RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 H0Y3Z8 333 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 MGRN1O60291 552 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 ALOX15P16050 662 aaPredicted RBP11.45□□□□□ -0.58
CDH1-214ENST00000621016 DESP17661 470 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 PEX3P56589 373 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 ITIH3Q06033 890 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 CEP55Q53EZ4 464 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 DACT2Q5SW24 774 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 PLA2G4FQ68DD2 849 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 PADI6Q6TGC4 694 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 CEP128Q6ZU80 1094 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 NLGN1Q8N2Q7 840 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 HSD17B14Q9BPX1 270 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 PPP1R1BQ9UD71 204 aaPredicted RBP11.45□□□□□ -0.58
CDH1-214ENST00000621016 ZNF711Q9Y462 761 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 MYO3BQ8WXR4 1341 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 LAMB1P07942 1786 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 NAV1Q8NEY1 1877 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 CYP26A1O43174 497 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 SPOPO43791 374 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 SHBGP04278 402 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 MDH1P40925 334 aaKnown RBP11.45□□□□□ -0.58
CDH1-214ENST00000621016 USP46P62068 366 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 DR1Q01658 176 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 ZNF844Q08AG5 666 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 FAM102BQ5T8I3 360 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 ZNF720Q7Z2F6 126 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 MIER3Q7Z3K6 550 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 ARHGEF19Q8IW93 802 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 RNF168Q8IYW5 571 aaPredicted RBP11.45□□□□□ -0.58
CDH1-214ENST00000621016 IL31RAQ8NI17 732 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 MASTLQ96GX5 879 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 SEC16BQ96JE7 1060 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 PBKQ96KB5 322 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 NDNQ99608 321 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 MOV10L1Q9BXT6 1211 aaKnown RBP11.45□□□□□ -0.58
CDH1-214ENST00000621016 ISCUQ9H1K1 167 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 COG5Q9UP83 839 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 CYP3A7-CYP3A51PA0A087WV96 503 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 NFIBO00712 420 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 FAM200BP0CF97 657 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 KRT5P13647 590 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 FGFR4P22455 802 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 CYP3A7P24462 503 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 C1orf186Q6ZWK4 172 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 KRT27Q7Z3Y8 459 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 CACNA2D3Q8IZS8 1091 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 SLX1AQ9BQ83 275 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 PI4K2AQ9BTU6 479 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 TRAIPQ9BWF2 469 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 ACTR5Q9H9F9 607 aaPredicted RBP11.45□□□□□ -0.58
CDH1-214ENST00000621016 PNMA2Q9UL42 364 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 CCPG1Q9ULG6 757 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 ALG6Q9Y672 507 aa11.45□□□□□ -0.58
CDH1-214ENST00000621016 TCRBV7S2A1N4TA0A589 114 aa11.44□□□□□ -0.58
CDH1-214ENST00000621016 TESPA1A2RU30 521 aaPredicted RBP11.44□□□□□ -0.58
CDH1-214ENST00000621016 SESN3P58005 492 aa11.44□□□□□ -0.58
CDH1-214ENST00000621016 EPM2AIP1Q7L775 607 aaPredicted RBP11.44□□□□□ -0.58
CDH1-214ENST00000621016 LDHDQ86WU2 507 aa11.44□□□□□ -0.58
CDH1-214ENST00000621016 CCDC105Q8IYK2 499 aa11.44□□□□□ -0.58
CDH1-214ENST00000621016 DHX38Q92620 1227 aaKnown RBP11.44□□□□□ -0.58
CDH1-214ENST00000621016 LRRC45Q96CN5 670 aa11.44□□□□□ -0.58
CDH1-214ENST00000621016 FMO2Q99518 471 aa11.44□□□□□ -0.58
CDH1-214ENST00000621016 ADAM33Q9BZ11 813 aa11.44□□□□□ -0.58
CDH1-214ENST00000621016 TOPORSQ9NS56 1045 aaPredicted RBP11.44□□□□□ -0.58
CDH1-214ENST00000621016 FZD1Q9UP38 647 aa11.44□□□□□ -0.58
CDH1-214ENST00000621016 DLEC1Q9Y238 1755 aa11.44□□□□□ -0.58
CDH1-214ENST00000621016 SGPL1O95470 568 aa11.44□□□□□ -0.58
CDH1-214ENST00000621016 CCNFP41002 786 aa11.44□□□□□ -0.58
CDH1-214ENST00000621016 PRELPP51888 382 aa11.44□□□□□ -0.58
CDH1-214ENST00000621016 PPP3CAQ08209 521 aa11.44□□□□□ -0.58
CDH1-214ENST00000621016 DCAF12L1Q5VU92 463 aa11.44□□□□□ -0.58
CDH1-214ENST00000621016 OLFML2BQ68BL8 750 aa11.44□□□□□ -0.58
CDH1-214ENST00000621016 LLGL2Q6P1M3 1020 aa11.44□□□□□ -0.58
CDH1-214ENST00000621016 FBXO25Q8TCJ0 367 aa11.44□□□□□ -0.58
CDH1-214ENST00000621016 MRRFQ96E11 262 aaKnown RBP11.44□□□□□ -0.58
CDH1-214ENST00000621016 NAF1Q96HR8 494 aaKnown RBP11.44□□□□□ -0.58
CDH1-214ENST00000621016 NACC1Q96RE7 527 aa11.44□□□□□ -0.58
CDH1-214ENST00000621016 ABCF3Q9NUQ8 709 aa11.44□□□□□ -0.58
CDH1-214ENST00000621016 APEX2Q9UBZ4 518 aa11.44□□□□□ -0.58
CDH1-214ENST00000621016 CNOT8Q9UFF9 292 aaKnown RBP11.44□□□□□ -0.58
CDH1-214ENST00000621016 DAAM1Q9Y4D1 1078 aa11.44□□□□□ -0.58
CDH1-214ENST00000621016 IGLV3-22A0A075B6J6 115 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 MARSP56192 900 aaKnown RBP11.43□□□□□ -0.58
CDH1-214ENST00000621016 RNASELQ05823 741 aaKnown RBP11.43□□□□□ -0.58
CDH1-214ENST00000621016 ARHGAP18Q8N392 663 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 OGFOD1Q8N543 542 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 SCFD2Q8WU76 684 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 FGD4Q96M96 766 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 STK33Q9BYT3 514 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 RAVER2Q9HCJ3 691 aaKnown RBP11.43□□□□□ -0.58
CDH1-214ENST00000621016 ZNF277Q9NRM2 450 aaPredicted RBP11.43□□□□□ -0.58
CDH1-214ENST00000621016 WDR35Q9P2L0 1181 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 ZMYND8Q9ULU4 1186 aaPredicted RBP11.43□□□□□ -0.58
CDH1-214ENST00000621016 RABL2BQ9UNT1 228 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 TRIM33Q9UPN9 1127 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 CTDP1Q9Y5B0 961 aaPredicted RBP11.43□□□□□ -0.58
CDH1-214ENST00000621016 A6NHS1 94 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 SMAPO00193 183 aa11.43□□□□□ -0.58
CDH1-214ENST00000621016 FAM107AO95990 144 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms