.28
LITAF-221ENST00000622633 DAAM2Q86T65 1068 aa13.3□□□□□ -0.28
LITAF-221ENST00000622633 ZNF554Q86TJ5 538 aa13.3□□□□□ -0.28
LITAF-221ENST00000622633 FAM186BQ8IYM0 893 aa13.3□□□□□ -0.28
LITAF-221ENST00000622633 OR2W6PQ8NHA6 318 aa13.3□□□□□ -0.28
LITAF-221ENST00000622633 WDR60Q8WVS4 1066 aa13.3□□□□□ -0.28
LITAF-221ENST00000622633 CLMNQ96JQ2 1002 aa13.3□□□□□ -0.28
LITAF-221ENST00000622633 NEUROG2Q9H2A3 272 aa13.3□□□□□ -0.28
LITAF-221ENST00000622633 STXBP5LQ9Y2K9 1186 aa13.3□□□□□ -0.28
LITAF-221ENST00000622633 GREB1LQ9C091 1923 aaPredicted RBP13.29□□□□□ -0.28
LITAF-221ENST00000622633 HTR3EA5X5Y0 456 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 BMP3P12645 472 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 NPR1P16066 1061 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 ACADSP16219 412 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 HSD17B3P37058 310 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 STAT1P42224 750 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 PEX5P50542 639 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 PACS1Q6VY07 963 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 ZNF365Q70YC5 407 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 SLFN11Q7Z7L1 901 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 C14orf80Q86SX3 495 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 CCNJLQ8IV13 435 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 LNX1Q8TBB1 728 aaPredicted RBP13.29□□□□□ -0.28
LITAF-221ENST00000622633 ABHD8Q96I13 439 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 GMCL1Q96IK5 515 aa13.29□□□□□ -0.28
LITAF-221ENST00000622633 DYDC2Q96IM9 177 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms