RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 MMP14P50281 582 aa12.55□□□□□ -0.4
CDH5-208ENST00000614547 BFSP1Q12934 665 aa12.55□□□□□ -0.4
CDH5-208ENST00000614547 P3H1Q32P28 736 aa12.55□□□□□ -0.4
CDH5-208ENST00000614547 TAF1BQ53T94 588 aaPredicted RBP12.55□□□□□ -0.4
CDH5-208ENST00000614547 MTDHQ86UE4 582 aaKnown RBP12.55□□□□□ -0.4
CDH5-208ENST00000614547 SNF8Q96H20 258 aa12.55□□□□□ -0.4
CDH5-208ENST00000614547 PI4K2AQ9BTU6 479 aa12.55□□□□□ -0.4
CDH5-208ENST00000614547 RXFP1Q9HBX9 757 aa12.55□□□□□ -0.4
CDH5-208ENST00000614547 DPPA5A6NC42 116 aa12.54□□□□□ -0.4
CDH5-208ENST00000614547 FAM47DPA6NHR8 397 aa12.54□□□□□ -0.4
CDH5-208ENST00000614547 MAP3K7O43318 606 aa12.54□□□□□ -0.4
CDH5-208ENST00000614547 BMP3P12645 472 aa12.54□□□□□ -0.4
CDH5-208ENST00000614547 ATP4AP20648 1035 aa12.54□□□□□ -0.4
CDH5-208ENST00000614547 NSFP46459 744 aaKnown RBP12.54□□□□□ -0.4
CDH5-208ENST00000614547 KDSRQ06136 332 aa12.54□□□□□ -0.4
CDH5-208ENST00000614547 GPS1Q13098 491 aa12.54□□□□□ -0.4
CDH5-208ENST00000614547 LLGL2Q6P1M3 1020 aa12.54□□□□□ -0.4
CDH5-208ENST00000614547 ATXN2LQ8WWM7 1075 aaKnown RBP12.54□□□□□ -0.4
CDH5-208ENST00000614547 DHX38Q92620 1227 aaKnown RBP12.54□□□□□ -0.4
CDH5-208ENST00000614547 HES6Q96HZ4 224 aa12.54□□□□□ -0.4
CDH5-208ENST00000614547 ZNF317Q96PQ6 595 aaPredicted RBP12.54□□□□□ -0.4
CDH5-208ENST00000614547 NAP1L4Q99733 375 aaKnown RBP12.54□□□□□ -0.4
CDH5-208ENST00000614547 AMNQ9BXJ7 453 aa12.54□□□□□ -0.4
CDH5-208ENST00000614547 KIAA1683Q9H0B3 1180 aa12.54□□□□□ -0.4
CDH5-208ENST00000614547 TMEM117Q9H0C3 514 aa12.54□□□□□ -0.4
CDH5-208ENST00000614547 C12orf65Q9H3J6 166 aaKnown RBP12.54□□□□□ -0.4
CDH5-208ENST00000614547 PPARGC1AQ9UBK2 798 aaKnown RBP12.54□□□□□ -0.4
CDH5-208ENST00000614547 ZMYND8Q9ULU4 1186 aaPredicted RBP12.54□□□□□ -0.4
CDH5-208ENST00000614547 HAUS5O94927 633 aa12.54□□□□□ -0.4
CDH5-208ENST00000614547 SNUPNO95149 360 aaKnown RBP12.54□□□□□ -0.4
CDH5-208ENST00000614547 SERPINB2P05120 415 aa12.54□□□□□ -0.4
CDH5-208ENST00000614547 MYCLP12524 364 aaPredicted RBP12.54□□□□□ -0.4
CDH5-208ENST00000614547 PAPOLAP51003 745 aaKnown RBP12.54□□□□□ -0.4
CDH5-208ENST00000614547 ZNF394Q53GI3 561 aa12.54□□□□□ -0.4
CDH5-208ENST00000614547 GRK7Q8WTQ7 553 aa12.54□□□□□ -0.4
CDH5-208ENST00000614547 TLCD1Q96CP7 247 aa12.54□□□□□ -0.4
CDH5-208ENST00000614547 CCDC124Q96CT7 223 aaKnown RBP12.54□□□□□ -0.4
CDH5-208ENST00000614547 SYNCQ9H7C4 482 aa12.54□□□□□ -0.4
CDH5-208ENST00000614547 DBNDD1Q9H9R9 158 aa12.54□□□□□ -0.4
CDH5-208ENST00000614547 COG5Q9UP83 839 aa12.54□□□□□ -0.4
CDH5-208ENST00000614547 CAPN9O14815 690 aa12.54□□□□□ -0.4
CDH5-208ENST00000614547 CDH16O75309 829 aa12.54□□□□□ -0.4
CDH5-208ENST00000614547 DCTN3O75935 186 aa12.54□□□□□ -0.4
CDH5-208ENST00000614547 YWHAGP61981 247 aaKnown RBP eCLIP12.54□□□□□ -0.4
CDH5-208ENST00000614547 ICA1Q05084 483 aa12.54□□□□□ -0.4
CDH5-208ENST00000614547 ZNF543Q08ER8 600 aa12.54□□□□□ -0.4
CDH5-208ENST00000614547 CLUL1Q15846 466 aa12.54□□□□□ -0.4
CDH5-208ENST00000614547 TMEM119Q4V9L6 283 aa12.54□□□□□ -0.4
CDH5-208ENST00000614547 RNF220Q5VTB9 566 aa12.54□□□□□ -0.4
CDH5-208ENST00000614547 SYT2Q8N9I0 419 aaPredicted RBP12.54□□□□□ -0.4
CDH5-208ENST00000614547 ABTB1Q969K4 478 aaPredicted RBP12.54□□□□□ -0.4
CDH5-208ENST00000614547 TCHPQ9BT92 498 aa12.54□□□□□ -0.4
CDH5-208ENST00000614547 KCTD10Q9H3F6 313 aa12.54□□□□□ -0.4
CDH5-208ENST00000614547 NKX1-2Q9UD57 310 aaPredicted RBP12.54□□□□□ -0.4
CDH5-208ENST00000614547 PEX3P56589 373 aa12.53□□□□□ -0.4
CDH5-208ENST00000614547 KLRC3Q07444 240 aa12.53□□□□□ -0.4
CDH5-208ENST00000614547 PDIA2Q13087 525 aaKnown RBP12.53□□□□□ -0.4
CDH5-208ENST00000614547 ARSHQ5FYA8 562 aa12.53□□□□□ -0.4
CDH5-208ENST00000614547 DCAF12L1Q5VU92 463 aa12.53□□□□□ -0.4
CDH5-208ENST00000614547 MIGA2Q7L4E1 593 aa12.53□□□□□ -0.4
CDH5-208ENST00000614547 MKNK1Q9BUB5 465 aa12.53□□□□□ -0.4
CDH5-208ENST00000614547 SHCBP1LQ9BZQ2 653 aa12.53□□□□□ -0.4
CDH5-208ENST00000614547 KCNQ5Q9NR82 932 aa12.53□□□□□ -0.4
CDH5-208ENST00000614547 LARSQ9P2J5 1176 aaKnown RBP12.53□□□□□ -0.4
CDH5-208ENST00000614547 SPDYE5A6NIY4 337 aa12.53□□□□□ -0.4
CDH5-208ENST00000614547 RALAP11233 206 aa12.53□□□□□ -0.4
CDH5-208ENST00000614547 KRT10P13645 584 aa12.53□□□□□ -0.4
CDH5-208ENST00000614547 EPHB1P54762 984 aa12.53□□□□□ -0.4
CDH5-208ENST00000614547 CERKLQ49MI3 558 aaPredicted RBP12.53□□□□□ -0.4
CDH5-208ENST00000614547 GPATCH4Q5T3I0 446 aaKnown RBP12.53□□□□□ -0.4
CDH5-208ENST00000614547 LVRNQ6Q4G3 990 aa12.53□□□□□ -0.4
CDH5-208ENST00000614547 TRMT10CQ7L0Y3 403 aaKnown RBP12.53□□□□□ -0.4
CDH5-208ENST00000614547 SLC47A2Q86VL8 602 aa12.53□□□□□ -0.4
CDH5-208ENST00000614547 CCDC89Q8N998 374 aa12.53□□□□□ -0.4
CDH5-208ENST00000614547 FNBP1Q96RU3 617 aa12.53□□□□□ -0.4
CDH5-208ENST00000614547 DIS3Q9Y2L1 958 aaKnown RBP12.53□□□□□ -0.4
CDH5-208ENST00000614547 C2CD2Q9Y426 696 aa12.53□□□□□ -0.4
CDH5-208ENST00000614547 SLC4A7Q9Y6M7 1214 aa12.53□□□□□ -0.4
CDH5-208ENST00000614547 C5orf60A6NFR6 353 aa12.53□□□□□ -0.4
CDH5-208ENST00000614547 SLC16A4O15374 487 aa12.53□□□□□ -0.4
CDH5-208ENST00000614547 VAMP7P51809 220 aa12.53□□□□□ -0.4
CDH5-208ENST00000614547 RRP1BQ14684 758 aaKnown RBP12.53□□□□□ -0.4
CDH5-208ENST00000614547 LRRC23Q53EV4 343 aaPredicted RBP12.53□□□□□ -0.4
CDH5-208ENST00000614547 PHLDB3Q6NSJ2 640 aa12.53□□□□□ -0.4
CDH5-208ENST00000614547 ARHGEF19Q8IW93 802 aa12.53□□□□□ -0.4
CDH5-208ENST00000614547 SLC25A41Q8N5S1 370 aa12.53□□□□□ -0.4
CDH5-208ENST00000614547 NT5C1BQ96P26 610 aa12.53□□□□□ -0.4
CDH5-208ENST00000614547 CD209Q9NNX6 404 aa12.53□□□□□ -0.4
CDH5-208ENST00000614547 RPTORQ8N122 1335 aa12.53□□□□□ -0.4
CDH5-208ENST00000614547 NWD2Q9ULI1 1742 aa12.52□□□□□ -0.4
CDH5-208ENST00000614547 MMP10P09238 476 aa12.52□□□□□ -0.4
CDH5-208ENST00000614547 SERPINB6P35237 376 aa12.52□□□□□ -0.4
CDH5-208ENST00000614547 DLG4P78352 724 aa12.52□□□□□ -0.4
CDH5-208ENST00000614547 ZCWPW2Q504Y3 356 aa12.52□□□□□ -0.4
CDH5-208ENST00000614547 PPP1R18Q6NYC8 613 aa12.52□□□□□ -0.4
CDH5-208ENST00000614547 MIER3Q7Z3K6 550 aa12.52□□□□□ -0.4
CDH5-208ENST00000614547 ECHDC2Q86YB7 292 aa12.52□□□□□ -0.4
CDH5-208ENST00000614547 CFAP57Q96MR6 1250 aa12.52□□□□□ -0.4
CDH5-208ENST00000614547 ZNF577Q9BSK1 485 aa12.52□□□□□ -0.4
CDH5-208ENST00000614547 TBC1D10AQ9BXI6 508 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms