RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 SPICE1Q8N0Z3 855 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 H2AFY2Q9P0M6 372 aaPredicted RBP12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 ADGRA3Q8IWK6 1321 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 GOLGA8JA6NMD2 632 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 PPP1R37O75864 691 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 SNAP25P60880 206 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 SULF1Q8IWU6 871 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 MAP4K1Q92918 833 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 ADD3Q9UEY8 706 aaKnown RBP12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 PCDHB6Q9Y5E3 794 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 PFASO15067 1338 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 TK2O00142 265 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 BNIP3LO60238 219 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 ENO3P13929 434 aaPredicted RBP12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 UNC13DQ70J99 1090 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 SH3KBP1Q96B97 665 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 DDX47Q9H0S4 455 aaKnown RBP12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 SCNN1DP51172 638 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 PKN3Q6P5Z2 889 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 RSPH1Q8WYR4 309 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 GLMNQ92990 594 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 UBAP1Q9NZ09 502 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 GGT7Q9UJ14 662 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 DMRT2Q9Y5R5 561 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 UBXN8O00124 270 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 RGS5O15539 181 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 ASNA1O43681 348 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 RESTQ13127 1097 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 PDAP1Q13442 181 aaKnown RBP12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 KIF2BQ8N4N8 673 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 ERP27Q96DN0 273 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 EPS8L2Q9H6S3 715 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 NEMP1O14524 444 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 GYG1P46976 350 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 KCNQ4P56696 695 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 C6orf10Q5SRN2 563 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 TRIM72Q6ZMU5 477 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 MICU2Q8IYU8 434 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 OR6P1Q8NGX9 317 aa12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 EXOSC4Q9NPD3 245 aaKnown RBP12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 AFF4Q9UHB7 1163 aaKnown RBP12.12□□□□□ -0.47
PCDHA4-204ENST00000618834 ALBP02768 609 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 NUP107P57740 925 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 LRRC31Q6UY01 552 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 PRUNE1Q86TP1 453 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 RAB42Q8N4Z0 105 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 MXD3Q9BW11 206 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 MARCOQ9UEW3 520 aaPredicted RBP12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 DFFAO00273 331 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 FAM107AO95990 144 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 EIF2B2P49770 351 aaKnown RBP12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 TAP1Q03518 808 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 P3H1Q32P28 736 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 AGBL2Q5U5Z8 902 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 CCDC81Q6ZN84 652 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 MAP3K19Q56UN5 1328 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 RNF123Q5XPI4 1314 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 AIM2O14862 343 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 UBXN2AP68543 259 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 BYSLQ13895 437 aaKnown RBP12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 RCN1Q15293 331 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 CC2D2BQ6DHV5 1058 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 CDCA7Q9BWT1 371 aaPredicted RBP12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 SLC40A1Q9NP59 571 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 UVRAGQ9P2Y5 699 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 CIAO1O76071 339 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 ZNF667Q5HYK9 610 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 DEPDC7Q96QD5 511 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 IMPAD1Q9NX62 359 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 MYO3BQ8WXR4 1341 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 ARPP19P56211 112 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 GTF2IP78347 998 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 ZNF211Q13398 564 aaPredicted RBP12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 SYDE2Q5VT97 1194 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 FAM153AQ9UHL3 310 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 CDY2AQ9Y6F7 541 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 CDY1Q9Y6F8 540 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 ERBB4Q15303 1308 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 MAGEA13PA6NCF6 341 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 DIS3LQ8TF46 1054 aaKnown RBP12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 RMDN1Q96DB5 314 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 ZBED2Q9BTP6 218 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 SPRTNQ9H040 489 aaPredicted RBP12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 PNMA6FA0A0J9YX94 578 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 PRPF3O43395 683 aaKnown RBP12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 CAND2O75155 1236 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 USP1O94782 785 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 PLA2G4AP47712 749 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 CORO7P57737 925 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 COG2Q14746 738 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 SMAD1Q15797 465 aaKnown RBP12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 SH3BP5LQ7L8J4 393 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 CABLES1Q8TDN4 633 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 PHF20L1A8MW92 1017 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 CD2BP2O95400 341 aaKnown RBP12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 ATP1A1P05023 1023 aaKnown RBP12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 HMOX2P30519 316 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 ZNF589Q86UQ0 364 aaPredicted RBP12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 HEATR4Q86WZ0 1026 aa12.11□□□□□ -0.47
PCDHA4-204ENST00000618834 BFARQ9NZS9 450 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms