RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 MORC4Q8TE76 937 aa16.94■□□□□ 0.3
NR1H3-235ENST00000616973 OPTNQ96CV9 577 aa16.94■□□□□ 0.3
NR1H3-235ENST00000616973 PCDHB18PQ96TA0 734 aa16.94■□□□□ 0.3
NR1H3-235ENST00000616973 MROH8Q9H579 483 aa16.94■□□□□ 0.3
NR1H3-235ENST00000616973 TXNRD2Q9NNW7 524 aa16.94■□□□□ 0.3
NR1H3-235ENST00000616973 A0A0U1RQG5 324 aaPredicted RBP16.94■□□□□ 0.3
NR1H3-235ENST00000616973 POLR3GO15318 223 aaPredicted RBP16.94■□□□□ 0.3
NR1H3-235ENST00000616973 GAS2O43903 313 aaKnown RBP16.94■□□□□ 0.3
NR1H3-235ENST00000616973 CLSTN1O94985 981 aa16.94■□□□□ 0.3
NR1H3-235ENST00000616973 YBX3P16989 372 aaKnown RBP eCLIP16.94■□□□□ 0.3
NR1H3-235ENST00000616973 EPHX2P34913 555 aa16.94■□□□□ 0.3
NR1H3-235ENST00000616973 FMO1Q01740 532 aa16.94■□□□□ 0.3
NR1H3-235ENST00000616973 CDR2Q01850 454 aa16.94■□□□□ 0.3
NR1H3-235ENST00000616973 NNTQ13423 1086 aa16.94■□□□□ 0.3
NR1H3-235ENST00000616973 LY6KQ17RY6 165 aa16.94■□□□□ 0.3
NR1H3-235ENST00000616973 ZACNQ401N2 412 aa16.94■□□□□ 0.3
NR1H3-235ENST00000616973 CELF3Q5SZQ8 465 aaKnown RBP16.94■□□□□ 0.3
NR1H3-235ENST00000616973 GPAT2Q6NUI2 795 aa16.94■□□□□ 0.3
NR1H3-235ENST00000616973 C11orf63Q6NUN7 778 aa16.94■□□□□ 0.3
NR1H3-235ENST00000616973 ARMC9Q7Z3E5 817 aa16.94■□□□□ 0.3
NR1H3-235ENST00000616973 FAM71BQ8TC56 605 aa16.94■□□□□ 0.3
NR1H3-235ENST00000616973 BBXQ8WY36 941 aaPredicted RBP16.94■□□□□ 0.3
NR1H3-235ENST00000616973 ZNF516Q92618 1163 aa16.94■□□□□ 0.3
NR1H3-235ENST00000616973 KRT12Q99456 494 aa16.94■□□□□ 0.3
NR1H3-235ENST00000616973 SYT17Q9BSW7 474 aa16.94■□□□□ 0.3
NR1H3-235ENST00000616973 AZI2Q9H6S1 392 aa16.94■□□□□ 0.3
NR1H3-235ENST00000616973 COG5Q9UP83 839 aa16.94■□□□□ 0.3
NR1H3-235ENST00000616973 A0A0B4J269 797 aa16.93■□□□□ 0.3
NR1H3-235ENST00000616973 DDX3YO15523 660 aaKnown RBP16.93■□□□□ 0.3
NR1H3-235ENST00000616973 ADCY3O60266 1144 aa16.93■□□□□ 0.3
NR1H3-235ENST00000616973 C4BPAP04003 597 aaKnown RBP16.93■□□□□ 0.3
NR1H3-235ENST00000616973 CYP11B1P15538 503 aa16.93■□□□□ 0.3
NR1H3-235ENST00000616973 PDE6CP51160 858 aa16.93■□□□□ 0.3
NR1H3-235ENST00000616973 CAPSQ13938 189 aa16.93■□□□□ 0.3
NR1H3-235ENST00000616973 KCTD2Q14681 263 aa16.93■□□□□ 0.3
NR1H3-235ENST00000616973 Q3C1V9 767 aa16.93■□□□□ 0.3
NR1H3-235ENST00000616973 CRELD2Q6UXH1 353 aaPredicted RBP16.93■□□□□ 0.3
NR1H3-235ENST00000616973 PLPPR4Q7Z2D5 763 aa16.93■□□□□ 0.3
NR1H3-235ENST00000616973 SLC47A2Q86VL8 602 aa16.93■□□□□ 0.3
NR1H3-235ENST00000616973 GSPT2Q8IYD1 628 aaKnown RBP16.93■□□□□ 0.3
NR1H3-235ENST00000616973 EIF1ADQ8N9N8 165 aaKnown RBP16.93■□□□□ 0.3
NR1H3-235ENST00000616973 SHCBP1Q8NEM2 672 aa16.93■□□□□ 0.3
NR1H3-235ENST00000616973 TATDN2Q93075 761 aa16.93■□□□□ 0.3
NR1H3-235ENST00000616973 CAVIN3Q969G5 261 aa16.93■□□□□ 0.3
NR1H3-235ENST00000616973 FNBP1Q96RU3 617 aa16.93■□□□□ 0.3
NR1H3-235ENST00000616973 MMP19Q99542 508 aa16.93■□□□□ 0.3
NR1H3-235ENST00000616973 GPR20Q99678 358 aa16.93■□□□□ 0.3
NR1H3-235ENST00000616973 HAPLN2Q9GZV7 340 aa16.93■□□□□ 0.3
NR1H3-235ENST00000616973 R3HDMLQ9H3Y0 253 aa16.93■□□□□ 0.3
NR1H3-235ENST00000616973 NOC2LQ9Y3T9 749 aaKnown RBP16.93■□□□□ 0.3
NR1H3-235ENST00000616973 ADGRA2Q96PE1 1338 aa16.93■□□□□ 0.3
NR1H3-235ENST00000616973 ZC3H4Q9UPT8 1303 aaKnown RBP16.93■□□□□ 0.3
NR1H3-235ENST00000616973 GLI1P08151 1106 aa16.92■□□□□ 0.3
NR1H3-235ENST00000616973 EFNA5P52803 228 aa16.92■□□□□ 0.3
NR1H3-235ENST00000616973 NLRP11P59045 1033 aaKnown RBP16.92■□□□□ 0.3
NR1H3-235ENST00000616973 HSP90B2PQ58FF3 399 aa16.92■□□□□ 0.3
NR1H3-235ENST00000616973 IER5Q5VY09 327 aa16.92■□□□□ 0.3
NR1H3-235ENST00000616973 ZPBP2Q6X784 338 aa16.92■□□□□ 0.3
NR1H3-235ENST00000616973 TCP11Q8WWU5 503 aa16.92■□□□□ 0.3
NR1H3-235ENST00000616973 DDX1Q92499 740 aaKnown RBP16.92■□□□□ 0.3
NR1H3-235ENST00000616973 DHX38Q92620 1227 aaKnown RBP16.92■□□□□ 0.3
NR1H3-235ENST00000616973 CARD9Q9H257 536 aa16.92■□□□□ 0.3
NR1H3-235ENST00000616973 ZCCHC17Q9NP64 241 aaKnown RBP16.92■□□□□ 0.3
NR1H3-235ENST00000616973 C1orf112Q9NSG2 853 aa16.92■□□□□ 0.3
NR1H3-235ENST00000616973 HEXIM1O94992 359 aaKnown RBP16.92■□□□□ 0.3
NR1H3-235ENST00000616973 ARIH2O95376 493 aa16.92■□□□□ 0.3
NR1H3-235ENST00000616973 CLUL1Q15846 466 aa16.92■□□□□ 0.3
NR1H3-235ENST00000616973 LDLRAD1Q5T700 205 aa16.92■□□□□ 0.3
NR1H3-235ENST00000616973 GTF3C2Q8WUA4 911 aaPredicted RBP16.92■□□□□ 0.3
NR1H3-235ENST00000616973 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.92■□□□□ 0.36e-13■■■■■ 112.3
NR1H3-235ENST00000616973 MSTO1Q9BUK6 570 aa16.92■□□□□ 0.3
NR1H3-235ENST00000616973 PLXNB2O15031 1838 aa16.91■□□□□ 0.3
NR1H3-235ENST00000616973 IGKV6-21A0A0C4DH24 114 aa16.91■□□□□ 0.3
NR1H3-235ENST00000616973 MIF4GDA9UHW6 222 aaKnown RBP16.91■□□□□ 0.3
NR1H3-235ENST00000616973 BHMG1C9JSJ3 638 aaPredicted RBP16.91■□□□□ 0.3
NR1H3-235ENST00000616973 CYP1A2P05177 515 aa16.91■□□□□ 0.3
NR1H3-235ENST00000616973 PGK2P07205 417 aa16.91■□□□□ 0.3
NR1H3-235ENST00000616973 MMEP08473 750 aa16.91■□□□□ 0.3
NR1H3-235ENST00000616973 RNASE9P60153 205 aaKnown RBP16.91■□□□□ 0.3
NR1H3-235ENST00000616973 PAK2Q13177 524 aa16.91■□□□□ 0.3
NR1H3-235ENST00000616973 WDR44Q5JSH3 913 aa16.91■□□□□ 0.3
NR1H3-235ENST00000616973 TAF3Q5VWG9 929 aa16.91■□□□□ 0.3
NR1H3-235ENST00000616973 CCDC62Q6P9F0 684 aa16.91■□□□□ 0.3
NR1H3-235ENST00000616973 EEPD1Q7L9B9 569 aa16.91■□□□□ 0.3
NR1H3-235ENST00000616973 ATP8B4Q8TF62 1192 aa16.91■□□□□ 0.3
NR1H3-235ENST00000616973 RPS6KC1Q96S38 1066 aa16.91■□□□□ 0.3
NR1H3-235ENST00000616973 TARS2Q9BW92 718 aaKnown RBP16.91■□□□□ 0.3
NR1H3-235ENST00000616973 ZMYND15Q9H091 742 aa16.91■□□□□ 0.3
NR1H3-235ENST00000616973 CTTNBP2NLQ9P2B4 639 aa16.91■□□□□ 0.3
NR1H3-235ENST00000616973 ZSWIM8A7E2V4 1837 aa16.9■□□□□ 0.3
NR1H3-235ENST00000616973 RAD51CO43502 376 aa16.9■□□□□ 0.3
NR1H3-235ENST00000616973 HLA-DRAP01903 254 aa16.9■□□□□ 0.3
NR1H3-235ENST00000616973 TNNI1P19237 187 aa16.9■□□□□ 0.3
NR1H3-235ENST00000616973 ACOT2P49753 483 aa16.9■□□□□ 0.3
NR1H3-235ENST00000616973 SLC26A2P50443 739 aa16.9■□□□□ 0.3
NR1H3-235ENST00000616973 MRPS25P82663 173 aaKnown RBP16.9■□□□□ 0.3
NR1H3-235ENST00000616973 CDCA2Q69YH5 1023 aaPredicted RBP16.9■□□□□ 0.3
NR1H3-235ENST00000616973 SND1Q7KZF4 910 aaKnown RBP eCLIP16.9■□□□□ 0.3
NR1H3-235ENST00000616973 ZNF677Q86XU0 584 aa16.9■□□□□ 0.3
NR1H3-235ENST00000616973 CCDC102AQ96A19 550 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms