RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 P4HA2O15460 535 aa12.67□□□□□ -0.38
TARDBP-217ENST00000616545 EFCAB14O75071 495 aa12.67□□□□□ -0.38
TARDBP-217ENST00000616545 ADRB2P07550 413 aa12.67□□□□□ -0.38
TARDBP-217ENST00000616545 STAG3L1P0CL83 205 aa12.67□□□□□ -0.38
TARDBP-217ENST00000616545 RAG1P15918 1043 aa12.67□□□□□ -0.38
TARDBP-217ENST00000616545 CASP4P49662 377 aa12.67□□□□□ -0.38
TARDBP-217ENST00000616545 VAMP7P51809 220 aa12.67□□□□□ -0.38
TARDBP-217ENST00000616545 YARSP54577 528 aaKnown RBP12.67□□□□□ -0.38
TARDBP-217ENST00000616545 CLDN10P78369 228 aa12.67□□□□□ -0.38
TARDBP-217ENST00000616545 CYP24A1Q07973 514 aa12.67□□□□□ -0.38
TARDBP-217ENST00000616545 MBTPS1Q14703 1052 aa12.67□□□□□ -0.38
TARDBP-217ENST00000616545 KRT31Q15323 416 aa12.67□□□□□ -0.38
TARDBP-217ENST00000616545 COL13A1Q5TAT6 717 aaPredicted RBP12.67□□□□□ -0.38
TARDBP-217ENST00000616545 CRELD2Q6UXH1 353 aaPredicted RBP12.67□□□□□ -0.38
TARDBP-217ENST00000616545 MRPL10Q7Z7H8 261 aaKnown RBP12.67□□□□□ -0.38
TARDBP-217ENST00000616545 ZBTB33Q86T24 672 aa12.67□□□□□ -0.38
TARDBP-217ENST00000616545 PGBD4Q96DM1 585 aa12.67□□□□□ -0.38
TARDBP-217ENST00000616545 ACAP3Q96P50 834 aa12.67□□□□□ -0.38
TARDBP-217ENST00000616545 FNBP1Q96RU3 617 aa12.67□□□□□ -0.38
TARDBP-217ENST00000616545 HAPLN2Q9GZV7 340 aa12.67□□□□□ -0.38
TARDBP-217ENST00000616545 RPF1Q9H9Y2 349 aaKnown RBP12.67□□□□□ -0.38
TARDBP-217ENST00000616545 UBN1Q9NPG3 1134 aa12.67□□□□□ -0.38
TARDBP-217ENST00000616545 RGS18Q9NS28 235 aa12.67□□□□□ -0.38
TARDBP-217ENST00000616545 FAM105AQ9NUU6 356 aa12.67□□□□□ -0.38
TARDBP-217ENST00000616545 RBAKQ9NYW8 714 aaPredicted RBP12.67□□□□□ -0.38
TARDBP-217ENST00000616545 A0A0U1RQF3 1178 aa12.66□□□□□ -0.38
TARDBP-217ENST00000616545 A0A1B0GTH6 734 aa12.66□□□□□ -0.38
TARDBP-217ENST00000616545 GTPBP10A4D1E9 387 aaKnown RBP12.66□□□□□ -0.38
TARDBP-217ENST00000616545 NBNO60934 754 aa12.66□□□□□ -0.38
TARDBP-217ENST00000616545 NPTXRO95502 500 aa12.66□□□□□ -0.38
TARDBP-217ENST00000616545 EOMESO95936 686 aa12.66□□□□□ -0.38
TARDBP-217ENST00000616545 ATP1A3P13637 1013 aa12.66□□□□□ -0.38
TARDBP-217ENST00000616545 COPB1P53618 953 aaKnown RBP12.66□□□□□ -0.38
TARDBP-217ENST00000616545 UBASH3AP57075 661 aa12.66□□□□□ -0.38
TARDBP-217ENST00000616545 CETN1Q12798 172 aa12.66□□□□□ -0.38
TARDBP-217ENST00000616545 VWA3BQ502W6 1294 aa12.66□□□□□ -0.38
TARDBP-217ENST00000616545 UBXN11Q5T124 520 aa12.66□□□□□ -0.38
TARDBP-217ENST00000616545 FKBP15Q5T1M5 1219 aa12.66□□□□□ -0.38
TARDBP-217ENST00000616545 MFSD5Q6N075 450 aa12.66□□□□□ -0.38
TARDBP-217ENST00000616545 SLC24A5Q71RS6 500 aa12.66□□□□□ -0.38
TARDBP-217ENST00000616545 CBWD2Q8IUF1 395 aa12.66□□□□□ -0.38
TARDBP-217ENST00000616545 CREBRFQ8IUR6 639 aa12.66□□□□□ -0.38
TARDBP-217ENST00000616545 THNSL1Q8IYQ7 743 aa12.66□□□□□ -0.38
TARDBP-217ENST00000616545 PARD3BQ8TEW8 1205 aa12.66□□□□□ -0.38
TARDBP-217ENST00000616545 SAAL1Q96ER3 474 aa12.66□□□□□ -0.38
TARDBP-217ENST00000616545 WNT8AQ9H1J5 351 aa12.66□□□□□ -0.38
TARDBP-217ENST00000616545 TSPYL2Q9H2G4 693 aaPredicted RBP12.66□□□□□ -0.38
TARDBP-217ENST00000616545 ELAC1Q9H777 363 aaKnown RBP12.66□□□□□ -0.38
TARDBP-217ENST00000616545 USP20Q9Y2K6 914 aa12.66□□□□□ -0.38
TARDBP-217ENST00000616545 DERAQ9Y315 318 aa12.66□□□□□ -0.38
TARDBP-217ENST00000616545 GOLGA8IPA6NC78 632 aa12.65□□□□□ -0.38
TARDBP-217ENST00000616545 GOLGA8JA6NMD2 632 aa12.65□□□□□ -0.38
TARDBP-217ENST00000616545 LGALS16A8MUM7 142 aa12.65□□□□□ -0.38
TARDBP-217ENST00000616545 AFPP02771 609 aaKnown RBP12.65□□□□□ -0.38
TARDBP-217ENST00000616545 HARSP12081 509 aaKnown RBP12.65□□□□□ -0.38
TARDBP-217ENST00000616545 CYP2C18P33260 490 aa12.65□□□□□ -0.38
TARDBP-217ENST00000616545 ACOT2P49753 483 aa12.65□□□□□ -0.38
TARDBP-217ENST00000616545 FAM189BP81408 668 aa12.65□□□□□ -0.38
TARDBP-217ENST00000616545 CNKSR3Q6P9H4 555 aa12.65□□□□□ -0.38
TARDBP-217ENST00000616545 APTXQ7Z2E3 356 aaKnown RBP12.65□□□□□ -0.38
TARDBP-217ENST00000616545 WDR49Q8IV35 697 aa12.65□□□□□ -0.38
TARDBP-217ENST00000616545 RDH13Q8NBN7 331 aa12.65□□□□□ -0.38
TARDBP-217ENST00000616545 DBF4BQ8NFT6 615 aa12.65□□□□□ -0.38
TARDBP-217ENST00000616545 CACTINQ8WUQ7 758 aaKnown RBP12.65□□□□□ -0.38
TARDBP-217ENST00000616545 SLC35C1Q96A29 364 aa12.65□□□□□ -0.38
TARDBP-217ENST00000616545 IQCDQ96DY2 449 aa12.65□□□□□ -0.38
TARDBP-217ENST00000616545 EEF2KMTQ96G04 330 aa12.65□□□□□ -0.38
TARDBP-217ENST00000616545 MRFAP1L1Q96HT8 127 aa12.65□□□□□ -0.38
TARDBP-217ENST00000616545 ADAM2Q99965 735 aa12.65□□□□□ -0.38
TARDBP-217ENST00000616545 EIF2AQ9BY44 585 aaKnown RBP12.65□□□□□ -0.38
TARDBP-217ENST00000616545 PPP1R12CQ9BZL4 782 aa12.65□□□□□ -0.38
TARDBP-217ENST00000616545 TRIM5Q9C035 493 aa12.65□□□□□ -0.38
TARDBP-217ENST00000616545 TMX1Q9H3N1 280 aa12.65□□□□□ -0.38
TARDBP-217ENST00000616545 NDST4Q9H3R1 872 aa12.65□□□□□ -0.38
TARDBP-217ENST00000616545 RTN4Q9NQC3 1192 aaKnown RBP12.65□□□□□ -0.38
TARDBP-217ENST00000616545 GIT1Q9Y2X7 761 aa12.65□□□□□ -0.38
TARDBP-217ENST00000616545 IPPQ9Y573 584 aa12.65□□□□□ -0.38
TARDBP-217ENST00000616545 PCDHB2Q9Y5E7 798 aa12.65□□□□□ -0.38
TARDBP-217ENST00000616545 ABHD14A-ACY1A0A1B0GW23 586 aa12.64□□□□□ -0.39
TARDBP-217ENST00000616545 A0A1W2PQC6 194 aa12.64□□□□□ -0.39
TARDBP-217ENST00000616545 TTC26A0AVF1 554 aa12.64□□□□□ -0.39
TARDBP-217ENST00000616545 TRIM43BA6NCK2 446 aa12.64□□□□□ -0.39
TARDBP-217ENST00000616545 XPOTO43592 962 aaKnown RBP12.64□□□□□ -0.39
TARDBP-217ENST00000616545 ITGA4P13612 1032 aa12.64□□□□□ -0.39
TARDBP-217ENST00000616545 CCL23P55773 120 aa12.64□□□□□ -0.39
TARDBP-217ENST00000616545 PLCB2Q00722 1185 aa12.64□□□□□ -0.39
TARDBP-217ENST00000616545 KCNH2Q12809 1159 aa12.64□□□□□ -0.39
TARDBP-217ENST00000616545 PPIGQ13427 754 aaKnown RBP eCLIP12.64□□□□□ -0.396e-7■□□□□ 8.8
TARDBP-217ENST00000616545 IKBKEQ14164 716 aa12.64□□□□□ -0.39
TARDBP-217ENST00000616545 GPNMBQ14956 572 aa12.64□□□□□ -0.39
TARDBP-217ENST00000616545 NR1I3Q14994 352 aa12.64□□□□□ -0.39
TARDBP-217ENST00000616545 ENOX2Q16206 610 aaKnown RBP12.64□□□□□ -0.39
TARDBP-217ENST00000616545 HSP90AA4PQ58FG1 418 aa12.64□□□□□ -0.39
TARDBP-217ENST00000616545 XKR4Q5GH76 650 aa12.64□□□□□ -0.39
TARDBP-217ENST00000616545 TCERG1LQ5VWI1 586 aa12.64□□□□□ -0.39
TARDBP-217ENST00000616545 SMYD5Q6GMV2 418 aa12.64□□□□□ -0.39
TARDBP-217ENST00000616545 CDR2LQ86X02 465 aaPredicted RBP12.64□□□□□ -0.39
TARDBP-217ENST00000616545 TRIM43Q96BQ3 446 aaPredicted RBP12.64□□□□□ -0.39
TARDBP-217ENST00000616545 CGRRF1Q99675 332 aa12.64□□□□□ -0.39
TARDBP-217ENST00000616545 PRDM5Q9NQX1 630 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms