RNA–Protein interactions for RNA: ENST00000618361.4

CBWD1-227, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-227ENST00000618361 RCAN1P53805 252 aa8.7□□□□□ -1.02
CBWD1-227ENST00000618361 MLLT6P55198 1093 aaPredicted RBP8.7□□□□□ -1.02
CBWD1-227ENST00000618361 NCBP1Q09161 790 aaKnown RBP8.7□□□□□ -1.02
CBWD1-227ENST00000618361 RTN1Q16799 776 aa8.7□□□□□ -1.02
CBWD1-227ENST00000618361 PFKFB3Q16875 520 aaPredicted RBP8.7□□□□□ -1.02
CBWD1-227ENST00000618361 TTC22Q5TAA0 569 aa8.7□□□□□ -1.02
CBWD1-227ENST00000618361 LRCH2Q5VUJ6 765 aa8.7□□□□□ -1.02
CBWD1-227ENST00000618361 C1orf228Q6PIY5 440 aa8.7□□□□□ -1.02
CBWD1-227ENST00000618361 LRSAM1Q6UWE0 723 aa8.7□□□□□ -1.02
CBWD1-227ENST00000618361 LONP2Q86WA8 852 aa8.7□□□□□ -1.02
CBWD1-227ENST00000618361 RAB11FIP4Q86YS3 637 aa8.7□□□□□ -1.02
CBWD1-227ENST00000618361 KSR1Q8IVT5 923 aa8.7□□□□□ -1.02
CBWD1-227ENST00000618361 BICD2Q8TD16 824 aa8.7□□□□□ -1.02
CBWD1-227ENST00000618361 PSPC1Q8WXF1 523 aaKnown RBP8.7□□□□□ -1.02
CBWD1-227ENST00000618361 SLC7A3Q8WY07 619 aa8.7□□□□□ -1.02
CBWD1-227ENST00000618361 MSANTD3Q96H12 275 aa8.7□□□□□ -1.02
CBWD1-227ENST00000618361 LOXL4Q96JB6 756 aa8.7□□□□□ -1.02
CBWD1-227ENST00000618361 CLSTN3Q9BQT9 956 aa8.7□□□□□ -1.02
CBWD1-227ENST00000618361 MIOSQ9NXC5 875 aa8.7□□□□□ -1.02
CBWD1-227ENST00000618361 FARP1Q9Y4F1 1045 aaPredicted RBP8.7□□□□□ -1.02
CBWD1-227ENST00000618361 MIA3Q5JRA6 1907 aa8.7□□□□□ -1.02
CBWD1-227ENST00000618361 DDX11L8A8MPP1 907 aa8.69□□□□□ -1.02
CBWD1-227ENST00000618361 F8W810 466 aa8.69□□□□□ -1.02
CBWD1-227ENST00000618361 CCL16O15467 120 aa8.69□□□□□ -1.02
CBWD1-227ENST00000618361 CHMP2AO43633 222 aa8.69□□□□□ -1.02
CBWD1-227ENST00000618361 DKC1O60832 514 aaKnown RBP eCLIP8.69□□□□□ -1.02
CBWD1-227ENST00000618361 PSMD10O75832 226 aa8.69□□□□□ -1.02
CBWD1-227ENST00000618361 MICAL2O94851 1124 aa8.69□□□□□ -1.02
CBWD1-227ENST00000618361 ERLIN2O94905 339 aa8.69□□□□□ -1.02
CBWD1-227ENST00000618361 RPL17P18621 184 aaKnown RBP8.69□□□□□ -1.02
CBWD1-227ENST00000618361 SCNN1GP51170 649 aa8.69□□□□□ -1.02
CBWD1-227ENST00000618361 PSMC5P62195 406 aa8.69□□□□□ -1.02
CBWD1-227ENST00000618361 POU5F1BQ06416 359 aa8.69□□□□□ -1.02
CBWD1-227ENST00000618361 ELAVL2Q12926 359 aaKnown RBP8.69□□□□□ -1.02
CBWD1-227ENST00000618361 GRIK3Q13003 919 aa8.69□□□□□ -1.02
CBWD1-227ENST00000618361 RAB33AQ14088 237 aa8.69□□□□□ -1.02
CBWD1-227ENST00000618361 PABPC1LQ4VXU2 614 aaKnown RBP8.69□□□□□ -1.02
CBWD1-227ENST00000618361 RTP2Q5QGT7 225 aa8.69□□□□□ -1.02
CBWD1-227ENST00000618361 NOTUMQ6P988 496 aa8.69□□□□□ -1.02
CBWD1-227ENST00000618361 UNQ6494/PRO21346Q6UXR6 183 aa8.69□□□□□ -1.02
CBWD1-227ENST00000618361 ANO5Q75V66 913 aa8.69□□□□□ -1.02
CBWD1-227ENST00000618361 CEP68Q76N32 757 aa8.69□□□□□ -1.02
CBWD1-227ENST00000618361 MIER3Q7Z3K6 550 aa8.69□□□□□ -1.02
CBWD1-227ENST00000618361 GLYCTKQ8IVS8 523 aa8.69□□□□□ -1.02
CBWD1-227ENST00000618361 SPEM1Q8N4L4 309 aa8.69□□□□□ -1.02
CBWD1-227ENST00000618361 GSTCDQ8NEC7 633 aa8.69□□□□□ -1.02
CBWD1-227ENST00000618361 LNX1Q8TBB1 728 aaPredicted RBP8.69□□□□□ -1.02
CBWD1-227ENST00000618361 TCP11Q8WWU5 503 aa8.69□□□□□ -1.02
CBWD1-227ENST00000618361 PRPF31Q8WWY3 499 aaKnown RBP8.69□□□□□ -1.02
CBWD1-227ENST00000618361 FAM3CQ92520 227 aa8.69□□□□□ -1.02
CBWD1-227ENST00000618361 IRF7Q92985 503 aa8.69□□□□□ -1.02
CBWD1-227ENST00000618361 B3GALT6Q96L58 329 aa8.69□□□□□ -1.02
CBWD1-227ENST00000618361 TTPALQ9BTX7 342 aa8.69□□□□□ -1.02
CBWD1-227ENST00000618361 CSRNP2Q9H175 543 aa8.69□□□□□ -1.02
CBWD1-227ENST00000618361 DHX33Q9H6R0 707 aaKnown RBP8.69□□□□□ -1.02
CBWD1-227ENST00000618361 LMAN1LQ9HAT1 526 aa8.69□□□□□ -1.02
CBWD1-227ENST00000618361 DNMT3BQ9UBC3 853 aaKnown RBP8.69□□□□□ -1.02
CBWD1-227ENST00000618361 POLIQ9UNA4 740 aa8.69□□□□□ -1.02
CBWD1-227ENST00000618361 MRPS23Q9Y3D9 190 aaKnown RBP8.69□□□□□ -1.02
CBWD1-227ENST00000618361 ZBTB43O43298 467 aa8.68□□□□□ -1.02
CBWD1-227ENST00000618361 EDIL3O43854 480 aa8.68□□□□□ -1.02
CBWD1-227ENST00000618361 IGHDP01880 384 aa8.68□□□□□ -1.02
CBWD1-227ENST00000618361 ZNF806P0C7X5 589 aa8.68□□□□□ -1.02
CBWD1-227ENST00000618361 SRGAP2CP0DJJ0 459 aa8.68□□□□□ -1.02
CBWD1-227ENST00000618361 CHRNB1P11230 501 aa8.68□□□□□ -1.02
CBWD1-227ENST00000618361 RFC5P40937 340 aa8.68□□□□□ -1.02
CBWD1-227ENST00000618361 SPIRE1Q08AE8 756 aa8.68□□□□□ -1.02
CBWD1-227ENST00000618361 LAMTOR4Q0VGL1 99 aa8.68□□□□□ -1.02
CBWD1-227ENST00000618361 HSP90AA2PQ14568 343 aaPredicted RBP8.68□□□□□ -1.02
CBWD1-227ENST00000618361 PSMD5Q16401 504 aa8.68□□□□□ -1.02
CBWD1-227ENST00000618361 Q4G0T1 1027 aa8.68□□□□□ -1.02
CBWD1-227ENST00000618361 AXDND1Q5T1B0 1012 aaPredicted RBP8.68□□□□□ -1.02
CBWD1-227ENST00000618361 TANGO2Q6ICL3 276 aa8.68□□□□□ -1.02
CBWD1-227ENST00000618361 PRSS55Q6UWB4 352 aaPredicted RBP8.68□□□□□ -1.02
CBWD1-227ENST00000618361 IFNLR1Q8IU57 520 aaPredicted RBP8.68□□□□□ -1.02
CBWD1-227ENST00000618361 MAP4K3Q8IVH8 894 aa8.68□□□□□ -1.02
CBWD1-227ENST00000618361 SLC7A14Q8TBB6 771 aa8.68□□□□□ -1.02
CBWD1-227ENST00000618361 KIF12Q96FN5 646 aa8.68□□□□□ -1.02
CBWD1-227ENST00000618361 CCDC136Q96JN2 1154 aa8.68□□□□□ -1.02
CBWD1-227ENST00000618361 ZFP42Q96MM3 310 aa8.68□□□□□ -1.02
CBWD1-227ENST00000618361 TRMT61BQ9BVS5 477 aaKnown RBP8.68□□□□□ -1.02
CBWD1-227ENST00000618361 LSM14BQ9BX40 385 aaKnown RBP8.68□□□□□ -1.02
CBWD1-227ENST00000618361 EIF2AQ9BY44 585 aaKnown RBP8.68□□□□□ -1.02
CBWD1-227ENST00000618361 PLA2G2FQ9BZM2 168 aa8.68□□□□□ -1.02
CBWD1-227ENST00000618361 BRD9Q9H8M2 597 aa8.68□□□□□ -1.02
CBWD1-227ENST00000618361 MINDY3Q9H8M7 445 aa8.68□□□□□ -1.02
CBWD1-227ENST00000618361 ZFP14Q9HCL3 533 aa8.68□□□□□ -1.02
CBWD1-227ENST00000618361 DAXXQ9UER7 740 aaPredicted RBP8.68□□□□□ -1.02
CBWD1-227ENST00000618361 NDRG2Q9UN36 371 aaKnown RBP8.68□□□□□ -1.02
CBWD1-227ENST00000618361 COL4A3Q01955 1670 aa8.68□□□□□ -1.02
CBWD1-227ENST00000618361 CYP3A7-CYP3A51PA0A087WV96 503 aa8.67□□□□□ -1.02
CBWD1-227ENST00000618361 CCDC196A0A1B0GTZ2 297 aa8.67□□□□□ -1.02
CBWD1-227ENST00000618361 TMEM150BA6NC51 233 aa8.67□□□□□ -1.02
CBWD1-227ENST00000618361 C1QTNF9BB2RNN3 333 aa8.67□□□□□ -1.02
CBWD1-227ENST00000618361 CHURC1-FNTBB4DL54 471 aa8.67□□□□□ -1.02
CBWD1-227ENST00000618361 SLC27A2O14975 620 aa8.67□□□□□ -1.02
CBWD1-227ENST00000618361 TSPAN1O60635 241 aa8.67□□□□□ -1.02
CBWD1-227ENST00000618361 KCNK5O95279 499 aa8.67□□□□□ -1.02
CBWD1-227ENST00000618361 RHOP08100 348 aa8.67□□□□□ -1.02
CBWD1-227ENST00000618361 C1QTNF9P0C862 333 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms