RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 UBN1Q9NPG3 1134 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 CACNA1SQ13698 1873 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 CFAP69A5D8W1 941 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 CA4P22748 312 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 TPP2P29144 1249 aaPredicted RBP14.06□□□□□ -0.16
MSH6-214ENST00000616033 MDH1BQ5I0G3 518 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 RFWD3Q6PCD5 774 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 GBP7Q8N8V2 638 aaPredicted RBP14.06□□□□□ -0.16
MSH6-214ENST00000616033 TBC1D10AQ9BXI6 508 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 STK33Q9BYT3 514 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 DNAJC18Q9H819 358 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 VPS37BQ9H9H4 285 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 METTL14Q9HCE5 456 aaKnown RBP14.06□□□□□ -0.16
MSH6-214ENST00000616033 KCNMB3Q9NPA1 279 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 PARP2Q9UGN5 583 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 CORO1CQ9ULV4 474 aaPredicted RBP14.06□□□□□ -0.16
MSH6-214ENST00000616033 PNMA6FA0A0J9YX94 578 aa14.05□□□□□ -0.16
MSH6-214ENST00000616033 UNC5CO95185 931 aa14.05□□□□□ -0.16
MSH6-214ENST00000616033 LUC7L3O95232 432 aaKnown RBP14.05□□□□□ -0.16
MSH6-214ENST00000616033 ZBTB16Q05516 673 aa14.05□□□□□ -0.16
MSH6-214ENST00000616033 LRRC23Q53EV4 343 aaPredicted RBP14.05□□□□□ -0.16
MSH6-214ENST00000616033 ODR4Q5SWX8 454 aa14.05□□□□□ -0.16
MSH6-214ENST00000616033 SLC13A5Q86YT5 568 aaPredicted RBP14.05□□□□□ -0.16
MSH6-214ENST00000616033 ARHGEF19Q8IW93 802 aa14.05□□□□□ -0.16
MSH6-214ENST00000616033 ERMNQ8TAM6 284 aa14.05□□□□□ -0.16
MSH6-214ENST00000616033 CKAP2Q8WWK9 683 aa14.05□□□□□ -0.16
MSH6-214ENST00000616033 SEC14L1Q92503 715 aa14.05□□□□□ -0.16
MSH6-214ENST00000616033 SLC5A5Q92911 643 aa14.05□□□□□ -0.16
MSH6-214ENST00000616033 PHTF1Q9UMS5 762 aa14.05□□□□□ -0.16
MSH6-214ENST00000616033 BTNL10A8MVZ5 291 aa14.05□□□□□ -0.16
MSH6-214ENST00000616033 LDHCP07864 332 aa14.05□□□□□ -0.16
MSH6-214ENST00000616033 TMEM62Q0P6H9 643 aa14.05□□□□□ -0.16
MSH6-214ENST00000616033 ARHGEF18Q6ZSZ5 1173 aa14.05□□□□□ -0.16
MSH6-214ENST00000616033 FAM178BQ8IXR5 827 aa14.05□□□□□ -0.16
MSH6-214ENST00000616033 DNAJC9Q8WXX5 260 aa14.05□□□□□ -0.16
MSH6-214ENST00000616033 RUNDC3BQ96NL0 473 aa14.05□□□□□ -0.16
MSH6-214ENST00000616033 CYTH2Q99418 400 aa14.05□□□□□ -0.16
MSH6-214ENST00000616033 EMSYQ7Z589 1322 aa14.05□□□□□ -0.16
MSH6-214ENST00000616033 PDXKO00764 312 aa14.05□□□□□ -0.16
MSH6-214ENST00000616033 TGFB1I1O43294 461 aa14.05□□□□□ -0.16
MSH6-214ENST00000616033 ATF2P15336 505 aa14.05□□□□□ -0.16
MSH6-214ENST00000616033 JAM2P57087 298 aa14.05□□□□□ -0.16
MSH6-214ENST00000616033 TSNAXIP1Q2TAA8 658 aa14.05□□□□□ -0.16
MSH6-214ENST00000616033 TAF1BQ53T94 588 aaPredicted RBP14.05□□□□□ -0.16
MSH6-214ENST00000616033 FAM196AQ6ZSG2 479 aa14.05□□□□□ -0.16
MSH6-214ENST00000616033 ARMCX6Q7L4S7 300 aa14.05□□□□□ -0.16
MSH6-214ENST00000616033 ZSWIM2Q8NEG5 633 aa14.05□□□□□ -0.16
MSH6-214ENST00000616033 WDR66Q8TBY9 1149 aa14.05□□□□□ -0.16
MSH6-214ENST00000616033 ZNF564Q8TBZ8 553 aaPredicted RBP14.05□□□□□ -0.16
MSH6-214ENST00000616033 RIOX1Q9H6W3 641 aa14.05□□□□□ -0.16
MSH6-214ENST00000616033 MTMR4Q9NYA4 1195 aa14.05□□□□□ -0.16
MSH6-214ENST00000616033 LNPEPQ9UIQ6 1025 aa14.05□□□□□ -0.16
MSH6-214ENST00000616033 EXOC1LA0A1B0GW35 172 aa14.04□□□□□ -0.16
MSH6-214ENST00000616033 C2orf71A6NGG8 1288 aa14.04□□□□□ -0.16
MSH6-214ENST00000616033 C6orf229H3BNL8 230 aa14.04□□□□□ -0.16
MSH6-214ENST00000616033 GPC5P78333 572 aa14.04□□□□□ -0.16
MSH6-214ENST00000616033 IL9RQ01113 521 aa14.04□□□□□ -0.16
MSH6-214ENST00000616033 SEPT2Q15019 361 aa14.04□□□□□ -0.16
MSH6-214ENST00000616033 QRICH1Q2TAL8 776 aa14.04□□□□□ -0.16
MSH6-214ENST00000616033 SYCP2LQ5T4T6 812 aa14.04□□□□□ -0.16
MSH6-214ENST00000616033 DPY19L2P1Q6NXN4 242 aa14.04□□□□□ -0.16
MSH6-214ENST00000616033 PPP4R3CPQ6ZMV5 832 aa14.04□□□□□ -0.16
MSH6-214ENST00000616033 ZNF365Q70YC5 407 aa14.04□□□□□ -0.16
MSH6-214ENST00000616033 KLHL23Q8NBE8 558 aa14.04□□□□□ -0.16
MSH6-214ENST00000616033 RNPEPL1Q9HAU8 725 aa14.04□□□□□ -0.16
MSH6-214ENST00000616033 TXLNGQ9NUQ3 528 aa14.04□□□□□ -0.16
MSH6-214ENST00000616033 APEX2Q9UBZ4 518 aa14.04□□□□□ -0.16
MSH6-214ENST00000616033 CHKBQ9Y259 395 aa14.04□□□□□ -0.16
MSH6-214ENST00000616033 IFNB1P01574 187 aa14.04□□□□□ -0.16
MSH6-214ENST00000616033 KRT5P13647 590 aa14.04□□□□□ -0.16
MSH6-214ENST00000616033 CALB2P22676 271 aa14.04□□□□□ -0.16
MSH6-214ENST00000616033 GALNTL6Q49A17 601 aa14.04□□□□□ -0.16
MSH6-214ENST00000616033 PPP1R15BQ5SWA1 713 aa14.04□□□□□ -0.16
MSH6-214ENST00000616033 SLC47A2Q86VL8 602 aa14.04□□□□□ -0.16
MSH6-214ENST00000616033 ANKLE1Q8NAG6 615 aa14.04□□□□□ -0.16
MSH6-214ENST00000616033 A0A0A6YYK5 440 aaPredicted RBP14.03□□□□□ -0.16
MSH6-214ENST00000616033 TTC36A6NLP5 189 aa14.03□□□□□ -0.16
MSH6-214ENST00000616033 EML1O00423 815 aa14.03□□□□□ -0.16
MSH6-214ENST00000616033 UFL1O94874 794 aa14.03□□□□□ -0.16
MSH6-214ENST00000616033 TAC1P20366 129 aa14.03□□□□□ -0.16
MSH6-214ENST00000616033 ARHGAP4P98171 946 aa14.03□□□□□ -0.16
MSH6-214ENST00000616033 KLC1Q07866 573 aa14.03□□□□□ -0.16
MSH6-214ENST00000616033 STRN3Q13033 797 aa14.03□□□□□ -0.16
MSH6-214ENST00000616033 LRRC36Q1X8D7 754 aa14.03□□□□□ -0.16
MSH6-214ENST00000616033 MTDHQ86UE4 582 aaKnown RBP14.03□□□□□ -0.16
MSH6-214ENST00000616033 LRRC8CQ8TDW0 803 aa14.03□□□□□ -0.16
MSH6-214ENST00000616033 ARHGEF1Q92888 912 aaKnown RBP14.03□□□□□ -0.16
MSH6-214ENST00000616033 DENND2DQ9H6A0 471 aaPredicted RBP14.03□□□□□ -0.16
MSH6-214ENST00000616033 PEX11AO75192 247 aa14.03□□□□□ -0.16
MSH6-214ENST00000616033 BANF1O75531 89 aa14.03□□□□□ -0.16
MSH6-214ENST00000616033 MARSP56192 900 aaKnown RBP14.03□□□□□ -0.16
MSH6-214ENST00000616033 GSTO1P78417 241 aa14.03□□□□□ -0.16
MSH6-214ENST00000616033 RCN1Q15293 331 aa14.03□□□□□ -0.16
MSH6-214ENST00000616033 C16orf86Q6ZW13 317 aa14.03□□□□□ -0.16
MSH6-214ENST00000616033 SAYSD1Q9NPB0 183 aa14.03□□□□□ -0.16
MSH6-214ENST00000616033 TRAF3IP3Q9Y228 551 aa14.03□□□□□ -0.16
MSH6-214ENST00000616033 TOGARAM1Q9Y4F4 1720 aa14.03□□□□□ -0.16
MSH6-214ENST00000616033 PITPNM2Q9BZ72 1349 aa14.03□□□□□ -0.16
MSH6-214ENST00000616033 ALDH3A1P30838 453 aa14.03□□□□□ -0.16
MSH6-214ENST00000616033 HSPA1LP34931 641 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms