RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 NRG2O14511 850 aaPredicted RBP8.11□□□□□ -1.11
PTCHD3P1-201ENST00000612350 CDX4O14627 284 aaPredicted RBP8.11□□□□□ -1.11
PTCHD3P1-201ENST00000612350 CSDE1O75534 798 aaKnown RBP8.11□□□□□ -1.11
PTCHD3P1-201ENST00000612350 SKIP12755 728 aa8.11□□□□□ -1.11
PTCHD3P1-201ENST00000612350 GRM4Q14833 912 aa8.11□□□□□ -1.11
PTCHD3P1-201ENST00000612350 SEC23AQ15436 765 aa8.11□□□□□ -1.11
PTCHD3P1-201ENST00000612350 FAM160B1Q5W0V3 765 aa8.11□□□□□ -1.11
PTCHD3P1-201ENST00000612350 EFCAB12Q6NXP0 572 aa8.11□□□□□ -1.11
PTCHD3P1-201ENST00000612350 PDXDC2PQ6P474 469 aa8.11□□□□□ -1.11
PTCHD3P1-201ENST00000612350 CASC1Q6TDU7 716 aa8.11□□□□□ -1.11
PTCHD3P1-201ENST00000612350 Q6ZS52 159 aa8.11□□□□□ -1.11
PTCHD3P1-201ENST00000612350 ZNF589Q86UQ0 364 aaPredicted RBP8.11□□□□□ -1.11
PTCHD3P1-201ENST00000612350 MAP4K3Q8IVH8 894 aa8.11□□□□□ -1.11
PTCHD3P1-201ENST00000612350 GLYCTKQ8IVS8 523 aa8.11□□□□□ -1.11
PTCHD3P1-201ENST00000612350 COLGALT2Q8IYK4 626 aa8.11□□□□□ -1.11
PTCHD3P1-201ENST00000612350 DEFB124Q8NES8 71 aa8.11□□□□□ -1.11
PTCHD3P1-201ENST00000612350 HNRNPLLQ8WVV9 542 aaKnown RBP8.11□□□□□ -1.11
PTCHD3P1-201ENST00000612350 ELSPBP1Q96BH3 223 aa8.11□□□□□ -1.11
PTCHD3P1-201ENST00000612350 B3GALT6Q96L58 329 aa8.11□□□□□ -1.11
PTCHD3P1-201ENST00000612350 FAM227BQ96M60 508 aa8.11□□□□□ -1.11
PTCHD3P1-201ENST00000612350 HNRNPABQ99729 332 aaKnown RBP8.11□□□□□ -1.11
PTCHD3P1-201ENST00000612350 MXRA8Q9BRK3 442 aa8.11□□□□□ -1.11
PTCHD3P1-201ENST00000612350 ZNF334Q9HCZ1 680 aaPredicted RBP8.11□□□□□ -1.11
PTCHD3P1-201ENST00000612350 ZNF302Q9NR11 478 aa8.11□□□□□ -1.11
PTCHD3P1-201ENST00000612350 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.11□□□□□ -1.11
PTCHD3P1-201ENST00000612350 RBM12Q9NTZ6 932 aaKnown RBP8.11□□□□□ -1.11
PTCHD3P1-201ENST00000612350 DNMT3BQ9UBC3 853 aaKnown RBP8.11□□□□□ -1.11
PTCHD3P1-201ENST00000612350 KCNH3Q9ULD8 1083 aa8.11□□□□□ -1.11
PTCHD3P1-201ENST00000612350 AKT3Q9Y243 479 aa8.11□□□□□ -1.11
PTCHD3P1-201ENST00000612350 PRG3Q9Y2Y8 225 aaPredicted RBP8.11□□□□□ -1.11
PTCHD3P1-201ENST00000612350 A0A0D9SFI3 127 aa8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 LNP1A1A4G5 178 aa8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 F8W810 466 aa8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 BACH1O14867 736 aa8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 CCL16O15467 120 aa8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 MAGEB2O15479 319 aa8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 RPP40O75818 363 aaKnown RBP8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 POMCP01189 267 aa8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 POU2F2P09086 479 aa8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 FCARP24071 287 aa8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 CCNE1P24864 410 aa8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 CHMLP26374 656 aa8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 HOXA9P31269 272 aa8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 FGD1P98174 961 aa8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 SCAPQ12770 1279 aa8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 NMIQ13287 307 aaPredicted RBP8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 GRM2Q14416 872 aa8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 PLK5Q496M5 336 aa8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 IFIT1BQ5T764 474 aaKnown RBP8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 TWF2Q6IBS0 349 aaKnown RBP8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 SWSAP1Q6NVH7 229 aa8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 CWC27Q6UX04 472 aaKnown RBP8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 MRPL10Q7Z7H8 261 aaKnown RBP8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 LRRC71Q8N4P6 559 aa8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 SPRYD3Q8NCJ5 442 aa8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 ING5Q8WYH8 240 aa8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 MCRS1Q96EZ8 462 aa8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 FAM193BQ96PV7 902 aaPredicted RBP8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 MAP7D2Q96T17 732 aa8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 SDF4Q9BRK5 362 aa8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 GPR62Q9BZJ7 368 aa8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 BRD9Q9H8M2 597 aa8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 AGO4Q9HCK5 861 aaKnown RBP8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 HCFC1R1Q9NWW0 138 aa8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 KIAA1468Q9P260 1216 aa8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 KANSL3Q9P2N6 904 aa8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 MAFBQ9Y5Q3 323 aaPredicted RBP8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 PIAS3Q9Y6X2 628 aa8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 URB1O60287 2271 aaKnown RBP8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 NUP205Q92621 2012 aa8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 LOC400499M0QZD8 3231 aa8.1□□□□□ -1.11
PTCHD3P1-201ENST00000612350 APC2O95996 2303 aa8.09□□□□□ -1.11
PTCHD3P1-201ENST00000612350 WDFY3Q8IZQ1 3526 aa8.09□□□□□ -1.11
PTCHD3P1-201ENST00000612350 CCDC163A0A0D9SF12 145 aa8.09□□□□□ -1.11
PTCHD3P1-201ENST00000612350 ZNF213O14771 459 aa8.09□□□□□ -1.11
PTCHD3P1-201ENST00000612350 EIF5BO60841 1220 aaKnown RBP8.09□□□□□ -1.11
PTCHD3P1-201ENST00000612350 AKAP3O75969 853 aa8.09□□□□□ -1.11
PTCHD3P1-201ENST00000612350 C8AP07357 584 aa8.09□□□□□ -1.11
PTCHD3P1-201ENST00000612350 RAB27AP51159 221 aa8.09□□□□□ -1.11
PTCHD3P1-201ENST00000612350 MLLT6P55198 1093 aaPredicted RBP8.09□□□□□ -1.11
PTCHD3P1-201ENST00000612350 DSC1Q08554 894 aa8.09□□□□□ -1.11
PTCHD3P1-201ENST00000612350 SLC5A9Q2M3M2 681 aa8.09□□□□□ -1.11
PTCHD3P1-201ENST00000612350 PABPC1LQ4VXU2 614 aaKnown RBP8.09□□□□□ -1.11
PTCHD3P1-201ENST00000612350 PPM1LQ5SGD2 360 aa8.09□□□□□ -1.11
PTCHD3P1-201ENST00000612350 NYAP1Q6ZVC0 841 aa8.09□□□□□ -1.11
PTCHD3P1-201ENST00000612350 URGCPQ8TCY9 931 aa8.09□□□□□ -1.11
PTCHD3P1-201ENST00000612350 PIBF1Q8WXW3 757 aa8.09□□□□□ -1.11
PTCHD3P1-201ENST00000612350 IRF7Q92985 503 aa8.09□□□□□ -1.11
PTCHD3P1-201ENST00000612350 PGBD4Q96DM1 585 aa8.09□□□□□ -1.11
PTCHD3P1-201ENST00000612350 LRIG1Q96JA1 1093 aa8.09□□□□□ -1.11
PTCHD3P1-201ENST00000612350 DSCC1Q9BVC3 393 aa8.09□□□□□ -1.11
PTCHD3P1-201ENST00000612350 TRMT61BQ9BVS5 477 aaKnown RBP8.09□□□□□ -1.11
PTCHD3P1-201ENST00000612350 LY9Q9HBG7 655 aa8.09□□□□□ -1.11
PTCHD3P1-201ENST00000612350 TMEM9BQ9NQ34 198 aa8.09□□□□□ -1.11
PTCHD3P1-201ENST00000612350 GDE1Q9NZC3 331 aa8.09□□□□□ -1.11
PTCHD3P1-201ENST00000612350 PCDHA6Q9UN73 950 aa8.09□□□□□ -1.11
PTCHD3P1-201ENST00000612350 PCDHB2Q9Y5E7 798 aa8.09□□□□□ -1.11
PTCHD3P1-201ENST00000612350 PCDHA8Q9Y5H6 950 aa8.09□□□□□ -1.11
PTCHD3P1-201ENST00000612350 RAI2Q9Y5P3 530 aa8.09□□□□□ -1.11
PTCHD3P1-201ENST00000612350 PLXNB3Q9ULL4 1909 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms