RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 SREBF1P36956 1147 aa6.07□□□□□ -1.44
BRCA1-229ENST00000621897 MCAMP43121 646 aa6.07□□□□□ -1.44
BRCA1-229ENST00000621897 RNASE9P60153 205 aaKnown RBP6.07□□□□□ -1.44
BRCA1-229ENST00000621897 MALLQ13021 153 aa6.07□□□□□ -1.44
BRCA1-229ENST00000621897 SEPT2Q15019 361 aa6.07□□□□□ -1.44
BRCA1-229ENST00000621897 ANO4Q32M45 955 aa6.07□□□□□ -1.44
BRCA1-229ENST00000621897 FAM47AQ5JRC9 791 aa6.07□□□□□ -1.44
BRCA1-229ENST00000621897 METRNLQ641Q3 311 aa6.07□□□□□ -1.44
BRCA1-229ENST00000621897 PCSK4Q6UW60 755 aa6.07□□□□□ -1.44
BRCA1-229ENST00000621897 LRRC55Q6ZSA7 311 aa6.07□□□□□ -1.44
BRCA1-229ENST00000621897 ZNF572Q7Z3I7 529 aaPredicted RBP6.07□□□□□ -1.44
BRCA1-229ENST00000621897 GDF7Q7Z4P5 450 aa6.07□□□□□ -1.44
BRCA1-229ENST00000621897 ULK2Q8IYT8 1036 aa6.07□□□□□ -1.44
BRCA1-229ENST00000621897 FAM193BQ96PV7 902 aaPredicted RBP6.07□□□□□ -1.44
BRCA1-229ENST00000621897 SLC2A13Q96QE2 648 aa6.07□□□□□ -1.44
BRCA1-229ENST00000621897 NEU1Q99519 415 aa6.07□□□□□ -1.44
BRCA1-229ENST00000621897 LDAHQ9H6V9 325 aa6.07□□□□□ -1.44
BRCA1-229ENST00000621897 RBM12Q9NTZ6 932 aaKnown RBP6.07□□□□□ -1.44
BRCA1-229ENST00000621897 PCDHGA2Q9Y5H1 932 aa6.07□□□□□ -1.44
BRCA1-229ENST00000621897 HS3ST4Q9Y661 456 aa6.07□□□□□ -1.44
BRCA1-229ENST00000621897 SUV39H1O43463 412 aa6.06□□□□□ -1.44
BRCA1-229ENST00000621897 LPXNO60711 386 aa6.06□□□□□ -1.44
BRCA1-229ENST00000621897 NCR1O76036 304 aa6.06□□□□□ -1.44
BRCA1-229ENST00000621897 ITGB1P05556 798 aa6.06□□□□□ -1.44
BRCA1-229ENST00000621897 ALOX15P16050 662 aaPredicted RBP6.06□□□□□ -1.44
BRCA1-229ENST00000621897 INHBCP55103 352 aa6.06□□□□□ -1.44
BRCA1-229ENST00000621897 CRB2Q5IJ48 1285 aa6.06□□□□□ -1.44
BRCA1-229ENST00000621897 MBNL2Q5VZF2 373 aaKnown RBP6.06□□□□□ -1.44
BRCA1-229ENST00000621897 EFCAB12Q6NXP0 572 aa6.06□□□□□ -1.44
BRCA1-229ENST00000621897 PQLC1Q8N2U9 271 aa6.06□□□□□ -1.44
BRCA1-229ENST00000621897 CNTD1Q8N815 330 aa6.06□□□□□ -1.44
BRCA1-229ENST00000621897 OR2I1PQ8NGU4 316 aa6.06□□□□□ -1.44
BRCA1-229ENST00000621897 PROKR1Q8TCW9 393 aa6.06□□□□□ -1.44
BRCA1-229ENST00000621897 MENTQ9BUN1 341 aa6.06□□□□□ -1.44
BRCA1-229ENST00000621897 SLC46A2Q9BY10 475 aa6.06□□□□□ -1.44
BRCA1-229ENST00000621897 SLITRK6Q9H5Y7 841 aa6.06□□□□□ -1.44
BRCA1-229ENST00000621897 POGKQ9P215 609 aa6.06□□□□□ -1.44
BRCA1-229ENST00000621897 CLCA2Q9UQC9 943 aa6.06□□□□□ -1.44
BRCA1-229ENST00000621897 SIK3Q9Y2K2 1263 aa6.06□□□□□ -1.44
BRCA1-229ENST00000621897 SBNO2Q9Y2G9 1366 aa6.06□□□□□ -1.44
BRCA1-229ENST00000621897 WASHC2AQ641Q2 1341 aa6.05□□□□□ -1.44
BRCA1-229ENST00000621897 PNPLA7Q6ZV29 1317 aa6.05□□□□□ -1.44
BRCA1-229ENST00000621897 SLC5A3P53794 718 aa6.05□□□□□ -1.44
BRCA1-229ENST00000621897 KLF1Q13351 362 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-229ENST00000621897 NOMO1Q15155 1222 aa6.05□□□□□ -1.44
BRCA1-229ENST00000621897 PDCD4Q53EL6 469 aaKnown RBP6.05□□□□□ -1.44
BRCA1-229ENST00000621897 FAM102AQ5T9C2 384 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-229ENST00000621897 VRK3Q8IV63 474 aa6.05□□□□□ -1.44
BRCA1-229ENST00000621897 SYNE4Q8N205 404 aa6.05□□□□□ -1.44
BRCA1-229ENST00000621897 STON2Q8WXE9 905 aa6.05□□□□□ -1.44
BRCA1-229ENST00000621897 DCLRE1CQ96SD1 692 aaKnown RBP6.05□□□□□ -1.44
BRCA1-229ENST00000621897 CEP89Q96ST8 783 aa6.05□□□□□ -1.44
BRCA1-229ENST00000621897 UHRF1Q96T88 793 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-229ENST00000621897 SPC25Q9HBM1 224 aa6.05□□□□□ -1.44
BRCA1-229ENST00000621897 SLC5A4Q9NY91 659 aa6.05□□□□□ -1.44
BRCA1-229ENST00000621897 MCM8Q9UJA3 840 aa6.05□□□□□ -1.44
BRCA1-229ENST00000621897 ATP8A1Q9Y2Q0 1164 aa6.05□□□□□ -1.44
BRCA1-229ENST00000621897 WDR33Q9C0J8 1336 aaKnown RBP6.04□□□□□ -1.44
BRCA1-229ENST00000621897 A0A087X1B8 175 aa6.04□□□□□ -1.44
BRCA1-229ENST00000621897 CENPVL1A0A0U1RR11 272 aa6.04□□□□□ -1.44
BRCA1-229ENST00000621897 ABHD16AO95870 558 aa6.04□□□□□ -1.44
BRCA1-229ENST00000621897 GSPT1P15170 499 aaKnown RBP6.04□□□□□ -1.44
BRCA1-229ENST00000621897 FPR1P21462 350 aa6.04□□□□□ -1.44
BRCA1-229ENST00000621897 AGXTP21549 392 aa6.04□□□□□ -1.44
BRCA1-229ENST00000621897 GUCY1A2P33402 732 aa6.04□□□□□ -1.44
BRCA1-229ENST00000621897 IARSP41252 1262 aaKnown RBP6.04□□□□□ -1.44
BRCA1-229ENST00000621897 SLC6A9P48067 706 aa6.04□□□□□ -1.44
BRCA1-229ENST00000621897 CHN2P52757 468 aa6.04□□□□□ -1.44
BRCA1-229ENST00000621897 PER3P56645 1201 aa6.04□□□□□ -1.44
BRCA1-229ENST00000621897 CLRN1P58418 232 aa6.04□□□□□ -1.44
BRCA1-229ENST00000621897 SP140Q13342 867 aa6.04□□□□□ -1.44
BRCA1-229ENST00000621897 ATXN7L2Q5T6C5 722 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-229ENST00000621897 AFMIDQ63HM1 303 aa6.04□□□□□ -1.44
BRCA1-229ENST00000621897 CBARPQ8N350 705 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-229ENST00000621897 AGAP2Q99490 1192 aa6.04□□□□□ -1.44
BRCA1-229ENST00000621897 TTPALQ9BTX7 342 aa6.04□□□□□ -1.44
BRCA1-229ENST00000621897 ADI1Q9BV57 179 aa6.04□□□□□ -1.44
BRCA1-229ENST00000621897 AKIP1Q9NQ31 210 aa6.04□□□□□ -1.44
BRCA1-229ENST00000621897 ZNF277Q9NRM2 450 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-229ENST00000621897 GPR45Q9Y5Y3 372 aa6.04□□□□□ -1.44
BRCA1-229ENST00000621897 DRGXA6NNA5 263 aa6.03□□□□□ -1.44
BRCA1-229ENST00000621897 FOXN1O15353 648 aa6.03□□□□□ -1.44
BRCA1-229ENST00000621897 PJA2O43164 708 aa6.03□□□□□ -1.44
BRCA1-229ENST00000621897 RBP3P10745 1247 aa6.03□□□□□ -1.44
BRCA1-229ENST00000621897 LAG3P18627 525 aa6.03□□□□□ -1.44
BRCA1-229ENST00000621897 ALDH1A3P47895 512 aa6.03□□□□□ -1.44
BRCA1-229ENST00000621897 RAP2BP61225 183 aa6.03□□□□□ -1.44
BRCA1-229ENST00000621897 MGAT2Q10469 447 aa6.03□□□□□ -1.44
BRCA1-229ENST00000621897 INAVAQ3KP66 663 aa6.03□□□□□ -1.44
BRCA1-229ENST00000621897 TIGD2Q4W5G0 525 aa6.03□□□□□ -1.44
BRCA1-229ENST00000621897 KCNV1Q6PIU1 500 aa6.03□□□□□ -1.44
BRCA1-229ENST00000621897 MRGPRGQ86SM5 289 aa6.03□□□□□ -1.44
BRCA1-229ENST00000621897 ZFP28Q8NHY6 868 aa6.03□□□□□ -1.44
BRCA1-229ENST00000621897 MYEOVQ96EZ4 313 aa6.03□□□□□ -1.44
BRCA1-229ENST00000621897 PHACTR3Q96KR7 559 aa6.03□□□□□ -1.44
BRCA1-229ENST00000621897 PRRX2Q99811 253 aa6.03□□□□□ -1.44
BRCA1-229ENST00000621897 MRI1Q9BV20 369 aa6.03□□□□□ -1.44
BRCA1-229ENST00000621897 TMX1Q9H3N1 280 aa6.03□□□□□ -1.44
BRCA1-229ENST00000621897 LANCL2Q9NS86 450 aa6.03□□□□□ -1.44
BRCA1-229ENST00000621897 DKK2Q9UBU2 259 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms