RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 CDK4P11802 303 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 ENGP17813 658 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 ATP4AP20648 1035 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 DRD1P21728 446 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 FCARP24071 287 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 CTHP32929 405 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 IL12RB1P42701 662 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 KPNA1P52294 538 aaPredicted RBP2.69□□□□□ -1.98
CPNE3-211ENST00000621526 ATXN3P54252 364 aaPredicted RBP2.69□□□□□ -1.98
CPNE3-211ENST00000621526 ACTR2P61160 394 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 FAM193AP78312 1265 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 PLCB2Q00722 1185 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 SP4Q02446 784 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 GFPT1Q06210 699 aaPredicted RBP2.69□□□□□ -1.98
CPNE3-211ENST00000621526 GRSF1Q12849 480 aaKnown RBP eCLIP2.69□□□□□ -1.98
CPNE3-211ENST00000621526 ELAVL2Q12926 359 aaKnown RBP2.69□□□□□ -1.98
CPNE3-211ENST00000621526 MTMR1Q13613 665 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 BYSLQ13895 437 aaKnown RBP2.69□□□□□ -1.98
CPNE3-211ENST00000621526 UBAP2LQ14157 1087 aaKnown RBP2.69□□□□□ -1.98
CPNE3-211ENST00000621526 PCBP1Q15365 356 aaKnown RBP eCLIP2.69□□□□□ -1.98
CPNE3-211ENST00000621526 DUOXA1Q1HG43 343 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 ARHGAP29Q52LW3 1261 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 C4orf17Q53FE4 359 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 TRIM61Q5EBN2 209 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 TMEM196Q5HYL7 178 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 WDR44Q5JSH3 913 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 PRSS36Q5K4E3 855 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 ZMYM1Q5SVZ6 1142 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 CYP4A22Q5TCH4 519 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 PEAR1Q5VY43 1037 aaPredicted RBP2.69□□□□□ -1.98
CPNE3-211ENST00000621526 FAM160B1Q5W0V3 765 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 EFCAB12Q6NXP0 572 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 CEP85Q6P2H3 762 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 POTEHQ6S545 545 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 VITQ6UXI7 678 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 Q6ZS52 159 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 MFSD6Q6ZSS7 791 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 CYP2U1Q7Z449 544 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 HAUS6Q7Z4H7 955 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 SLCO6A1Q86UG4 719 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 IQCA1Q86XH1 822 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 TMC8Q8IU68 726 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 CACTIN-AS1Q8N1I8 211 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 TMEM57Q8N5G2 664 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 METTL13Q8N6R0 699 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 SERBP1Q8NC51 408 aaKnown RBP eCLIP2.69□□□□□ -1.98
CPNE3-211ENST00000621526 PNMA1Q8ND90 353 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 ZNF461Q8TAF7 563 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 SNRNP27Q8WVK2 155 aaKnown RBP2.69□□□□□ -1.98
CPNE3-211ENST00000621526 PIGKQ92643 395 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 ESR2Q92731 530 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 CUL5Q93034 780 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 EXOC4Q96A65 974 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 MED8Q96G25 268 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 MAP7D2Q96T17 732 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 SDF4Q9BRK5 362 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 TTPALQ9BTX7 342 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 NIFKQ9BYG3 293 aaKnown RBP2.69□□□□□ -1.98
CPNE3-211ENST00000621526 GPR62Q9BZJ7 368 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 CPVLQ9H3G5 476 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 RNF41Q9H4P4 317 aaPredicted RBP2.69□□□□□ -1.98
CPNE3-211ENST00000621526 KAT14Q9H8E8 782 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 RSAD1Q9HA92 442 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 KCNH7Q9NS40 1196 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 NRBP2Q9NSY0 501 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 RBM12Q9NTZ6 932 aaKnown RBP2.69□□□□□ -1.98
CPNE3-211ENST00000621526 MARCH5Q9NX47 278 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 OBP2AQ9NY56 170 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 KCNK4Q9NYG8 393 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 ANKMY1Q9P2S6 941 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 MBD1Q9UIS9 605 aaPredicted RBP2.69□□□□□ -1.98
CPNE3-211ENST00000621526 PCDHB2Q9Y5E7 798 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 STK24Q9Y6E0 443 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 PARP14Q460N5 1801 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 DOPEY1Q5JWR5 2465 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 APC2O95996 2303 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 LAMA1P25391 3075 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 ZMYM6O95789 1325 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 FOCADQ5VW36 1801 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 SDK1Q7Z5N4 2213 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 PTPRQQ9UMZ3 2332 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 WDR27A2RRH5 827 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 ZNF316A6NFI3 1004 aaPredicted RBP2.68□□□□□ -1.98
CPNE3-211ENST00000621526 HEPACAM2A8MVW5 462 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 TRIM6-TRIM34B2RNG4 842 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 PATE3B3GLJ2 98 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 M0R2C6 588 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 MEIS1O00470 390 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 DCLK1O15075 740 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 FOXP2O15409 715 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 CCL16O15467 120 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 SH3BP5O60239 455 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 GJB3O75712 270 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 ABLIM3O94929 683 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 AFPP02771 609 aaKnown RBP2.68□□□□□ -1.98
CPNE3-211ENST00000621526 ZNF883P0CG24 379 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 MYBP10242 640 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 SFPQP23246 707 aaKnown RBP eCLIP2.68□□□□□ -1.98
CPNE3-211ENST00000621526 ITPKBP27987 946 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 ADSSP30520 456 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms