RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 SPATA1Q5VX52 437 aa9.65□□□□□ -0.86
SMAD4-217ENST00000611848 HAUS6Q7Z4H7 955 aa9.65□□□□□ -0.86
SMAD4-217ENST00000611848 APBB1IPQ7Z5R6 666 aaPredicted RBP9.65□□□□□ -0.86
SMAD4-217ENST00000611848 MRPL10Q7Z7H8 261 aaKnown RBP9.65□□□□□ -0.86
SMAD4-217ENST00000611848 CCDC65Q8IXS2 484 aa9.65□□□□□ -0.86
SMAD4-217ENST00000611848 CMTR2Q8IYT2 770 aaKnown RBP9.65□□□□□ -0.86
SMAD4-217ENST00000611848 HACE1Q8IYU2 909 aa9.65□□□□□ -0.86
SMAD4-217ENST00000611848 FIBCD1Q8N539 461 aa9.65□□□□□ -0.86
SMAD4-217ENST00000611848 C7orf25Q9BPX7 421 aa9.65□□□□□ -0.86
SMAD4-217ENST00000611848 ADPGKQ9BRR6 497 aa9.65□□□□□ -0.86
SMAD4-217ENST00000611848 TRIM6Q9C030 488 aaPredicted RBP9.65□□□□□ -0.86
SMAD4-217ENST00000611848 TMEM117Q9H0C3 514 aa9.65□□□□□ -0.86
SMAD4-217ENST00000611848 SEMA6BQ9H3T3 888 aa9.65□□□□□ -0.86
SMAD4-217ENST00000611848 ST6GALNAC4Q9H4F1 302 aa9.65□□□□□ -0.86
SMAD4-217ENST00000611848 LCHNA4D1U4 455 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 LINC01553A4QN01 128 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 K7ENM7 598 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 MYL1P05976 194 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 IDEP14735 1019 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 CD44P16070 742 aaKnown RBP9.64□□□□□ -0.87
SMAD4-217ENST00000611848 ATF7P17544 494 aaPredicted RBP9.64□□□□□ -0.87
SMAD4-217ENST00000611848 CASP1P29466 404 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 GTF2BQ00403 316 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 TBX2Q13207 712 aaPredicted RBP9.64□□□□□ -0.87
SMAD4-217ENST00000611848 DCAF4L1Q3SXM0 396 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 HERC4Q5GLZ8 1057 aaPredicted RBP9.64□□□□□ -0.87
SMAD4-217ENST00000611848 ATF7IP2Q5U623 682 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 NYAP1Q6ZVC0 841 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 TAS1R3Q7RTX0 852 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 ABI1Q8IZP0 508 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 RNF169Q8NCN4 708 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 STAMQ92783 540 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 SAMD11Q96NU1 681 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 TGS1Q96RS0 853 aaKnown RBP9.64□□□□□ -0.87
SMAD4-217ENST00000611848 FIZ1Q96SL8 496 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 ACO2Q99798 780 aaKnown RBP9.64□□□□□ -0.87
SMAD4-217ENST00000611848 TTYH1Q9H313 450 aaPredicted RBP9.64□□□□□ -0.87
SMAD4-217ENST00000611848 PDZD7Q9H5P4 517 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 UBN1Q9NPG3 1134 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 OLFML3Q9NRN5 406 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 PANK4Q9NVE7 773 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 WDR70Q9NW82 654 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 TNFSF13BQ9Y275 285 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 RWDD3Q9Y3V2 267 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 RALGAPA2Q2PPJ7 1873 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 A0A1B0GTH6 734 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 TTLL13PA6NNM8 815 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 TBKBP1A7MCY6 615 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 NPTXRO95502 500 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 EDN1P05305 212 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 FGFR1P11362 822 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 ITGA4P13612 1032 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 ERVK-21P61565 698 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 ASIC1P78348 528 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 ALCAMQ13740 583 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 NR1I3Q14994 352 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 TPD52L1Q16890 204 aaPredicted RBP9.64□□□□□ -0.87
SMAD4-217ENST00000611848 CDKAL1Q5VV42 579 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 ZPBP2Q6X784 338 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 UNC13DQ70J99 1090 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 APTXQ7Z2E3 356 aaKnown RBP9.64□□□□□ -0.87
SMAD4-217ENST00000611848 ZNF720Q7Z2F6 126 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 SFR1Q86XK3 245 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 CCAR2Q8N163 923 aaKnown RBP9.64□□□□□ -0.87
SMAD4-217ENST00000611848 DEFB123Q8N688 67 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 SMG8Q8ND04 991 aaKnown RBP9.64□□□□□ -0.87
SMAD4-217ENST00000611848 CLP1Q92989 425 aaKnown RBP9.64□□□□□ -0.87
SMAD4-217ENST00000611848 HVCN1Q96D96 273 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 CASD1Q96PB1 797 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 EIF2AQ9BY44 585 aaKnown RBP9.64□□□□□ -0.87
SMAD4-217ENST00000611848 MRPL9Q9BYD2 267 aaKnown RBP9.64□□□□□ -0.87
SMAD4-217ENST00000611848 MRPL44Q9H9J2 332 aaKnown RBP9.64□□□□□ -0.87
SMAD4-217ENST00000611848 SAMSN1Q9NSI8 373 aaKnown RBP9.64□□□□□ -0.87
SMAD4-217ENST00000611848 RNF19AQ9NV58 838 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 RMND1Q9NWS8 449 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 TBX20Q9UMR3 447 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 IPPQ9Y573 584 aa9.64□□□□□ -0.87
SMAD4-217ENST00000611848 TRIP11Q15643 1979 aa9.63□□□□□ -0.87
SMAD4-217ENST00000611848 CITO14578 2027 aa9.63□□□□□ -0.87
SMAD4-217ENST00000611848 PVALEFA0A1B0GWK0 134 aa9.63□□□□□ -0.87
SMAD4-217ENST00000611848 USP27XA6NNY8 438 aa9.63□□□□□ -0.87
SMAD4-217ENST00000611848 ARHGEF15O94989 841 aa9.63□□□□□ -0.87
SMAD4-217ENST00000611848 TNNT1P13805 278 aa9.63□□□□□ -0.87
SMAD4-217ENST00000611848 CDK11BP21127 795 aaKnown RBP9.63□□□□□ -0.87
SMAD4-217ENST00000611848 PROZP22891 400 aa9.63□□□□□ -0.87
SMAD4-217ENST00000611848 NMT1P30419 496 aaKnown RBP9.63□□□□□ -0.87
SMAD4-217ENST00000611848 GATMP50440 423 aa9.63□□□□□ -0.87
SMAD4-217ENST00000611848 COASYQ13057 564 aa9.63□□□□□ -0.87
SMAD4-217ENST00000611848 KCNB1Q14721 858 aa9.63□□□□□ -0.87
SMAD4-217ENST00000611848 PAN2Q504Q3 1202 aaKnown RBP9.63□□□□□ -0.87
SMAD4-217ENST00000611848 CLLU1OSQ5K130 101 aa9.63□□□□□ -0.87
SMAD4-217ENST00000611848 ZNF658Q5TYW1 1059 aaPredicted RBP9.63□□□□□ -0.87
SMAD4-217ENST00000611848 E4F1Q66K89 784 aaPredicted RBP9.63□□□□□ -0.87
SMAD4-217ENST00000611848 GLB1LQ6UWU2 654 aa9.63□□□□□ -0.87
SMAD4-217ENST00000611848 AGMOQ6ZNB7 445 aa9.63□□□□□ -0.87
SMAD4-217ENST00000611848 CDR2LQ86X02 465 aaPredicted RBP9.63□□□□□ -0.87
SMAD4-217ENST00000611848 LRRC43Q8N309 656 aa9.63□□□□□ -0.87
SMAD4-217ENST00000611848 CCDC112Q8NEF3 446 aa9.63□□□□□ -0.87
SMAD4-217ENST00000611848 HELQQ8TDG4 1101 aa9.63□□□□□ -0.87
SMAD4-217ENST00000611848 LPPQ93052 612 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms