RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 GUCY1A3Q02108 690 aa15.12■□□□□ 0.01
PCDHB16-201ENST00000609684 TAP1Q03518 808 aa15.12■□□□□ 0.01
PCDHB16-201ENST00000609684 KLHDC7AQ5VTJ3 777 aa15.12■□□□□ 0.01
PCDHB16-201ENST00000609684 ATP11CQ8NB49 1132 aa15.12■□□□□ 0.01
PCDHB16-201ENST00000609684 RBM46Q8TBY0 533 aaKnown RBP15.12■□□□□ 0.01
PCDHB16-201ENST00000609684 ANKRD7Q92527 254 aa15.12■□□□□ 0.01
PCDHB16-201ENST00000609684 MKNK1Q9BUB5 465 aa15.12■□□□□ 0.01
PCDHB16-201ENST00000609684 NPEPPSP55786 919 aa15.12■□□□□ 0.01
PCDHB16-201ENST00000609684 NCOA4Q13772 614 aa15.12■□□□□ 0.01
PCDHB16-201ENST00000609684 RASIP1Q5U651 963 aa15.12■□□□□ 0.01
PCDHB16-201ENST00000609684 C1orf228Q6PIY5 440 aa15.12■□□□□ 0.01
PCDHB16-201ENST00000609684 FASTKD5Q7L8L6 764 aaKnown RBP15.12■□□□□ 0.01
PCDHB16-201ENST00000609684 ATL2Q8NHH9 583 aa15.12■□□□□ 0.01
PCDHB16-201ENST00000609684 VPS11Q9H270 941 aa15.12■□□□□ 0.01
PCDHB16-201ENST00000609684 POLRMTO00411 1230 aaKnown RBP15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 MAGEA9P43362 315 aa15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 ST3GAL1Q11201 340 aa15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 ANGEL2Q5VTE6 544 aaKnown RBP15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 REXO1L1PQ8IX06 675 aa15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 FBXO41Q8TF61 875 aa15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 SEPT1Q8WYJ6 367 aa15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 DHX38Q92620 1227 aaKnown RBP15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 EXT2Q93063 718 aa15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 TTC1Q99614 292 aa15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 CYP11B2P19099 503 aa15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 TSPY1Q01534 308 aa15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 SATB1Q01826 763 aa15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 STYK1Q6J9G0 422 aa15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 KLC3Q6P597 504 aa15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 EP400NLQ6ZTU2 488 aa15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 SH2D3CQ8N5H7 860 aa15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 UBN1Q9NPG3 1134 aa15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 FBXO28Q9NVF7 368 aa15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 ART3Q13508 389 aa15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 MMS22LQ6ZRQ5 1243 aa15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 ACAP3Q96P50 834 aa15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 TGS1Q96RS0 853 aaKnown RBP15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 POLR3CQ9BUI4 534 aaPredicted RBP15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 MOV10L1Q9BXT6 1211 aaKnown RBP15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 GOLPH3Q9H4A6 298 aa15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 TCRBV5S4A2TA0A5A2 114 aa15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 PLEKP08567 350 aaPredicted RBP15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 NME3Q13232 169 aa15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 RBBP8NLQ8NC74 664 aaPredicted RBP15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 C18orf8Q96DM3 657 aa15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 CHMP6Q96FZ7 201 aa15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 RTFDC1Q9BY42 306 aaPredicted RBP15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 VWDEQ8N2E2 1590 aa15.11■□□□□ 0.01
PCDHB16-201ENST00000609684 TAF11Q15544 211 aa15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 GJB7Q6PEY0 223 aa15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 FSD1LQ9BXM9 530 aa15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 VIPAS39Q9H9C1 493 aa15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 DCTN4Q9UJW0 460 aa15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 AGAP1Q9UPQ3 857 aa15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 ARHGEF28Q8N1W1 1705 aaKnown RBP15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 RIMBP3CA6NJZ7 1639 aa15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 RIMBP3BA6NNM3 1639 aa15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 RIMBP3Q9UFD9 1639 aa15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 PHF2O75151 1096 aa15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 ERVK-24P63145 666 aa15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 COG7P83436 770 aa15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 TRIM67Q6ZTA4 783 aa15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 TEX2Q8IWB9 1127 aa15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 TMEM117Q9H0C3 514 aa15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 PPP1R9AQ9ULJ8 1098 aa15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 NWD1Q149M9 1564 aa15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 FAM205AQ6ZU69 1335 aa15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 BNIP3LO60238 219 aa15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 PAMP19021 973 aa15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 ELF1P32519 619 aa15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 MXD4Q14582 209 aaPredicted RBP15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 TKFCQ3LXA3 575 aa15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 EFHC2Q5JST6 749 aa15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 CDKL3Q8IVW4 592 aaPredicted RBP15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 RIN2Q8WYP3 895 aaPredicted RBP15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 HVCN1Q96D96 273 aa15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 ATG4CQ96DT6 458 aa15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 CACYBPQ9HB71 228 aaKnown RBP15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 NEURL4Q96JN8 1562 aa15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 PIK3R2O00459 728 aa15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 ZBTB24O43167 697 aaPredicted RBP15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 GYS1P13807 737 aa15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 AP1B1Q10567 949 aa15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 PDZD8Q8NEN9 1154 aa15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 ANKS1AQ92625 1134 aa15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 RUSC1Q9BVN2 902 aa15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 PLAGL2Q9UPG8 496 aa15.1■□□□□ 0.01
PCDHB16-201ENST00000609684 TMEM253P0C7T8 217 aa15.09■□□□□ 0.01
PCDHB16-201ENST00000609684 PEX19P40855 299 aa15.09■□□□□ 0.01
PCDHB16-201ENST00000609684 RPS6P62753 249 aaKnown RBP15.09■□□□□ 0.01
PCDHB16-201ENST00000609684 SMAD1Q15797 465 aaKnown RBP15.09■□□□□ 0.01
PCDHB16-201ENST00000609684 PKN1Q16512 942 aa15.09■□□□□ 0.01
PCDHB16-201ENST00000609684 KCTD17Q8N5Z5 321 aa15.09■□□□□ 0.01
PCDHB16-201ENST00000609684 ACER1Q8TDN7 264 aa15.09■□□□□ 0.01
PCDHB16-201ENST00000609684 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.09■□□□□ 0.01
PCDHB16-201ENST00000609684 SPDL1Q96EA4 605 aa15.09■□□□□ 0.01
PCDHB16-201ENST00000609684 MYOZ2Q9NPC6 264 aa15.09■□□□□ 0.01
PCDHB16-201ENST00000609684 KBTBD4Q9NVX7 518 aa15.09■□□□□ 0.01
PCDHB16-201ENST00000609684 DONSONQ9NYP3 566 aa15.09■□□□□ 0.01
PCDHB16-201ENST00000609684 GGA3Q9NZ52 723 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms