RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 IL32P24001 234 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 KCNV1Q6PIU1 500 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 ARHGEF19Q8IW93 802 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 UBXN6Q9BZV1 441 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 UBE2OQ9C0C9 1292 aaKnown RBP5.22□□□□□ -1.57
VPS13D-213ENST00000613099 JMJD4Q9H9V9 463 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 DDX56Q9NY93 547 aaKnown RBP5.22□□□□□ -1.57
VPS13D-213ENST00000613099 CLIC5Q9NZA1 410 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 LMO7Q8WWI1 1683 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 MYH11P35749 1972 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 A0A1W2PQ72 361 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 TMEM120BA0PK00 339 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 CCDC130P13994 396 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 EPS8Q12929 822 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 BNIP1Q12981 228 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 NAIPQ13075 1403 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 RESP18Q5W5W9 173 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 MDM1Q8TC05 714 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 NSMCE3Q96MG7 304 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 MTMR9Q96QG7 549 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 ACAT2Q9BWD1 397 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 ITIH6Q6UXX5 1313 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 SNAPC5O75971 98 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 TRIM25Q14258 630 aaKnown RBP5.22□□□□□ -1.57
VPS13D-213ENST00000613099 SLC45A4Q5BKX6 768 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 TXNDC2Q86VQ3 553 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 RSAD2Q8WXG1 361 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 RANBP6O60518 1105 aaKnown RBP5.22□□□□□ -1.57
VPS13D-213ENST00000613099 CHKAP35790 457 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 FOXD4Q12950 439 aaPredicted RBP5.22□□□□□ -1.57
VPS13D-213ENST00000613099 ANKRD13CQ8N6S4 541 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 ASAP3Q8TDY4 903 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 CYGBQ8WWM9 190 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 IRGQQ8WZA9 623 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 UQCC2Q9BRT2 126 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 COMMD10Q9Y6G5 202 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 RNF207Q6ZRF8 634 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 SDR16C5Q8N3Y7 309 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 CEP44Q9C0F1 390 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 MOSPD1Q9UJG1 213 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 VPS4AQ9UN37 437 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 MAP3K19Q56UN5 1328 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 POC1B-GALNT4F8VUJ3 575 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 RNF113AO15541 343 aaKnown RBP5.22□□□□□ -1.57
VPS13D-213ENST00000613099 FAM228BP0C875 321 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 SRGAP2CP0DJJ0 459 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 SRGAP2BP0DMP2 458 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 TARSP26639 723 aaKnown RBP5.22□□□□□ -1.57
VPS13D-213ENST00000613099 GEMIN4P57678 1058 aaKnown RBP5.22□□□□□ -1.57
VPS13D-213ENST00000613099 RESTQ13127 1097 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 TYSND1Q2T9J0 566 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 CYP4F22Q6NT55 531 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 CYP2U1Q7Z449 544 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 GALNT4Q8N4A0 578 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 MB21D1Q8N884 522 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 GIPC2Q8TF65 315 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 ADAM22Q9P0K1 906 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 BTBD3Q9Y2F9 522 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 FAM208AQ9UK61 1670 aaKnown RBP5.22□□□□□ -1.57
VPS13D-213ENST00000613099 MROH7Q68CQ1 1323 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 ZNF521Q96K83 1311 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 GTPBP10A4D1E9 387 aaKnown RBP5.22□□□□□ -1.57
VPS13D-213ENST00000613099 H3BRJ5 948 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 PRKACBP22694 351 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 POU5F1Q01860 360 aaKnown RBP5.22□□□□□ -1.57
VPS13D-213ENST00000613099 DGUOKQ16854 277 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 CCDC137Q6PK04 289 aaKnown RBP5.22□□□□□ -1.57
VPS13D-213ENST00000613099 RBM44Q6ZP01 1051 aaKnown RBP5.22□□□□□ -1.57
VPS13D-213ENST00000613099 TRIM59Q8IWR1 403 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 TMEM87BQ96K49 555 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 CCDC90BQ9GZT6 254 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 CLEC4MQ9H2X3 399 aaPredicted RBP5.22□□□□□ -1.57
VPS13D-213ENST00000613099 PABPC3Q9H361 631 aaKnown RBP5.22□□□□□ -1.57
VPS13D-213ENST00000613099 CABP5Q9NP86 173 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 PZPP20742 1482 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 ARHGEF28Q8N1W1 1705 aaKnown RBP5.22□□□□□ -1.57
VPS13D-213ENST00000613099 PLCG1P19174 1290 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 DRD4P21917 467 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 SMU1Q2TAY7 513 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 NEK10Q6ZWH5 1172 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 SH3KBP1Q96B97 665 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 CLIC6Q96NY7 704 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 MIF4GDA9UHW6 222 aaKnown RBP5.22□□□□□ -1.57
VPS13D-213ENST00000613099 FYNP06241 537 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 KRT16P08779 473 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 LIN52Q52LA3 116 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 SNX32Q86XE0 403 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 CCDC33Q8N5R6 958 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 MINK1Q8N4C8 1332 aaPredicted RBP5.22□□□□□ -1.57
VPS13D-213ENST00000613099 RICTORQ6R327 1708 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 AATKQ6ZMQ8 1374 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 ABCC12Q96J65 1359 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 MROH2AA6NES4 1674 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 NFIBO00712 420 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 SPAG6O75602 509 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 PABPC1P11940 636 aaKnown RBP5.22□□□□□ -1.57
VPS13D-213ENST00000613099 SLC1A1P43005 524 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 AKR1D1P51857 326 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 GNG2P59768 71 aa5.22□□□□□ -1.57
VPS13D-213ENST00000613099 KCNJ2P63252 427 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms