RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 GABPB2Q8TAK5 448 aaPredicted RBP14.79□□□□□ -0.04
CNOT3-210ENST00000618939 NLRP7Q8WX94 980 aa14.79□□□□□ -0.04
CNOT3-210ENST00000618939 MRPL4Q9BYD3 311 aaKnown RBP14.79□□□□□ -0.04
CNOT3-210ENST00000618939 OSGEPQ9NPF4 335 aa14.79□□□□□ -0.04
CNOT3-210ENST00000618939 ZSCAN5CA6NGD5 496 aaPredicted RBP14.79□□□□□ -0.04
CNOT3-210ENST00000618939 KIAA0391O15091 583 aaKnown RBP14.79□□□□□ -0.04
CNOT3-210ENST00000618939 MAPK13O15264 365 aa14.79□□□□□ -0.04
CNOT3-210ENST00000618939 CHN1P15882 459 aa14.79□□□□□ -0.04
CNOT3-210ENST00000618939 CCNA1P78396 465 aa14.79□□□□□ -0.04
CNOT3-210ENST00000618939 MYO1EQ12965 1108 aa14.79□□□□□ -0.04
CNOT3-210ENST00000618939 PTGISQ16647 500 aa14.79□□□□□ -0.04
CNOT3-210ENST00000618939 PHLDB3Q6NSJ2 640 aa14.79□□□□□ -0.04
CNOT3-210ENST00000618939 ZNF449Q6P9G9 518 aa14.79□□□□□ -0.04
CNOT3-210ENST00000618939 TRMT10CQ7L0Y3 403 aaKnown RBP14.79□□□□□ -0.04
CNOT3-210ENST00000618939 SCYL3Q8IZE3 742 aa14.79□□□□□ -0.04
CNOT3-210ENST00000618939 HAS1Q92839 578 aa14.79□□□□□ -0.04
CNOT3-210ENST00000618939 SLC35C1Q96A29 364 aa14.79□□□□□ -0.04
CNOT3-210ENST00000618939 MMTAG2Q9BU76 263 aaKnown RBP14.79□□□□□ -0.04
CNOT3-210ENST00000618939 ANKEF1Q9NU02 776 aa14.79□□□□□ -0.04
CNOT3-210ENST00000618939 GTF3C4Q9UKN8 822 aa14.79□□□□□ -0.04
CNOT3-210ENST00000618939 PCDHB2Q9Y5E7 798 aa14.79□□□□□ -0.04
CNOT3-210ENST00000618939 CORO7P57737 925 aa14.78□□□□□ -0.04
CNOT3-210ENST00000618939 EAPPQ56P03 285 aaPredicted RBP14.78□□□□□ -0.04
CNOT3-210ENST00000618939 APOBEC3HQ6NTF7 200 aaKnown RBP14.78□□□□□ -0.04
CNOT3-210ENST00000618939 CFAP61Q8NHU2 1237 aa14.78□□□□□ -0.04
CNOT3-210ENST00000618939 TMEM143Q96AN5 459 aa14.78□□□□□ -0.04
CNOT3-210ENST00000618939 XPO6Q96QU8 1125 aaKnown RBP14.78□□□□□ -0.04
CNOT3-210ENST00000618939 CBWD1Q9BRT8 395 aa14.78□□□□□ -0.04
CNOT3-210ENST00000618939 TMX2Q9Y320 296 aa14.78□□□□□ -0.04
CNOT3-210ENST00000618939 A0A0A6YYK5 440 aaPredicted RBP14.78□□□□□ -0.04
CNOT3-210ENST00000618939 IQANK1A0A1B0GTG1 560 aa14.78□□□□□ -0.04
CNOT3-210ENST00000618939 PHF20L1A8MW92 1017 aa14.78□□□□□ -0.04
CNOT3-210ENST00000618939 XPOTO43592 962 aaKnown RBP14.78□□□□□ -0.04
CNOT3-210ENST00000618939 FAM107AO95990 144 aa14.78□□□□□ -0.04
CNOT3-210ENST00000618939 ITIH2P19823 946 aa14.78□□□□□ -0.04
CNOT3-210ENST00000618939 HOXA10P31260 410 aaPredicted RBP14.78□□□□□ -0.04
CNOT3-210ENST00000618939 PSMC4P43686 418 aa14.78□□□□□ -0.04
CNOT3-210ENST00000618939 GPC3P51654 580 aa14.78□□□□□ -0.04
CNOT3-210ENST00000618939 MKRN4PQ13434 485 aaPredicted RBP14.78□□□□□ -0.04
CNOT3-210ENST00000618939 TFDP2Q14188 446 aa14.78□□□□□ -0.04
CNOT3-210ENST00000618939 NBPF9Q3BBW0 867 aa14.78□□□□□ -0.04
CNOT3-210ENST00000618939 SYDE1Q6ZW31 735 aaPredicted RBP14.78□□□□□ -0.04
CNOT3-210ENST00000618939 TGS1Q96RS0 853 aaKnown RBP14.78□□□□□ -0.04
CNOT3-210ENST00000618939 TRAIPQ9BWF2 469 aa14.78□□□□□ -0.04
CNOT3-210ENST00000618939 TEX13BQ9BXU2 312 aa14.78□□□□□ -0.04
CNOT3-210ENST00000618939 VCXQ9H320 206 aa14.78□□□□□ -0.04
CNOT3-210ENST00000618939 PCSK1NQ9UHG2 260 aa14.78□□□□□ -0.04
CNOT3-210ENST00000618939 PRDM4Q9UKN5 801 aa14.78□□□□□ -0.04
CNOT3-210ENST00000618939 REXO2Q9Y3B8 237 aaKnown RBP14.78□□□□□ -0.04
CNOT3-210ENST00000618939 PSMC1P62191 440 aaKnown RBP14.78□□□□□ -0.04
CNOT3-210ENST00000618939 MAPK7Q13164 816 aa14.78□□□□□ -0.04
CNOT3-210ENST00000618939 GEN1Q17RS7 908 aa14.78□□□□□ -0.04
CNOT3-210ENST00000618939 DUOXA2Q1HG44 320 aa14.78□□□□□ -0.04
CNOT3-210ENST00000618939 ZSWIM1Q9BR11 485 aa14.78□□□□□ -0.04
CNOT3-210ENST00000618939 TMEM117Q9H0C3 514 aa14.78□□□□□ -0.04
CNOT3-210ENST00000618939 NOD1Q9Y239 953 aa14.78□□□□□ -0.04
CNOT3-210ENST00000618939 PI4K2BG5E9Z4 385 aa14.78□□□□□ -0.04
CNOT3-210ENST00000618939 ICAM1P05362 532 aa14.78□□□□□ -0.04
CNOT3-210ENST00000618939 KRT7P08729 469 aa14.78□□□□□ -0.04
CNOT3-210ENST00000618939 OSBPP22059 807 aa14.78□□□□□ -0.04
CNOT3-210ENST00000618939 PCGF5Q86SE9 256 aa14.78□□□□□ -0.04
CNOT3-210ENST00000618939 DNAJC19Q96DA6 116 aa14.78□□□□□ -0.04
CNOT3-210ENST00000618939 ZNF668Q96K58 619 aaPredicted RBP14.78□□□□□ -0.04
CNOT3-210ENST00000618939 TAAR1Q96RJ0 339 aa14.78□□□□□ -0.04
CNOT3-210ENST00000618939 KIFC3Q9BVG8 833 aa14.78□□□□□ -0.04
CNOT3-210ENST00000618939 MOV10L1Q9BXT6 1211 aaKnown RBP14.78□□□□□ -0.04
CNOT3-210ENST00000618939 LRRC37A3O60309 1634 aa14.77□□□□□ -0.04
CNOT3-210ENST00000618939 HSPA9P38646 679 aaKnown RBP14.77□□□□□ -0.04
CNOT3-210ENST00000618939 ARL4AP40617 200 aa14.77□□□□□ -0.04
CNOT3-210ENST00000618939 COG2Q14746 738 aa14.77□□□□□ -0.04
CNOT3-210ENST00000618939 GPRC5CQ9NQ84 441 aa14.77□□□□□ -0.04
CNOT3-210ENST00000618939 SLC5A4Q9NY91 659 aa14.77□□□□□ -0.04
CNOT3-210ENST00000618939 SCAF8Q9UPN6 1271 aaKnown RBP14.77□□□□□ -0.04
CNOT3-210ENST00000618939 SLC12A2P55011 1212 aa14.77□□□□□ -0.04
CNOT3-210ENST00000618939 AMPD2Q01433 879 aa14.77□□□□□ -0.04
CNOT3-210ENST00000618939 SLC29A2Q14542 456 aa14.77□□□□□ -0.04
CNOT3-210ENST00000618939 TKFCQ3LXA3 575 aa14.77□□□□□ -0.04
CNOT3-210ENST00000618939 EPC2Q52LR7 807 aa14.77□□□□□ -0.04
CNOT3-210ENST00000618939 ZNF662Q6ZS27 426 aa14.77□□□□□ -0.04
CNOT3-210ENST00000618939 DPP9Q86TI2 863 aa14.77□□□□□ -0.04
CNOT3-210ENST00000618939 ZBED8Q8IZ13 594 aa14.77□□□□□ -0.04
CNOT3-210ENST00000618939 AENQ8WTP8 325 aaKnown RBP14.77□□□□□ -0.04
CNOT3-210ENST00000618939 CYFIP2Q96F07 1278 aa14.77□□□□□ -0.04
CNOT3-210ENST00000618939 CFAP36Q96G28 342 aa14.77□□□□□ -0.04
CNOT3-210ENST00000618939 PI4K2AQ9BTU6 479 aa14.77□□□□□ -0.04
CNOT3-210ENST00000618939 C2orf40Q9H1Z8 148 aa14.77□□□□□ -0.04
CNOT3-210ENST00000618939 POLRMTO00411 1230 aaKnown RBP14.77□□□□□ -0.05
CNOT3-210ENST00000618939 HLA-DRAP01903 254 aa14.77□□□□□ -0.05
CNOT3-210ENST00000618939 AP3M2P53677 418 aa14.77□□□□□ -0.05
CNOT3-210ENST00000618939 PRKCEQ02156 737 aa14.77□□□□□ -0.05
CNOT3-210ENST00000618939 PDIA2Q13087 525 aaKnown RBP14.77□□□□□ -0.05
CNOT3-210ENST00000618939 GRM1Q13255 1194 aa14.77□□□□□ -0.05
CNOT3-210ENST00000618939 DRP2Q13474 957 aa14.77□□□□□ -0.05
CNOT3-210ENST00000618939 RCN2Q14257 317 aa14.77□□□□□ -0.05
CNOT3-210ENST00000618939 STAT4Q14765 748 aa14.77□□□□□ -0.05
CNOT3-210ENST00000618939 LONRF1Q17RB8 773 aa14.77□□□□□ -0.05
CNOT3-210ENST00000618939 COL23A1Q86Y22 540 aaPredicted RBP14.77□□□□□ -0.05
CNOT3-210ENST00000618939 SLC13A5Q86YT5 568 aaPredicted RBP14.77□□□□□ -0.05
CNOT3-210ENST00000618939 RHPN2Q8IUC4 686 aa14.77□□□□□ -0.05
CNOT3-210ENST00000618939 CBWD2Q8IUF1 395 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms