RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 DAW1Q8N136 415 aa13.52□□□□□ -0.25
CBWD3-208ENST00000612050 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.52□□□□□ -0.25
CBWD3-208ENST00000612050 KCNG4Q8TDN1 519 aa13.52□□□□□ -0.25
CBWD3-208ENST00000612050 FOXD4L4Q8WXT5 416 aaPredicted RBP13.52□□□□□ -0.25
CBWD3-208ENST00000612050 ACO2Q99798 780 aaKnown RBP13.52□□□□□ -0.25
CBWD3-208ENST00000612050 REEP2Q9BRK0 252 aa13.52□□□□□ -0.25
CBWD3-208ENST00000612050 ZBP1Q9H171 429 aa13.52□□□□□ -0.25
CBWD3-208ENST00000612050 SLC38A7Q9NVC3 462 aa13.52□□□□□ -0.25
CBWD3-208ENST00000612050 ANKFY1Q9P2R3 1169 aa13.52□□□□□ -0.25
CBWD3-208ENST00000612050 ATP6V1DQ9Y5K8 247 aa13.52□□□□□ -0.25
CBWD3-208ENST00000612050 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.52□□□□□ -0.25
CBWD3-208ENST00000612050 TRAK2O60296 914 aa13.51□□□□□ -0.25
CBWD3-208ENST00000612050 TOM1L1O75674 476 aa13.51□□□□□ -0.25
CBWD3-208ENST00000612050 SOD2P04179 222 aa13.51□□□□□ -0.25
CBWD3-208ENST00000612050 HARSP12081 509 aaKnown RBP13.51□□□□□ -0.25
CBWD3-208ENST00000612050 GRM5P41594 1212 aa13.51□□□□□ -0.25
CBWD3-208ENST00000612050 AMPD3Q01432 767 aa13.51□□□□□ -0.25
CBWD3-208ENST00000612050 GRIN1Q05586 938 aa13.51□□□□□ -0.25
CBWD3-208ENST00000612050 ELAVL2Q12926 359 aaKnown RBP13.51□□□□□ -0.25
CBWD3-208ENST00000612050 MAPK7Q13164 816 aa13.51□□□□□ -0.25
CBWD3-208ENST00000612050 NOLC1Q14978 699 aaKnown RBP eCLIP13.51□□□□□ -0.25
CBWD3-208ENST00000612050 CLUL1Q15846 466 aa13.51□□□□□ -0.25
CBWD3-208ENST00000612050 SPECC1Q5M775 1068 aa13.51□□□□□ -0.25
CBWD3-208ENST00000612050 HAUS6Q7Z4H7 955 aa13.51□□□□□ -0.25
CBWD3-208ENST00000612050 ZBTB33Q86T24 672 aa13.51□□□□□ -0.25
CBWD3-208ENST00000612050 EPSTI1Q96J88 318 aa13.51□□□□□ -0.25
CBWD3-208ENST00000612050 UROC1Q96N76 676 aa13.51□□□□□ -0.25
CBWD3-208ENST00000612050 ACAP3Q96P50 834 aa13.51□□□□□ -0.25
CBWD3-208ENST00000612050 PYM1Q9BRP8 204 aaKnown RBP13.51□□□□□ -0.25
CBWD3-208ENST00000612050 TARS2Q9BW92 718 aaKnown RBP13.51□□□□□ -0.25
CBWD3-208ENST00000612050 DZANK1Q9NVP4 752 aa13.51□□□□□ -0.25
CBWD3-208ENST00000612050 FAM13BQ9NYF5 915 aa13.51□□□□□ -0.25
CBWD3-208ENST00000612050 IRAK3Q9Y616 596 aa13.51□□□□□ -0.25
CBWD3-208ENST00000612050 SF3B1O75533 1304 aaKnown RBP eCLIP13.51□□□□□ -0.25
CBWD3-208ENST00000612050 EYSQ5T1H1 3165 aa13.51□□□□□ -0.25
CBWD3-208ENST00000612050 C2orf71A6NGG8 1288 aa13.5□□□□□ -0.25
CBWD3-208ENST00000612050 HNRNPDLO14979 420 aaKnown RBP13.5□□□□□ -0.25
CBWD3-208ENST00000612050 LINC01565O15544 149 aa13.5□□□□□ -0.25
CBWD3-208ENST00000612050 CUTAO60888 179 aa13.5□□□□□ -0.25
CBWD3-208ENST00000612050 TBX10O75333 385 aa13.5□□□□□ -0.25
CBWD3-208ENST00000612050 ADH1AP07327 375 aa13.5□□□□□ -0.25
CBWD3-208ENST00000612050 MAPTP10636 758 aaKnown RBP13.5□□□□□ -0.25
CBWD3-208ENST00000612050 KLRC2P26717 231 aa13.5□□□□□ -0.25
CBWD3-208ENST00000612050 GTF2F1P35269 517 aaKnown RBP eCLIP13.5□□□□□ -0.25
CBWD3-208ENST00000612050 GLUD2P49448 558 aa13.5□□□□□ -0.25
CBWD3-208ENST00000612050 NCKAP1LP55160 1127 aa13.5□□□□□ -0.25
CBWD3-208ENST00000612050 DSC1Q08554 894 aa13.5□□□□□ -0.25
CBWD3-208ENST00000612050 COASYQ13057 564 aa13.5□□□□□ -0.25
CBWD3-208ENST00000612050 HSP90AA2PQ14568 343 aaPredicted RBP13.5□□□□□ -0.25
CBWD3-208ENST00000612050 NT5DC1Q5TFE4 455 aa13.5□□□□□ -0.25
CBWD3-208ENST00000612050 EEF1DP3Q658K8 133 aa13.5□□□□□ -0.25
CBWD3-208ENST00000612050 LLGL2Q6P1M3 1020 aa13.5□□□□□ -0.25
CBWD3-208ENST00000612050 PDXDC1Q6P996 788 aa13.5□□□□□ -0.25
CBWD3-208ENST00000612050 STXBP4Q6ZWJ1 553 aa13.5□□□□□ -0.25
CBWD3-208ENST00000612050 LINC00301Q8NCQ3 95 aa13.5□□□□□ -0.25
CBWD3-208ENST00000612050 TMEM161BQ8NDZ6 487 aa13.5□□□□□ -0.25
CBWD3-208ENST00000612050 CLIC6Q96NY7 704 aa13.5□□□□□ -0.25
CBWD3-208ENST00000612050 HERC2P3Q9BVR0 1158 aa13.5□□□□□ -0.25
CBWD3-208ENST00000612050 CUEDC2Q9H467 287 aa13.5□□□□□ -0.25
CBWD3-208ENST00000612050 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.5□□□□□ -0.25
CBWD3-208ENST00000612050 BLOC1S4Q9NUP1 217 aa13.5□□□□□ -0.25
CBWD3-208ENST00000612050 TFIP11Q9UBB9 837 aaKnown RBP13.5□□□□□ -0.25
CBWD3-208ENST00000612050 SEL1LQ9UBV2 794 aa13.5□□□□□ -0.25
CBWD3-208ENST00000612050 ADAM28Q9UKQ2 775 aa13.5□□□□□ -0.25
CBWD3-208ENST00000612050 BARX2Q9UMQ3 279 aaPredicted RBP13.5□□□□□ -0.25
CBWD3-208ENST00000612050 PCDHGC5Q9Y5F6 944 aa13.5□□□□□ -0.25
CBWD3-208ENST00000612050 NPHP3-ACAD11A0A0J9YXS1 232 aa13.49□□□□□ -0.25
CBWD3-208ENST00000612050 HIDE1A8MVS5 230 aa13.49□□□□□ -0.25
CBWD3-208ENST00000612050 MBTPS2O43462 519 aa13.49□□□□□ -0.25
CBWD3-208ENST00000612050 XPOTO43592 962 aaKnown RBP13.49□□□□□ -0.25
CBWD3-208ENST00000612050 TRAPPC3O43617 180 aa13.49□□□□□ -0.25
CBWD3-208ENST00000612050 IL9P15248 144 aa13.49□□□□□ -0.25
CBWD3-208ENST00000612050 GAP43P17677 238 aa13.49□□□□□ -0.25
CBWD3-208ENST00000612050 ME1P48163 572 aa13.49□□□□□ -0.25
CBWD3-208ENST00000612050 AFF1P51825 1210 aaKnown RBP13.49□□□□□ -0.25
CBWD3-208ENST00000612050 OSTNP61366 133 aa13.49□□□□□ -0.25
CBWD3-208ENST00000612050 USP41Q3LFD5 358 aa13.49□□□□□ -0.25
CBWD3-208ENST00000612050 DYMQ7RTS9 669 aa13.49□□□□□ -0.25
CBWD3-208ENST00000612050 CDT1Q9H211 546 aa13.49□□□□□ -0.25
CBWD3-208ENST00000612050 EXOC7Q9UPT5 735 aa13.49□□□□□ -0.25
CBWD3-208ENST00000612050 CASTOR2A6NHX0 329 aa13.48□□□□□ -0.25
CBWD3-208ENST00000612050 TTLL13PA6NNM8 815 aa13.48□□□□□ -0.25
CBWD3-208ENST00000612050 C2CD2LO14523 706 aa13.48□□□□□ -0.25
CBWD3-208ENST00000612050 IDEP14735 1019 aa13.48□□□□□ -0.25
CBWD3-208ENST00000612050 LTBRP36941 435 aa13.48□□□□□ -0.25
CBWD3-208ENST00000612050 SMAD2Q15796 467 aaKnown RBP13.48□□□□□ -0.25
CBWD3-208ENST00000612050 FOXD4L6Q3SYB3 417 aaPredicted RBP13.48□□□□□ -0.25
CBWD3-208ENST00000612050 ARSHQ5FYA8 562 aa13.48□□□□□ -0.25
CBWD3-208ENST00000612050 SLFN12LQ6IEE8 588 aa13.48□□□□□ -0.25
CBWD3-208ENST00000612050 ANKRD54Q6NXT1 300 aa13.48□□□□□ -0.25
CBWD3-208ENST00000612050 FUT10Q6P4F1 479 aa13.48□□□□□ -0.25
CBWD3-208ENST00000612050 FOXD4L3Q6VB84 417 aaPredicted RBP13.48□□□□□ -0.25
CBWD3-208ENST00000612050 TMEM184AQ6ZMB5 413 aa13.48□□□□□ -0.25
CBWD3-208ENST00000612050 TMEM173Q86WV6 379 aaPredicted RBP13.48□□□□□ -0.25
CBWD3-208ENST00000612050 CCDC65Q8IXS2 484 aa13.48□□□□□ -0.25
CBWD3-208ENST00000612050 GJD3Q8N144 294 aa13.48□□□□□ -0.25
CBWD3-208ENST00000612050 IQUBQ8NA54 791 aa13.48□□□□□ -0.25
CBWD3-208ENST00000612050 SMRP1Q8NCR6 262 aa13.48□□□□□ -0.25
CBWD3-208ENST00000612050 DDX12PQ92771 950 aa13.48□□□□□ -0.25
CBWD3-208ENST00000612050 HVCN1Q96D96 273 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms