RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 MYO1AQ9UBC5 1043 aa23.22■■□□□ 1.31
SPAST-204ENST00000621856 COQ4Q9Y3A0 265 aa23.22■■□□□ 1.31
SPAST-204ENST00000621856 RCCD1A6NED2 376 aa23.22■■□□□ 1.31
SPAST-204ENST00000621856 LRRN2O75325 713 aa23.22■■□□□ 1.31
SPAST-204ENST00000621856 SMIM10L2AP0DMW4 78 aa23.22■■□□□ 1.31
SPAST-204ENST00000621856 SMIM10L2BP0DMW5 78 aa23.22■■□□□ 1.31
SPAST-204ENST00000621856 BEX3Q00994 111 aa23.22■■□□□ 1.31
SPAST-204ENST00000621856 PTK2Q05397 1052 aa23.22■■□□□ 1.31
SPAST-204ENST00000621856 SEZ6Q53EL9 994 aa23.22■■□□□ 1.31
SPAST-204ENST00000621856 MPZL3Q6UWV2 235 aa23.22■■□□□ 1.31
SPAST-204ENST00000621856 TSHZ1Q6ZSZ6 1077 aa23.22■■□□□ 1.31
SPAST-204ENST00000621856 TXLNBQ8N3L3 684 aa23.22■■□□□ 1.31
SPAST-204ENST00000621856 NLRP7Q8WX94 980 aa23.22■■□□□ 1.31
SPAST-204ENST00000621856 KAT2BQ92831 832 aa23.22■■□□□ 1.31
SPAST-204ENST00000621856 MINDY3Q9H8M7 445 aa23.22■■□□□ 1.31
SPAST-204ENST00000621856 IFT122Q9HBG6 1241 aa23.22■■□□□ 1.31
SPAST-204ENST00000621856 RAB20Q9NX57 234 aa23.22■■□□□ 1.31
SPAST-204ENST00000621856 RBAK-RBAKDNI3L0D1 243 aa23.21■■□□□ 1.31
SPAST-204ENST00000621856 OGTO15294 1046 aa23.21■■□□□ 1.31
SPAST-204ENST00000621856 B4GALT5O43286 388 aa23.21■■□□□ 1.31
SPAST-204ENST00000621856 ZEB2O60315 1214 aa23.21■■□□□ 1.31
SPAST-204ENST00000621856 CCDC172P0C7W6 258 aa23.21■■□□□ 1.31
SPAST-204ENST00000621856 PSEN2P49810 448 aa23.21■■□□□ 1.31
SPAST-204ENST00000621856 GPC3P51654 580 aa23.21■■□□□ 1.31
SPAST-204ENST00000621856 MCL1Q07820 350 aa23.21■■□□□ 1.31
SPAST-204ENST00000621856 SLC18A3Q16572 532 aa23.21■■□□□ 1.31
SPAST-204ENST00000621856 ZNF568Q3ZCX4 644 aa23.21■■□□□ 1.31
SPAST-204ENST00000621856 LMBRD2Q68DH5 695 aaPredicted RBP23.21■■□□□ 1.31
SPAST-204ENST00000621856 NFRKBQ6P4R8 1299 aa23.21■■□□□ 1.31
SPAST-204ENST00000621856 ZNF571Q7Z3V5 609 aaPredicted RBP23.21■■□□□ 1.31
SPAST-204ENST00000621856 REM2Q8IYK8 340 aaPredicted RBP23.21■■□□□ 1.31
SPAST-204ENST00000621856 SLC35F6Q8N357 371 aa23.21■■□□□ 1.31
SPAST-204ENST00000621856 TAS1R2Q8TE23 839 aa23.21■■□□□ 1.31
SPAST-204ENST00000621856 LMBR1Q8WVP7 490 aa23.21■■□□□ 1.31
SPAST-204ENST00000621856 NT5C1BQ96P26 610 aa23.21■■□□□ 1.31
SPAST-204ENST00000621856 LACRTQ9GZZ8 138 aa23.21■■□□□ 1.31
SPAST-204ENST00000621856 FANCGO15287 622 aa23.2■■□□□ 1.3
SPAST-204ENST00000621856 EVI5O60447 810 aa23.2■■□□□ 1.3
SPAST-204ENST00000621856 URI1O94763 535 aaPredicted RBP23.2■■□□□ 1.3
SPAST-204ENST00000621856 FLT3LGP49771 235 aa23.2■■□□□ 1.3
SPAST-204ENST00000621856 WNT7BP56706 349 aa23.2■■□□□ 1.3
SPAST-204ENST00000621856 CLDN10P78369 228 aa23.2■■□□□ 1.3
SPAST-204ENST00000621856 KIF22Q14807 665 aa23.2■■□□□ 1.3
SPAST-204ENST00000621856 VPS36Q86VN1 386 aa23.2■■□□□ 1.3
SPAST-204ENST00000621856 IFNLR1Q8IU57 520 aaPredicted RBP23.2■■□□□ 1.3
SPAST-204ENST00000621856 BRSK2Q8IWQ3 736 aa23.2■■□□□ 1.3
SPAST-204ENST00000621856 ZNF516Q92618 1163 aa23.2■■□□□ 1.3
SPAST-204ENST00000621856 CGRRF1Q99675 332 aa23.2■■□□□ 1.3
SPAST-204ENST00000621856 GPR88Q9GZN0 384 aa23.2■■□□□ 1.3
SPAST-204ENST00000621856 ADAMTS1Q9UHI8 967 aa23.2■■□□□ 1.3
SPAST-204ENST00000621856 NRCAMQ92823 1304 aa23.2■■□□□ 1.3
SPAST-204ENST00000621856 BIRC3Q13489 604 aa23.19■■□□□ 1.3
SPAST-204ENST00000621856 FSCN1Q16658 493 aaKnown RBP23.19■■□□□ 1.3
SPAST-204ENST00000621856 KIAA0319LQ8IZA0 1049 aa23.19■■□□□ 1.3
SPAST-204ENST00000621856 PPM1KQ8N3J5 372 aa23.19■■□□□ 1.3
SPAST-204ENST00000621856 TRPV1Q8NER1 839 aa23.19■■□□□ 1.3
SPAST-204ENST00000621856 PPP1R13LQ8WUF5 828 aa23.19■■□□□ 1.3
SPAST-204ENST00000621856 TRIB2Q92519 343 aa23.19■■□□□ 1.3
SPAST-204ENST00000621856 A0A087X0T9 212 aa23.19■■□□□ 1.3
SPAST-204ENST00000621856 ABLIM1O14639 778 aa23.19■■□□□ 1.3
SPAST-204ENST00000621856 FAM228BP0C875 321 aa23.19■■□□□ 1.3
SPAST-204ENST00000621856 PROZP22891 400 aa23.19■■□□□ 1.3
SPAST-204ENST00000621856 ANXA13P27216 316 aa23.19■■□□□ 1.3
SPAST-204ENST00000621856 TNFSF9P41273 254 aa23.19■■□□□ 1.3
SPAST-204ENST00000621856 PRKCZQ05513 592 aa23.19■■□□□ 1.3
SPAST-204ENST00000621856 FAM187BQ17R55 369 aa23.19■■□□□ 1.3
SPAST-204ENST00000621856 FAM84AQ96KN4 292 aa23.19■■□□□ 1.3
SPAST-204ENST00000621856 TNFSF13BQ9Y275 285 aa23.19■■□□□ 1.3
SPAST-204ENST00000621856 CNTNAP2Q9UHC6 1331 aa23.18■■□□□ 1.3
SPAST-204ENST00000621856 DUSP11O75319 330 aaKnown RBP23.18■■□□□ 1.3
SPAST-204ENST00000621856 CSDE1O75534 798 aaKnown RBP23.18■■□□□ 1.3
SPAST-204ENST00000621856 CYBAP13498 195 aa23.18■■□□□ 1.3
SPAST-204ENST00000621856 PIK3CAP42336 1068 aa23.18■■□□□ 1.3
SPAST-204ENST00000621856 MFAP3P55082 362 aa23.18■■□□□ 1.3
SPAST-204ENST00000621856 EEF1DP3Q658K8 133 aa23.18■■□□□ 1.3
SPAST-204ENST00000621856 C15orf39Q6ZRI6 1047 aa23.18■■□□□ 1.3
SPAST-204ENST00000621856 KATNAL1Q9BW62 490 aa23.18■■□□□ 1.3
SPAST-204ENST00000621856 FAM49AQ9H0Q0 323 aaPredicted RBP23.18■■□□□ 1.3
SPAST-204ENST00000621856 PTPRHQ9HD43 1115 aa23.18■■□□□ 1.3
SPAST-204ENST00000621856 CREBZFQ9NS37 354 aa23.18■■□□□ 1.3
SPAST-204ENST00000621856 PTPRJQ12913 1337 aa23.17■■□□□ 1.3
SPAST-204ENST00000621856 FOXN3O00409 490 aaPredicted RBP23.17■■□□□ 1.3
SPAST-204ENST00000621856 FAM189A1O60320 539 aa23.17■■□□□ 1.3
SPAST-204ENST00000621856 C4BPAP04003 597 aaKnown RBP23.17■■□□□ 1.3
SPAST-204ENST00000621856 IQCF3P0C7M6 154 aa23.17■■□□□ 1.3
SPAST-204ENST00000621856 SP3Q02447 781 aa23.17■■□□□ 1.3
SPAST-204ENST00000621856 ZACNQ401N2 412 aa23.17■■□□□ 1.3
SPAST-204ENST00000621856 ZNF410Q86VK4 478 aa23.17■■□□□ 1.3
SPAST-204ENST00000621856 CDR2LQ86X02 465 aaPredicted RBP23.17■■□□□ 1.3
SPAST-204ENST00000621856 THNSL1Q8IYQ7 743 aa23.17■■□□□ 1.3
SPAST-204ENST00000621856 KAT5Q92993 513 aa23.17■■□□□ 1.3
SPAST-204ENST00000621856 FAM212AQ96EL1 285 aa23.17■■□□□ 1.3
SPAST-204ENST00000621856 MACROD2A1Z1Q3 448 aa23.16■■□□□ 1.3
SPAST-204ENST00000621856 CTAGE9A4FU28 777 aa23.16■■□□□ 1.3
SPAST-204ENST00000621856 HAS3O00219 553 aa23.16■■□□□ 1.3
SPAST-204ENST00000621856 HLA-DRAP01903 254 aa23.16■■□□□ 1.3
SPAST-204ENST00000621856 TDRD10Q5VZ19 366 aaKnown RBP23.16■■□□□ 1.3
SPAST-204ENST00000621856 SECISBP2LQ93073 1101 aaKnown RBP23.16■■□□□ 1.3
SPAST-204ENST00000621856 CDT1Q9H211 546 aa23.16■■□□□ 1.3
SPAST-204ENST00000621856 CPSF3Q9UKF6 684 aaKnown RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms