RNA–Protein interactions for RNA: ENST00000620033.4

CHL1-216, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 7,311 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-216ENST00000620033 UBXN4Q92575 508 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 HES6Q96HZ4 224 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 NR1H4Q96RI1 486 aaPredicted RBP4.84□□□□□ -1.63
CHL1-216ENST00000620033 NUDCD1Q96RS6 583 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 LSM14BQ9BX40 385 aaKnown RBP4.84□□□□□ -1.63
CHL1-216ENST00000620033 SPATC1LQ9H0A9 340 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 ABHD16BQ9H3Z7 469 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 VTA1Q9NP79 307 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.84□□□□□ -1.63
CHL1-216ENST00000620033 NAGPAQ9UK23 515 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 FZD1Q9UP38 647 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 DMTF1Q9Y222 760 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 TNKSO95271 1327 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 TBC1D3DA0A087WVF3 549 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 TBC1D3IA0A087WXS9 549 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 TBC1D3EA0A087X179 549 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 TBC1D3KA0A087X1G2 549 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 TBC1D3FA6NER0 549 aaPredicted RBP4.84□□□□□ -1.63
CHL1-216ENST00000620033 TBC1D3LB9A6J9 549 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 F5H6K3 240 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 ZBTB5O15062 677 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 TBC1D3HP0C7X1 549 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 HNRNPH2P55795 449 aaKnown RBP4.84□□□□□ -1.63
CHL1-216ENST00000620033 KLRC3Q07444 240 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 RESTQ13127 1097 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 AP3B2Q13367 1082 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 LBRQ14739 615 aaKnown RBP4.84□□□□□ -1.63
CHL1-216ENST00000620033 BRD3Q15059 726 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 LPAL2Q16609 132 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 GPR158Q5T848 1215 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 TBC1D3GQ6DHY5 549 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 IQSEC1Q6DN90 963 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 TBC1D3CQ6IPX1 549 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 C16orf46Q6P387 395 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 DOK6Q6PKX4 331 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 CNGA4Q8IV77 575 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 TBC1D3Q8IZP1 549 aaPredicted RBP4.84□□□□□ -1.63
CHL1-216ENST00000620033 DPF2Q92785 391 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 PUS3Q9BZE2 481 aaKnown RBP4.84□□□□□ -1.63
CHL1-216ENST00000620033 GOLGA8IPA6NC78 632 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 GOLGA8JA6NMD2 632 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 TRAK2O60296 914 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 TACC1O75410 805 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 THP07101 528 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 GCFC2P16383 781 aaKnown RBP4.84□□□□□ -1.63
CHL1-216ENST00000620033 LAYNQ6UX15 382 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 BRAPQ7Z569 592 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 C10orf53Q8N6V4 93 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 RAPGEF5Q92565 580 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 CNDP1Q96KN2 507 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 TCEANC2Q96MN5 208 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 PLEKHA5Q9HAU0 1116 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 PCDHA4Q9UN74 947 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 HPS5Q9UPZ3 1129 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 PTCH2Q9Y6C5 1203 aa4.84□□□□□ -1.63
CHL1-216ENST00000620033 DNMT1P26358 1616 aaKnown RBP4.84□□□□□ -1.63
CHL1-216ENST00000620033 A0A1B0GVL5 298 aa4.84□□□□□ -1.64
CHL1-216ENST00000620033 SMIM23A6NLE4 172 aa4.84□□□□□ -1.64
CHL1-216ENST00000620033 VSTM5A8MXK1 200 aa4.84□□□□□ -1.64
CHL1-216ENST00000620033 POLRMTO00411 1230 aaKnown RBP4.84□□□□□ -1.64
CHL1-216ENST00000620033 IRF6O14896 467 aa4.84□□□□□ -1.64
CHL1-216ENST00000620033 GSTA4O15217 222 aa4.84□□□□□ -1.64
CHL1-216ENST00000620033 COBLO75128 1261 aa4.84□□□□□ -1.64
CHL1-216ENST00000620033 GRK3P35626 688 aa4.84□□□□□ -1.64
CHL1-216ENST00000620033 E2F4Q16254 413 aa4.84□□□□□ -1.64
CHL1-216ENST00000620033 ZNF284Q2VY69 593 aa4.84□□□□□ -1.64
CHL1-216ENST00000620033 P4HA3Q7Z4N8 544 aa4.84□□□□□ -1.64
CHL1-216ENST00000620033 ATG4CQ96DT6 458 aa4.84□□□□□ -1.64
CHL1-216ENST00000620033 CARD14Q9BXL6 1004 aa4.84□□□□□ -1.64
CHL1-216ENST00000620033 TLR8Q9NR97 1041 aaKnown RBP4.84□□□□□ -1.64
CHL1-216ENST00000620033 TPX2Q9ULW0 747 aaKnown RBP4.84□□□□□ -1.64
CHL1-216ENST00000620033 EIF3DO15371 548 aaKnown RBP eCLIP4.84□□□□□ -1.64
CHL1-216ENST00000620033 ITGAVP06756 1048 aa4.84□□□□□ -1.64
CHL1-216ENST00000620033 FSHRP23945 695 aa4.84□□□□□ -1.64
CHL1-216ENST00000620033 CLK3P49761 638 aaKnown RBP4.84□□□□□ -1.64
CHL1-216ENST00000620033 HSP90AA4PQ58FG1 418 aa4.84□□□□□ -1.64
CHL1-216ENST00000620033 EFHC2Q5JST6 749 aa4.84□□□□□ -1.64
CHL1-216ENST00000620033 SPRYD7Q5W111 196 aa4.84□□□□□ -1.64
CHL1-216ENST00000620033 KLC3Q6P597 504 aa4.84□□□□□ -1.64
CHL1-216ENST00000620033 CXCL17Q6UXB2 119 aa4.84□□□□□ -1.64
CHL1-216ENST00000620033 CYP2U1Q7Z449 544 aa4.84□□□□□ -1.64
CHL1-216ENST00000620033 SPIRE2Q8WWL2 714 aa4.84□□□□□ -1.64
CHL1-216ENST00000620033 PRCCQ92733 491 aaPredicted RBP4.84□□□□□ -1.64
CHL1-216ENST00000620033 CDKL2Q92772 493 aa4.84□□□□□ -1.64
CHL1-216ENST00000620033 LLPHQ9BRT6 129 aaKnown RBP4.84□□□□□ -1.64
CHL1-216ENST00000620033 MCCC2Q9HCC0 563 aa4.84□□□□□ -1.64
CHL1-216ENST00000620033 DISP2A7MBM2 1401 aa4.83□□□□□ -1.64
CHL1-216ENST00000620033 CPED1A4D0V7 1026 aa4.83□□□□□ -1.64
CHL1-216ENST00000620033 TPD52L2O43399 206 aaKnown RBP4.83□□□□□ -1.64
CHL1-216ENST00000620033 VTNP04004 478 aa4.83□□□□□ -1.64
CHL1-216ENST00000620033 CSF1RP07333 972 aa4.83□□□□□ -1.64
CHL1-216ENST00000620033 GUCY2CP25092 1073 aa4.83□□□□□ -1.64
CHL1-216ENST00000620033 NRIP1P48552 1158 aa4.83□□□□□ -1.64
CHL1-216ENST00000620033 PAPOLAP51003 745 aaKnown RBP4.83□□□□□ -1.64
CHL1-216ENST00000620033 CHPFQ8IZ52 775 aa4.83□□□□□ -1.64
CHL1-216ENST00000620033 ENOX1Q8TC92 643 aaKnown RBP4.83□□□□□ -1.64
CHL1-216ENST00000620033 BADQ92934 168 aa4.83□□□□□ -1.64
CHL1-216ENST00000620033 MTMR8Q96EF0 704 aa4.83□□□□□ -1.64
CHL1-216ENST00000620033 CCDC42Q96M95 316 aa4.83□□□□□ -1.64
CHL1-216ENST00000620033 HAUS8Q9BT25 410 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms