RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 KLK14Q9P0G3 267 aa20.95■□□□□ 0.94
CDX1-202ENST00000616154 ADAM28Q9UKQ2 775 aa20.95■□□□□ 0.94
CDX1-202ENST00000616154 NOL7Q9UMY1 257 aaKnown RBP20.95■□□□□ 0.94
CDX1-202ENST00000616154 DUSP12Q9UNI6 340 aa20.95■□□□□ 0.94
CDX1-202ENST00000616154 H0Y858 1186 aa20.94■□□□□ 0.94
CDX1-202ENST00000616154 ATP2B1P20020 1258 aa20.94■□□□□ 0.94
CDX1-202ENST00000616154 FXR2P51116 673 aaKnown RBP eCLIP20.94■□□□□ 0.94
CDX1-202ENST00000616154 ZNF174Q15697 407 aa20.94■□□□□ 0.94
CDX1-202ENST00000616154 MAEAQ7L5Y9 396 aa20.94■□□□□ 0.94
CDX1-202ENST00000616154 ZBTB8OSQ8IWT0 167 aa20.94■□□□□ 0.94
CDX1-202ENST00000616154 STAMQ92783 540 aa20.94■□□□□ 0.94
CDX1-202ENST00000616154 B3GALT6Q96L58 329 aa20.94■□□□□ 0.94
CDX1-202ENST00000616154 PLEKHA4Q9H4M7 779 aa20.94■□□□□ 0.94
CDX1-202ENST00000616154 FNIP2Q9P278 1114 aa20.94■□□□□ 0.94
CDX1-202ENST00000616154 IGSF9Q9P2J2 1179 aa20.94■□□□□ 0.94
CDX1-202ENST00000616154 PARP2Q9UGN5 583 aa20.94■□□□□ 0.94
CDX1-202ENST00000616154 CLUHO75153 1309 aa20.94■□□□□ 0.94
CDX1-202ENST00000616154 N4BP1O75113 896 aaKnown RBP20.93■□□□□ 0.94
CDX1-202ENST00000616154 RFPL2O75678 378 aa20.93■□□□□ 0.94
CDX1-202ENST00000616154 MUTP22033 750 aa20.93■□□□□ 0.94
CDX1-202ENST00000616154 CREMQ03060 361 aa20.93■□□□□ 0.94
CDX1-202ENST00000616154 CWF19L1Q69YN2 538 aaKnown RBP20.93■□□□□ 0.94
CDX1-202ENST00000616154 ERMNQ8TAM6 284 aa20.93■□□□□ 0.94
CDX1-202ENST00000616154 ZNF707Q96C28 371 aaPredicted RBP20.93■□□□□ 0.94
CDX1-202ENST00000616154 C2orf40Q9H1Z8 148 aa20.93■□□□□ 0.94
CDX1-202ENST00000616154 N4BP3O15049 544 aa20.92■□□□□ 0.94
CDX1-202ENST00000616154 TGM5O43548 720 aa20.92■□□□□ 0.94
CDX1-202ENST00000616154 GFRA3O60609 400 aa20.92■□□□□ 0.94
CDX1-202ENST00000616154 RPA1P27694 616 aa20.92■□□□□ 0.94
CDX1-202ENST00000616154 TUSC3Q13454 348 aa20.92■□□□□ 0.94
CDX1-202ENST00000616154 GNL2Q13823 731 aaKnown RBP20.92■□□□□ 0.94
CDX1-202ENST00000616154 HSP90AA2PQ14568 343 aaPredicted RBP20.92■□□□□ 0.94
CDX1-202ENST00000616154 POTEGQ6S5H5 508 aa20.92■□□□□ 0.94
CDX1-202ENST00000616154 PALB2Q86YC2 1186 aa20.92■□□□□ 0.94
CDX1-202ENST00000616154 RIN2Q8WYP3 895 aaPredicted RBP20.92■□□□□ 0.94
CDX1-202ENST00000616154 SMG7Q92540 1137 aaKnown RBP20.92■□□□□ 0.94
CDX1-202ENST00000616154 PDZD7Q9H5P4 517 aa20.92■□□□□ 0.94
CDX1-202ENST00000616154 ZDHHC7Q9NXF8 308 aa20.92■□□□□ 0.94
CDX1-202ENST00000616154 EPS15L1Q9UBC2 864 aa20.92■□□□□ 0.94
CDX1-202ENST00000616154 DMDP11532 3685 aa20.91■□□□□ 0.94
CDX1-202ENST00000616154 PROB1E7EW31 1015 aa20.91■□□□□ 0.94
CDX1-202ENST00000616154 LAD1O00515 517 aa20.91■□□□□ 0.94
CDX1-202ENST00000616154 TADA2AO75478 443 aa20.91■□□□□ 0.94
CDX1-202ENST00000616154 SPATA31D3P0C874 917 aa20.91■□□□□ 0.94
CDX1-202ENST00000616154 MYBP10242 640 aa20.91■□□□□ 0.94
CDX1-202ENST00000616154 CYP11B2P19099 503 aa20.91■□□□□ 0.94
CDX1-202ENST00000616154 GJB2P29033 226 aa20.91■□□□□ 0.94
CDX1-202ENST00000616154 GBP2P32456 591 aaPredicted RBP20.91■□□□□ 0.94
CDX1-202ENST00000616154 CUL4AQ13619 759 aa20.91■□□□□ 0.94
CDX1-202ENST00000616154 LILRA6Q6PI73 481 aa20.91■□□□□ 0.94
CDX1-202ENST00000616154 PADI6Q6TGC4 694 aa20.91■□□□□ 0.94
CDX1-202ENST00000616154 SPATA31D4Q6ZUB0 917 aa20.91■□□□□ 0.94
CDX1-202ENST00000616154 BSNDQ8WZ55 320 aa20.91■□□□□ 0.94
CDX1-202ENST00000616154 RABGGTAQ92696 567 aa20.91■□□□□ 0.94
CDX1-202ENST00000616154 CCDC113Q9H0I3 377 aa20.91■□□□□ 0.94
CDX1-202ENST00000616154 NT5C3AQ9H0P0 336 aa20.91■□□□□ 0.94
CDX1-202ENST00000616154 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.91■□□□□ 0.94
CDX1-202ENST00000616154 SF3B1O75533 1304 aaKnown RBP eCLIP20.91■□□□□ 0.94
CDX1-202ENST00000616154 VWA8A3KMH1 1905 aa20.9■□□□□ 0.94
CDX1-202ENST00000616154 TRIP11Q15643 1979 aa20.9■□□□□ 0.94
CDX1-202ENST00000616154 ARHGEF35A5YM69 484 aa20.9■□□□□ 0.94
CDX1-202ENST00000616154 TTLL13PA6NNM8 815 aa20.9■□□□□ 0.94
CDX1-202ENST00000616154 PTGESO14684 152 aa20.9■□□□□ 0.94
CDX1-202ENST00000616154 NPR3P17342 541 aa20.9■□□□□ 0.94
CDX1-202ENST00000616154 PRPHP41219 470 aa20.9■□□□□ 0.94
CDX1-202ENST00000616154 NAMPTP43490 491 aa20.9■□□□□ 0.94
CDX1-202ENST00000616154 PRPF4BQ13523 1007 aaKnown RBP20.9■□□□□ 0.94
CDX1-202ENST00000616154 PDIA5Q14554 519 aa20.9■□□□□ 0.94
CDX1-202ENST00000616154 NBR1Q14596 966 aa20.9■□□□□ 0.94
CDX1-202ENST00000616154 MAPK6Q16659 721 aa20.9■□□□□ 0.94
CDX1-202ENST00000616154 IGSF22Q8N9C0 903 aa20.9■□□□□ 0.94
CDX1-202ENST00000616154 FLCNQ8NFG4 579 aa20.9■□□□□ 0.94
CDX1-202ENST00000616154 MYADMQ96S97 322 aa20.9■□□□□ 0.94
CDX1-202ENST00000616154 PAAF1Q9BRP4 392 aa20.9■□□□□ 0.94
CDX1-202ENST00000616154 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.9■□□□□ 0.94
CDX1-202ENST00000616154 SNTG2Q9NY99 539 aa20.9■□□□□ 0.94
CDX1-202ENST00000616154 CACNG4Q9UBN1 327 aa20.9■□□□□ 0.94
CDX1-202ENST00000616154 PCDHB6Q9Y5E3 794 aa20.9■□□□□ 0.94
CDX1-202ENST00000616154 DOCK6Q96HP0 2047 aa20.9■□□□□ 0.94
CDX1-202ENST00000616154 RIF1Q5UIP0 2472 aaKnown RBP20.89■□□□□ 0.94
CDX1-202ENST00000616154 ACKR2O00590 384 aa20.89■□□□□ 0.93
CDX1-202ENST00000616154 RECQL4O94761 1208 aa20.89■□□□□ 0.93
CDX1-202ENST00000616154 PRKCBP05771 671 aa20.89■□□□□ 0.93
CDX1-202ENST00000616154 RPL17P18621 184 aaKnown RBP20.89■□□□□ 0.93
CDX1-202ENST00000616154 AOC1P19801 751 aa20.89■□□□□ 0.93
CDX1-202ENST00000616154 RILPL1Q5EBL4 403 aa20.89■□□□□ 0.93
CDX1-202ENST00000616154 RTP2Q5QGT7 225 aa20.89■□□□□ 0.93
CDX1-202ENST00000616154 HAUS3Q68CZ6 603 aa20.89■□□□□ 0.93
CDX1-202ENST00000616154 GLYCTKQ8IVS8 523 aa20.89■□□□□ 0.93
CDX1-202ENST00000616154 NXPE3Q969Y0 559 aa20.89■□□□□ 0.93
CDX1-202ENST00000616154 PRKD2Q9BZL6 878 aa20.89■□□□□ 0.93
CDX1-202ENST00000616154 PIDD1Q9HB75 910 aa20.89■□□□□ 0.93
CDX1-202ENST00000616154 DAXXQ9UER7 740 aaPredicted RBP20.89■□□□□ 0.93
CDX1-202ENST00000616154 FBXL21Q9UKT6 434 aa20.89■□□□□ 0.93
CDX1-202ENST00000616154 CFAP54Q96N23 3096 aa20.88■□□□□ 0.93
CDX1-202ENST00000616154 CASTOR2A6NHX0 329 aa20.88■□□□□ 0.93
CDX1-202ENST00000616154 NARSO43776 548 aaKnown RBP20.88■□□□□ 0.93
CDX1-202ENST00000616154 KIF4AO95239 1232 aa20.88■□□□□ 0.93
CDX1-202ENST00000616154 NBL1P41271 181 aa20.88■□□□□ 0.93
CDX1-202ENST00000616154 PTGDRQ13258 359 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms