RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 VCAM1P19320 739 aa9.28□□□□□ -0.92
PDE6A-204ENST00000613228 CNGA1P29973 690 aa9.28□□□□□ -0.92
PDE6A-204ENST00000613228 NMT1P30419 496 aaKnown RBP9.28□□□□□ -0.92
PDE6A-204ENST00000613228 DR1Q01658 176 aa9.28□□□□□ -0.92
PDE6A-204ENST00000613228 GRIN1Q05586 938 aa9.28□□□□□ -0.92
PDE6A-204ENST00000613228 NNTQ13423 1086 aa9.28□□□□□ -0.92
PDE6A-204ENST00000613228 KRT71Q3SY84 523 aa9.28□□□□□ -0.92
PDE6A-204ENST00000613228 USP49Q70CQ1 688 aa9.28□□□□□ -0.92
PDE6A-204ENST00000613228 NLRP4Q96MN2 994 aa9.28□□□□□ -0.92
PDE6A-204ENST00000613228 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.28□□□□□ -0.92
PDE6A-204ENST00000613228 TRIM31Q9BZY9 425 aa9.28□□□□□ -0.92
PDE6A-204ENST00000613228 ENC1O14682 589 aa9.27□□□□□ -0.92
PDE6A-204ENST00000613228 MCF2LO15068 1137 aa9.27□□□□□ -0.92
PDE6A-204ENST00000613228 MYBP10242 640 aa9.27□□□□□ -0.92
PDE6A-204ENST00000613228 PCYT1AP49585 367 aa9.27□□□□□ -0.92
PDE6A-204ENST00000613228 GFPT1Q06210 699 aaPredicted RBP9.27□□□□□ -0.92
PDE6A-204ENST00000613228 CENPPQ6IPU0 288 aa9.27□□□□□ -0.92
PDE6A-204ENST00000613228 TTI2Q6NXR4 508 aa9.27□□□□□ -0.92
PDE6A-204ENST00000613228 USP50Q70EL3 339 aaPredicted RBP9.27□□□□□ -0.92
PDE6A-204ENST00000613228 CD302Q8IX05 232 aa9.27□□□□□ -0.92
PDE6A-204ENST00000613228 PALM2Q8IXS6 379 aa9.27□□□□□ -0.92
PDE6A-204ENST00000613228 PROCA1Q8NCQ7 364 aaPredicted RBP9.27□□□□□ -0.92
PDE6A-204ENST00000613228 CCDC68Q9H2F9 335 aa9.27□□□□□ -0.92
PDE6A-204ENST00000613228 COL22A1Q8NFW1 1626 aaPredicted RBP9.27□□□□□ -0.92
PDE6A-204ENST00000613228 KLRG2A4D1S0 409 aaPredicted RBP9.27□□□□□ -0.93
PDE6A-204ENST00000613228 MAP3K7O43318 606 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 SUN1O94901 812 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 FTCDO95954 541 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 SRGAP2BP0DMP2 458 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 SNHG28P0DPA3 235 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 TXNP10599 105 aaKnown RBP9.27□□□□□ -0.93
PDE6A-204ENST00000613228 GARTP22102 1010 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 CHRNA3P32297 505 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 C2orf54Q08AI8 447 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 GIT2Q14161 759 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 NAB2Q15742 525 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 ZNF483Q8TF39 744 aaPredicted RBP9.27□□□□□ -0.93
PDE6A-204ENST00000613228 SCFD2Q8WU76 684 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 TAAR1Q96RJ0 339 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.27□□□□□ -0.93
PDE6A-204ENST00000613228 NWD2Q9ULI1 1742 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 LRRIQ3A6PVS8 624 aaPredicted RBP9.27□□□□□ -0.93
PDE6A-204ENST00000613228 AHCYL1O43865 530 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 GMNNO75496 209 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 TBC1D8O95759 1140 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 RPS6P62753 249 aaKnown RBP9.27□□□□□ -0.93
PDE6A-204ENST00000613228 SREBF2Q12772 1141 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 E4F1Q66K89 784 aaPredicted RBP9.27□□□□□ -0.93
PDE6A-204ENST00000613228 LRRC31Q6UY01 552 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 TMC2Q8TDI7 906 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 KLHL29Q96CT2 875 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 GDAP1L1Q96MZ0 367 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 TXLNGQ9NUQ3 528 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 PRMT7Q9NVM4 692 aaPredicted RBP9.27□□□□□ -0.93
PDE6A-204ENST00000613228 WDR35Q9P2L0 1181 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 SUCLA2Q9P2R7 463 aaPredicted RBP9.27□□□□□ -0.93
PDE6A-204ENST00000613228 CNOT8Q9UFF9 292 aaKnown RBP9.27□□□□□ -0.93
PDE6A-204ENST00000613228 TMCC1O94876 653 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 SUPT20HL2P0C7V6 817 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 TGFB3P10600 412 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 NPEPPSP55786 919 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 DHX34Q14147 1143 aaKnown RBP9.27□□□□□ -0.93
PDE6A-204ENST00000613228 ANKRD13CQ8N6S4 541 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 ACER1Q8TDN7 264 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 ATP2A3Q93084 1043 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 HEXIM2Q96MH2 286 aaKnown RBP9.27□□□□□ -0.93
PDE6A-204ENST00000613228 WDR18Q9BV38 432 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 VPS37BQ9H9H4 285 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 PAPOLBQ9NRJ5 636 aaKnown RBP9.27□□□□□ -0.93
PDE6A-204ENST00000613228 EIF3HO15372 352 aaKnown RBP eCLIP9.27□□□□□ -0.93
PDE6A-204ENST00000613228 MED24O75448 989 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 NR1D1P20393 614 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 NAMPTP43490 491 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 CYP27A1Q02318 531 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 DCAF4L1Q3SXM0 396 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 CCDC62Q6P9F0 684 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 THOC1Q96FV9 657 aaKnown RBP9.27□□□□□ -0.93
PDE6A-204ENST00000613228 ZFYVE28Q9HCC9 887 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 KCNMB3Q9NPA1 279 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 ADAM22Q9P0K1 906 aa9.27□□□□□ -0.93
PDE6A-204ENST00000613228 RGPD5Q99666 1765 aa9.26□□□□□ -0.93
PDE6A-204ENST00000613228 MAPK13O15264 365 aa9.26□□□□□ -0.93
PDE6A-204ENST00000613228 PRPSAP2O60256 369 aa9.26□□□□□ -0.93
PDE6A-204ENST00000613228 GYPCP04921 128 aa9.26□□□□□ -0.93
PDE6A-204ENST00000613228 TMEM253P0C7T8 217 aa9.26□□□□□ -0.93
PDE6A-204ENST00000613228 UCHL3P15374 230 aa9.26□□□□□ -0.93
PDE6A-204ENST00000613228 MARK3P27448 753 aa9.26□□□□□ -0.93
PDE6A-204ENST00000613228 GJA8P48165 433 aa9.26□□□□□ -0.93
PDE6A-204ENST00000613228 SGSM1Q2NKQ1 1148 aa9.26□□□□□ -0.93
PDE6A-204ENST00000613228 KLHDC7AQ5VTJ3 777 aa9.26□□□□□ -0.93
PDE6A-204ENST00000613228 EEPD1Q7L9B9 569 aa9.26□□□□□ -0.93
PDE6A-204ENST00000613228 THEM5Q8N1Q8 247 aa9.26□□□□□ -0.93
PDE6A-204ENST00000613228 C7orf31Q8N865 590 aa9.26□□□□□ -0.93
PDE6A-204ENST00000613228 OR6J1Q8NGC5 347 aa9.26□□□□□ -0.93
PDE6A-204ENST00000613228 ZNF564Q8TBZ8 553 aaPredicted RBP9.26□□□□□ -0.93
PDE6A-204ENST00000613228 FAM167BQ9BTA0 163 aa9.26□□□□□ -0.93
PDE6A-204ENST00000613228 CYP26B1Q9NR63 512 aa9.26□□□□□ -0.93
PDE6A-204ENST00000613228 PARVAQ9NVD7 372 aa9.26□□□□□ -0.93
PDE6A-204ENST00000613228 ERAP1Q9NZ08 941 aa9.26□□□□□ -0.93
PDE6A-204ENST00000613228 TBX20Q9UMR3 447 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms