RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 RBM23Q86U06 439 aaKnown RBP18.33■□□□□ 0.53
CBWD3-211ENST00000615061 KCNN1Q92952 543 aa18.33■□□□□ 0.53
CBWD3-211ENST00000615061 BICD1Q96G01 975 aa18.33■□□□□ 0.53
CBWD3-211ENST00000615061 RPS6KC1Q96S38 1066 aa18.33■□□□□ 0.53
CBWD3-211ENST00000615061 VN1R3Q9BXE9 311 aa18.33■□□□□ 0.53
CBWD3-211ENST00000615061 FGFBP2Q9BYJ0 223 aa18.33■□□□□ 0.53
CBWD3-211ENST00000615061 FAM13BQ9NYF5 915 aa18.33■□□□□ 0.53
CBWD3-211ENST00000615061 BDP1A6H8Y1 2624 aa18.33■□□□□ 0.52
CBWD3-211ENST00000615061 A0A1B0GVL5 298 aa18.32■□□□□ 0.52
CBWD3-211ENST00000615061 H0YCG3 227 aa18.32■□□□□ 0.52
CBWD3-211ENST00000615061 OR1G1P47890 313 aa18.32■□□□□ 0.52
CBWD3-211ENST00000615061 NUCB2P80303 420 aa18.32■□□□□ 0.52
CBWD3-211ENST00000615061 GTF2BQ00403 316 aa18.32■□□□□ 0.52
CBWD3-211ENST00000615061 KRT17Q04695 432 aa18.32■□□□□ 0.52
CBWD3-211ENST00000615061 HYAL1Q12794 435 aa18.32■□□□□ 0.52
CBWD3-211ENST00000615061 GLRA4Q5JXX5 417 aa18.32■□□□□ 0.52
CBWD3-211ENST00000615061 ZPBP2Q6X784 338 aa18.32■□□□□ 0.52
CBWD3-211ENST00000615061 TCF25Q9BQ70 676 aa18.32■□□□□ 0.52
CBWD3-211ENST00000615061 TNMDQ9H2S6 317 aa18.32■□□□□ 0.52
CBWD3-211ENST00000615061 IGFLR1Q9H665 355 aa18.32■□□□□ 0.52
CBWD3-211ENST00000615061 MARCH5Q9NX47 278 aa18.32■□□□□ 0.52
CBWD3-211ENST00000615061 PUF60Q9UHX1 559 aaKnown RBP18.32■□□□□ 0.52
CBWD3-211ENST00000615061 KCNH3Q9ULD8 1083 aa18.32■□□□□ 0.52
CBWD3-211ENST00000615061 LZTS1Q9Y250 596 aa18.32■□□□□ 0.52
CBWD3-211ENST00000615061 FRMD3A2A2Y4 597 aa18.32■□□□□ 0.52
CBWD3-211ENST00000615061 TISP43B9A030 160 aa18.32■□□□□ 0.52
CBWD3-211ENST00000615061 FSCN2O14926 492 aa18.32■□□□□ 0.52
CBWD3-211ENST00000615061 HNRNPDLO14979 420 aaKnown RBP18.32■□□□□ 0.52
CBWD3-211ENST00000615061 MEFVO15553 781 aaPredicted RBP18.32■□□□□ 0.52
CBWD3-211ENST00000615061 ALDH2P05091 517 aa18.32■□□□□ 0.52
CBWD3-211ENST00000615061 MCF2P10911 925 aa18.32■□□□□ 0.52
CBWD3-211ENST00000615061 CASP5P51878 434 aa18.32■□□□□ 0.52
CBWD3-211ENST00000615061 KCNA1Q09470 495 aa18.32■□□□□ 0.52
CBWD3-211ENST00000615061 GRIK3Q13003 919 aa18.32■□□□□ 0.52
CBWD3-211ENST00000615061 ADALQ6DHV7 355 aa18.32■□□□□ 0.52
CBWD3-211ENST00000615061 SLC39A4Q6P5W5 647 aa18.32■□□□□ 0.52
CBWD3-211ENST00000615061 ZNF720Q7Z2F6 126 aa18.32■□□□□ 0.52
CBWD3-211ENST00000615061 HLA-CQ95604 372 aa18.32■□□□□ 0.52
CBWD3-211ENST00000615061 PAAF1Q9BRP4 392 aa18.32■□□□□ 0.52
CBWD3-211ENST00000615061 TMEM175Q9BSA9 504 aa18.32■□□□□ 0.52
CBWD3-211ENST00000615061 TRIM9Q9C026 710 aa18.32■□□□□ 0.52
CBWD3-211ENST00000615061 MRPL44Q9H9J2 332 aaKnown RBP18.32■□□□□ 0.52
CBWD3-211ENST00000615061 ENTPD7Q9NQZ7 604 aa18.32■□□□□ 0.52
CBWD3-211ENST00000615061 FAN1Q9Y2M0 1017 aa18.32■□□□□ 0.52
CBWD3-211ENST00000615061 HIDE1A8MVS5 230 aa18.31■□□□□ 0.52
CBWD3-211ENST00000615061 PER2O15055 1255 aa18.31■□□□□ 0.52
CBWD3-211ENST00000615061 PFKFB1P16118 471 aa18.31■□□□□ 0.52
CBWD3-211ENST00000615061 GRM5P41594 1212 aa18.31■□□□□ 0.52
CBWD3-211ENST00000615061 LIG4P49917 911 aa18.31■□□□□ 0.52
CBWD3-211ENST00000615061 NOLC1Q14978 699 aaKnown RBP eCLIP18.31■□□□□ 0.52
CBWD3-211ENST00000615061 NAB2Q15742 525 aa18.31■□□□□ 0.52
CBWD3-211ENST00000615061 HERC4Q5GLZ8 1057 aaPredicted RBP18.31■□□□□ 0.52
CBWD3-211ENST00000615061 EP400NLQ6ZTU2 488 aa18.31■□□□□ 0.52
CBWD3-211ENST00000615061 TMC7Q7Z402 723 aa18.31■□□□□ 0.52
CBWD3-211ENST00000615061 MAP4K3Q8IVH8 894 aa18.31■□□□□ 0.52
CBWD3-211ENST00000615061 GRAMD1CQ8IYS0 662 aa18.31■□□□□ 0.52
CBWD3-211ENST00000615061 AUTS2Q8WXX7 1259 aa18.31■□□□□ 0.52
CBWD3-211ENST00000615061 HPS3Q969F9 1004 aa18.31■□□□□ 0.52
CBWD3-211ENST00000615061 SCAND2PQ9GZW5 306 aaPredicted RBP18.31■□□□□ 0.52
CBWD3-211ENST00000615061 CUEDC2Q9H467 287 aa18.31■□□□□ 0.52
CBWD3-211ENST00000615061 PANK4Q9NVE7 773 aa18.31■□□□□ 0.52
CBWD3-211ENST00000615061 ZMYM2Q9UBW7 1377 aa18.3■□□□□ 0.52
CBWD3-211ENST00000615061 LINC01565O15544 149 aa18.3■□□□□ 0.52
CBWD3-211ENST00000615061 CLDN3O15551 220 aa18.3■□□□□ 0.52
CBWD3-211ENST00000615061 PPP1R37O75864 691 aa18.3■□□□□ 0.52
CBWD3-211ENST00000615061 GAP43P17677 238 aa18.3■□□□□ 0.52
CBWD3-211ENST00000615061 CMA1P23946 247 aa18.3■□□□□ 0.52
CBWD3-211ENST00000615061 MATR3P43243 847 aaKnown RBP eCLIP18.3■□□□□ 0.52
CBWD3-211ENST00000615061 NRIP1P48552 1158 aa18.3■□□□□ 0.52
CBWD3-211ENST00000615061 MCL1Q07820 350 aa18.3■□□□□ 0.52
CBWD3-211ENST00000615061 APBB1IPQ7Z5R6 666 aaPredicted RBP18.3■□□□□ 0.52
CBWD3-211ENST00000615061 VPS52Q8N1B4 723 aa18.3■□□□□ 0.52
CBWD3-211ENST00000615061 CCDC94Q9BW85 323 aaPredicted RBP18.3■□□□□ 0.52
CBWD3-211ENST00000615061 BLZF1Q9H2G9 400 aa18.3■□□□□ 0.52
CBWD3-211ENST00000615061 ST6GALNAC4Q9H4F1 302 aa18.3■□□□□ 0.52
CBWD3-211ENST00000615061 UBE2ZQ9H832 354 aaPredicted RBP18.3■□□□□ 0.52
CBWD3-211ENST00000615061 SERTAD1Q9UHV2 236 aa18.3■□□□□ 0.52
CBWD3-211ENST00000615061 PDCD11Q14690 1871 aaKnown RBP18.3■□□□□ 0.52
CBWD3-211ENST00000615061 CASTOR2A6NHX0 329 aa18.3■□□□□ 0.52
CBWD3-211ENST00000615061 ANKRD63C9JTQ0 380 aa18.3■□□□□ 0.52
CBWD3-211ENST00000615061 PIGRP01833 764 aa18.3■□□□□ 0.52
CBWD3-211ENST00000615061 THP07101 528 aa18.3■□□□□ 0.52
CBWD3-211ENST00000615061 MYBP10242 640 aa18.3■□□□□ 0.52
CBWD3-211ENST00000615061 KCNA5P22460 613 aa18.3■□□□□ 0.52
CBWD3-211ENST00000615061 AFMP43652 599 aa18.3■□□□□ 0.52
CBWD3-211ENST00000615061 RBM10P98175 930 aaKnown RBP18.3■□□□□ 0.52
CBWD3-211ENST00000615061 COASYQ13057 564 aa18.3■□□□□ 0.52
CBWD3-211ENST00000615061 ZBTB41Q5SVQ8 909 aa18.3■□□□□ 0.52
CBWD3-211ENST00000615061 GLIS3Q8NEA6 775 aa18.3■□□□□ 0.52
CBWD3-211ENST00000615061 STRA6Q9BX79 667 aa18.3■□□□□ 0.52
CBWD3-211ENST00000615061 CLDND1Q9NY35 253 aa18.3■□□□□ 0.52
CBWD3-211ENST00000615061 SEL1LQ9UBV2 794 aa18.3■□□□□ 0.52
CBWD3-211ENST00000615061 COG5Q9UP83 839 aa18.3■□□□□ 0.52
CBWD3-211ENST00000615061 HPSEQ9Y251 543 aa18.3■□□□□ 0.52
CBWD3-211ENST00000615061 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.29■□□□□ 0.52
CBWD3-211ENST00000615061 GCNT3O95395 438 aa18.29■□□□□ 0.52
CBWD3-211ENST00000615061 TNFSF9P41273 254 aa18.29■□□□□ 0.52
CBWD3-211ENST00000615061 KCNQ1P51787 676 aa18.29■□□□□ 0.52
CBWD3-211ENST00000615061 ASIC1P78348 528 aa18.29■□□□□ 0.52
CBWD3-211ENST00000615061 DLX2Q07687 328 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms