RNA–Protein interactions for RNA: ENST00000617999.4

UPK1A-204, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPK1A, Length 1,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-204ENST00000617999 DBF4BQ8NFT6 615 aa16.62■□□□□ 0.25
UPK1A-204ENST00000617999 GRPEL1Q9HAV7 217 aa16.62■□□□□ 0.25
UPK1A-204ENST00000617999 CPSF3Q9UKF6 684 aaKnown RBP16.62■□□□□ 0.25
UPK1A-204ENST00000617999 FRMD4BQ9Y2L6 1034 aa16.62■□□□□ 0.25
UPK1A-204ENST00000617999 HES2Q9Y543 173 aa16.62■□□□□ 0.25
UPK1A-204ENST00000617999 IPPQ9Y573 584 aa16.62■□□□□ 0.25
UPK1A-204ENST00000617999 FNDC1Q4ZHG4 1894 aaPredicted RBP16.62■□□□□ 0.25
UPK1A-204ENST00000617999 MAPK13O15264 365 aa16.61■□□□□ 0.25
UPK1A-204ENST00000617999 TIMP1P01033 207 aa16.61■□□□□ 0.25
UPK1A-204ENST00000617999 BFSP1Q12934 665 aa16.61■□□□□ 0.25
UPK1A-204ENST00000617999 ENOX2Q16206 610 aaKnown RBP16.61■□□□□ 0.25
UPK1A-204ENST00000617999 DEFB128Q7Z7B8 93 aa16.61■□□□□ 0.25
UPK1A-204ENST00000617999 APOL6Q9BWW8 343 aa16.61■□□□□ 0.25
UPK1A-204ENST00000617999 CHST12Q9NRB3 414 aa16.61■□□□□ 0.25
UPK1A-204ENST00000617999 TOPORSQ9NS56 1045 aaPredicted RBP16.61■□□□□ 0.25
UPK1A-204ENST00000617999 FAM105AQ9NUU6 356 aa16.61■□□□□ 0.25
UPK1A-204ENST00000617999 INTS13Q9NVM9 706 aa16.61■□□□□ 0.25
UPK1A-204ENST00000617999 RBAKQ9NYW8 714 aaPredicted RBP16.61■□□□□ 0.25
UPK1A-204ENST00000617999 MAGEC2Q9UBF1 373 aaPredicted RBP16.61■□□□□ 0.25
UPK1A-204ENST00000617999 ARMCX3Q9UH62 379 aaPredicted RBP16.61■□□□□ 0.25
UPK1A-204ENST00000617999 LIMA1Q9UHB6 759 aaKnown RBP16.61■□□□□ 0.25
UPK1A-204ENST00000617999 PTPRJQ12913 1337 aa16.61■□□□□ 0.25
UPK1A-204ENST00000617999 MEIS3P2A8K0S8 358 aa16.6■□□□□ 0.25
UPK1A-204ENST00000617999 RECQL4O94761 1208 aa16.6■□□□□ 0.25
UPK1A-204ENST00000617999 PARNO95453 639 aaKnown RBP16.6■□□□□ 0.25
UPK1A-204ENST00000617999 GNA14O95837 355 aa16.6■□□□□ 0.25
UPK1A-204ENST00000617999 STAG3L1P0CL83 205 aa16.6■□□□□ 0.25
UPK1A-204ENST00000617999 RAG1P15918 1043 aa16.6■□□□□ 0.25
UPK1A-204ENST00000617999 MTIF2P46199 727 aaKnown RBP16.6■□□□□ 0.25
UPK1A-204ENST00000617999 COPB1P53618 953 aaKnown RBP16.6■□□□□ 0.25
UPK1A-204ENST00000617999 FANCCQ00597 558 aa16.6■□□□□ 0.25
UPK1A-204ENST00000617999 NCBP1Q09161 790 aaKnown RBP16.6■□□□□ 0.25
UPK1A-204ENST00000617999 DCAF17Q5H9S7 520 aaPredicted RBP16.6■□□□□ 0.25
UPK1A-204ENST00000617999 MIIPQ5JXC2 388 aa16.6■□□□□ 0.25
UPK1A-204ENST00000617999 C1orf220Q5T0J3 134 aa16.6■□□□□ 0.25
UPK1A-204ENST00000617999 FRMD5Q7Z6J6 570 aa16.6■□□□□ 0.25
UPK1A-204ENST00000617999 SEPT8Q92599 483 aa16.6■□□□□ 0.25
UPK1A-204ENST00000617999 SLC35C1Q96A29 364 aa16.6■□□□□ 0.25
UPK1A-204ENST00000617999 SNX27Q96L92 541 aa16.6■□□□□ 0.25
UPK1A-204ENST00000617999 ADAM2Q99965 735 aa16.6■□□□□ 0.25
UPK1A-204ENST00000617999 TRIM6Q9C030 488 aaPredicted RBP16.6■□□□□ 0.25
UPK1A-204ENST00000617999 CXCL16Q9H2A7 254 aa16.6■□□□□ 0.25
UPK1A-204ENST00000617999 SNTG2Q9NY99 539 aa16.6■□□□□ 0.25
UPK1A-204ENST00000617999 PCDHB2Q9Y5E7 798 aa16.6■□□□□ 0.25
UPK1A-204ENST00000617999 KIAA1671Q9BY89 1806 aa16.6■□□□□ 0.25
UPK1A-204ENST00000617999 LRRIQ3A6PVS8 624 aaPredicted RBP16.59■□□□□ 0.25
UPK1A-204ENST00000617999 LDHAP00338 332 aaKnown RBP16.59■□□□□ 0.25
UPK1A-204ENST00000617999 CSF2RAP15509 400 aa16.59■□□□□ 0.25
UPK1A-204ENST00000617999 IBSPP21815 317 aaPredicted RBP16.59■□□□□ 0.25
UPK1A-204ENST00000617999 RFC2P35250 354 aa16.59■□□□□ 0.25
UPK1A-204ENST00000617999 DLG4P78352 724 aa16.59■□□□□ 0.25
UPK1A-204ENST00000617999 PSMD6Q15008 389 aa16.59■□□□□ 0.25
UPK1A-204ENST00000617999 MAN2A1Q16706 1144 aa16.59■□□□□ 0.25
UPK1A-204ENST00000617999 MFSD5Q6N075 450 aa16.59■□□□□ 0.25
UPK1A-204ENST00000617999 SARM1Q6SZW1 724 aa16.59■□□□□ 0.25
UPK1A-204ENST00000617999 INTS8Q75QN2 995 aaKnown RBP16.59■□□□□ 0.25
UPK1A-204ENST00000617999 APBB1IPQ7Z5R6 666 aaPredicted RBP16.59■□□□□ 0.25
UPK1A-204ENST00000617999 RTN4RL1Q86UN2 441 aaPredicted RBP16.59■□□□□ 0.25
UPK1A-204ENST00000617999 CREBRFQ8IUR6 639 aa16.59■□□□□ 0.25
UPK1A-204ENST00000617999 EFCAB13Q8IY85 973 aa16.59■□□□□ 0.25
UPK1A-204ENST00000617999 APBB2Q92870 758 aa16.59■□□□□ 0.25
UPK1A-204ENST00000617999 MFSD14AQ96MC6 490 aa16.59■□□□□ 0.25
UPK1A-204ENST00000617999 TUBGCP2Q9BSJ2 902 aa16.59■□□□□ 0.25
UPK1A-204ENST00000617999 HTATIP2Q9BUP3 242 aa16.59■□□□□ 0.25
UPK1A-204ENST00000617999 TSPYL2Q9H2G4 693 aaPredicted RBP16.59■□□□□ 0.25
UPK1A-204ENST00000617999 RNF39Q9H2S5 420 aa16.59■□□□□ 0.25
UPK1A-204ENST00000617999 METTL14Q9HCE5 456 aaKnown RBP16.59■□□□□ 0.25
UPK1A-204ENST00000617999 KIAA1586Q9HCI6 787 aa16.59■□□□□ 0.25
UPK1A-204ENST00000617999 ZNF233A6NK53 670 aa16.58■□□□□ 0.24
UPK1A-204ENST00000617999 C9IYK1 514 aa16.58■□□□□ 0.24
UPK1A-204ENST00000617999 CLTAP09496 248 aa16.58■□□□□ 0.24
UPK1A-204ENST00000617999 PRKCSHP14314 528 aaPredicted RBP16.58■□□□□ 0.24
UPK1A-204ENST00000617999 ZSCAN20P17040 1043 aaPredicted RBP16.58■□□□□ 0.24
UPK1A-204ENST00000617999 SYN1P17600 705 aa16.58■□□□□ 0.24
UPK1A-204ENST00000617999 RAB27AP51159 221 aa16.58■□□□□ 0.24
UPK1A-204ENST00000617999 VAMP7P51809 220 aa16.58■□□□□ 0.24
UPK1A-204ENST00000617999 UVSSAQ2YD98 709 aa16.58■□□□□ 0.24
UPK1A-204ENST00000617999 LMBRD2Q68DH5 695 aaPredicted RBP16.58■□□□□ 0.24
UPK1A-204ENST00000617999 ZNF598Q86UK7 904 aaKnown RBP16.58■□□□□ 0.24
UPK1A-204ENST00000617999 LPPQ93052 612 aa16.58■□□□□ 0.24
UPK1A-204ENST00000617999 CCDC127Q96BQ5 260 aa16.58■□□□□ 0.24
UPK1A-204ENST00000617999 CGRRF1Q99675 332 aa16.58■□□□□ 0.24
UPK1A-204ENST00000617999 CCDC94Q9BW85 323 aaPredicted RBP16.58■□□□□ 0.24
UPK1A-204ENST00000617999 TRAIPQ9BWF2 469 aa16.58■□□□□ 0.24
UPK1A-204ENST00000617999 PDE11AQ9HCR9 933 aa16.58■□□□□ 0.24
UPK1A-204ENST00000617999 IFNKQ9P0W0 207 aa16.58■□□□□ 0.24
UPK1A-204ENST00000617999 ZMYND8Q9ULU4 1186 aaPredicted RBP16.58■□□□□ 0.24
UPK1A-204ENST00000617999 A0A1B0GTH6 734 aa16.57■□□□□ 0.24
UPK1A-204ENST00000617999 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.57■□□□□ 0.24
UPK1A-204ENST00000617999 LGALS16A8MUM7 142 aa16.57■□□□□ 0.24
UPK1A-204ENST00000617999 NFICP08651 508 aa16.57■□□□□ 0.24
UPK1A-204ENST00000617999 KRT13P13646 458 aa16.57■□□□□ 0.24
UPK1A-204ENST00000617999 CDK11BP21127 795 aaKnown RBP16.57■□□□□ 0.24
UPK1A-204ENST00000617999 AKAP5P24588 427 aa16.57■□□□□ 0.24
UPK1A-204ENST00000617999 PPP3CAQ08209 521 aa16.57■□□□□ 0.24
UPK1A-204ENST00000617999 PTPN21Q16825 1174 aa16.57■□□□□ 0.24
UPK1A-204ENST00000617999 SLC10A6Q3KNW5 377 aa16.57■□□□□ 0.24
UPK1A-204ENST00000617999 TCERG1LQ5VWI1 586 aa16.57■□□□□ 0.24
UPK1A-204ENST00000617999 CNKSR3Q6P9H4 555 aa16.57■□□□□ 0.24
UPK1A-204ENST00000617999 ECHDC2Q86YB7 292 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms