RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 HELQQ8TDG4 1101 aa13.36□□□□□ -0.27
CIITA-212ENST00000618207 AENQ8WTP8 325 aaKnown RBP13.36□□□□□ -0.27
CIITA-212ENST00000618207 ACBD3Q9H3P7 528 aa13.36□□□□□ -0.27
CIITA-212ENST00000618207 SPON1Q9HCB6 807 aa13.36□□□□□ -0.27
CIITA-212ENST00000618207 AGO2Q9UKV8 859 aaKnown RBP13.36□□□□□ -0.27
CIITA-212ENST00000618207 PTPRJQ12913 1337 aa13.36□□□□□ -0.27
CIITA-212ENST00000618207 ARID2Q68CP9 1835 aa13.36□□□□□ -0.27
CIITA-212ENST00000618207 PGRMC1O00264 195 aaKnown RBP13.36□□□□□ -0.27
CIITA-212ENST00000618207 SYF2O95926 243 aaKnown RBP13.36□□□□□ -0.27
CIITA-212ENST00000618207 DNAJC21Q5F1R6 531 aaKnown RBP13.36□□□□□ -0.27
CIITA-212ENST00000618207 RIOX2Q8IUF8 465 aa13.36□□□□□ -0.27
CIITA-212ENST00000618207 SLC17A8Q8NDX2 589 aa13.36□□□□□ -0.27
CIITA-212ENST00000618207 CASKIN2Q8WXE0 1202 aa13.36□□□□□ -0.27
CIITA-212ENST00000618207 RNF14Q9UBS8 474 aa13.36□□□□□ -0.27
CIITA-212ENST00000618207 MAFBQ9Y5Q3 323 aaPredicted RBP13.36□□□□□ -0.27
CIITA-212ENST00000618207 ALG6Q9Y672 507 aa13.36□□□□□ -0.27
CIITA-212ENST00000618207 SBF1O95248 1867 aa13.36□□□□□ -0.27
CIITA-212ENST00000618207 GOLGA6BA6NDN3 693 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 NOP56O00567 594 aaKnown RBP13.35□□□□□ -0.27
CIITA-212ENST00000618207 P4HA2O15460 535 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 SART1O43290 800 aaKnown RBP13.35□□□□□ -0.27
CIITA-212ENST00000618207 CYP2C8P10632 490 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 CYP11B1P15538 503 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 YBX3P16989 372 aaKnown RBP eCLIP13.35□□□□□ -0.27
CIITA-212ENST00000618207 OSTNP61366 133 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 TNNC1P63316 161 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 IFT20Q8IY31 132 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 SYCE1Q8N0S2 351 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 KRT35Q92764 455 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 OPTNQ96CV9 577 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 CDCA5Q96FF9 252 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 YY1AP1Q9H869 796 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 FAM204AQ9H8W3 233 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.35□□□□□ -0.27
CIITA-212ENST00000618207 STAM2O75886 525 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 PDE6CP51160 858 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 FMO1Q01740 532 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 DCAF12L1Q5VU92 463 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 PASD1Q8IV76 773 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 FAM71AQ8IYT1 594 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 ALG3Q92685 438 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 PBKQ96KB5 322 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 MFSD14AQ96MC6 490 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.35□□□□□ -0.27
CIITA-212ENST00000618207 MSTO1Q9BUK6 570 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 C17orf75Q9HAS0 396 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 STXBP5LQ9Y2K9 1186 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 EVPLQ92817 2033 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 CSDE1O75534 798 aaKnown RBP13.35□□□□□ -0.27
CIITA-212ENST00000618207 PIK3CAP42336 1068 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 EPHB4P54760 987 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 IGBP1P78318 339 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 PPATQ06203 517 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 SLFN11Q7Z7L1 901 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 PRPF31Q8WWY3 499 aaKnown RBP13.35□□□□□ -0.27
CIITA-212ENST00000618207 SHC3Q92529 594 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 UPF1Q92900 1129 aaKnown RBP eCLIP13.35□□□□□ -0.27
CIITA-212ENST00000618207 ZNF653Q96CK0 615 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 PORCNQ9H237 461 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 DPH5Q9H2P9 285 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 DHX33Q9H6R0 707 aaKnown RBP13.35□□□□□ -0.27
CIITA-212ENST00000618207 AZI2Q9H6S1 392 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 PDGFCQ9NRA1 345 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 RBAKQ9NYW8 714 aaPredicted RBP13.35□□□□□ -0.27
CIITA-212ENST00000618207 NOCTQ9UK39 431 aaKnown RBP13.35□□□□□ -0.27
CIITA-212ENST00000618207 INTUQ9ULD6 942 aa13.35□□□□□ -0.27
CIITA-212ENST00000618207 WDR90Q96KV7 1748 aa13.34□□□□□ -0.27
CIITA-212ENST00000618207 MYPNQ86TC9 1320 aa13.34□□□□□ -0.27
CIITA-212ENST00000618207 A0A0A6YYK5 440 aaPredicted RBP13.34□□□□□ -0.27
CIITA-212ENST00000618207 AGPSO00116 658 aa13.34□□□□□ -0.27
CIITA-212ENST00000618207 RFX1P22670 979 aa13.34□□□□□ -0.27
CIITA-212ENST00000618207 ANXA13P27216 316 aa13.34□□□□□ -0.27
CIITA-212ENST00000618207 NF2P35240 595 aa13.34□□□□□ -0.27
CIITA-212ENST00000618207 TNFSF9P41273 254 aa13.34□□□□□ -0.27
CIITA-212ENST00000618207 GPC5P78333 572 aa13.34□□□□□ -0.27
CIITA-212ENST00000618207 CAPSQ13938 189 aa13.34□□□□□ -0.27
CIITA-212ENST00000618207 DAB2IPQ5VWQ8 1189 aa13.34□□□□□ -0.27
CIITA-212ENST00000618207 ERO1BQ86YB8 467 aa13.34□□□□□ -0.27
CIITA-212ENST00000618207 ANKRD13AQ8IZ07 590 aa13.34□□□□□ -0.27
CIITA-212ENST00000618207 CPA5Q8WXQ8 436 aa13.34□□□□□ -0.27
CIITA-212ENST00000618207 HES6Q96HZ4 224 aa13.34□□□□□ -0.27
CIITA-212ENST00000618207 C1orf112Q9NSG2 853 aa13.34□□□□□ -0.27
CIITA-212ENST00000618207 GEMIN8Q9NWZ8 242 aaKnown RBP13.34□□□□□ -0.27
CIITA-212ENST00000618207 SUCLA2Q9P2R7 463 aaPredicted RBP13.34□□□□□ -0.27
CIITA-212ENST00000618207 TTI1O43156 1089 aa13.34□□□□□ -0.27
CIITA-212ENST00000618207 HLA-DRAP01903 254 aa13.34□□□□□ -0.27
CIITA-212ENST00000618207 TDRD10Q5VZ19 366 aaKnown RBP13.34□□□□□ -0.27
CIITA-212ENST00000618207 SEPT1Q8WYJ6 367 aa13.34□□□□□ -0.27
CIITA-212ENST00000618207 HVCN1Q96D96 273 aa13.34□□□□□ -0.27
CIITA-212ENST00000618207 RNPC3Q96LT9 517 aaKnown RBP13.34□□□□□ -0.27
CIITA-212ENST00000618207 FBXL18Q96ME1 805 aa13.34□□□□□ -0.27
CIITA-212ENST00000618207 NUP85Q9BW27 656 aa13.34□□□□□ -0.27
CIITA-212ENST00000618207 EFCC1Q9HA90 598 aa13.34□□□□□ -0.27
CIITA-212ENST00000618207 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.34□□□□□ -0.27
CIITA-212ENST00000618207 RBPJLQ9UBG7 517 aa13.34□□□□□ -0.27
CIITA-212ENST00000618207 DNAH12Q6ZR08 3092 aa13.33□□□□□ -0.27
CIITA-212ENST00000618207 ZC3H4Q9UPT8 1303 aaKnown RBP13.33□□□□□ -0.28
CIITA-212ENST00000618207 A0A0G2JLL6 359 aaPredicted RBP13.33□□□□□ -0.28
CIITA-212ENST00000618207 EXTL3O43909 919 aa13.33□□□□□ -0.28
CIITA-212ENST00000618207 RTN2O75298 545 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms