RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 RECQL4O94761 1208 aa15.63■□□□□ 0.09
HDDC2-209ENST00000609477 MYL1P05976 194 aa15.63■□□□□ 0.09
HDDC2-209ENST00000609477 THP07101 528 aa15.63■□□□□ 0.09
HDDC2-209ENST00000609477 SLFN14P0C7P3 912 aa15.63■□□□□ 0.09
HDDC2-209ENST00000609477 IDEP14735 1019 aa15.63■□□□□ 0.09
HDDC2-209ENST00000609477 LIG4P49917 911 aa15.63■□□□□ 0.09
HDDC2-209ENST00000609477 SCNN1GP51170 649 aa15.63■□□□□ 0.09
HDDC2-209ENST00000609477 AFF1P51825 1210 aaKnown RBP15.63■□□□□ 0.09
HDDC2-209ENST00000609477 COL19A1Q14993 1142 aa15.63■□□□□ 0.09
HDDC2-209ENST00000609477 XKR4Q5GH76 650 aa15.63■□□□□ 0.09
HDDC2-209ENST00000609477 HERC4Q5GLZ8 1057 aaPredicted RBP15.63■□□□□ 0.09
HDDC2-209ENST00000609477 SLFN12LQ6IEE8 588 aa15.63■□□□□ 0.09
HDDC2-209ENST00000609477 STXBP4Q6ZWJ1 553 aa15.63■□□□□ 0.09
HDDC2-209ENST00000609477 SFR1Q86XK3 245 aa15.63■□□□□ 0.09
HDDC2-209ENST00000609477 CEP57L1Q8IYX8 460 aa15.63■□□□□ 0.09
HDDC2-209ENST00000609477 HLA-CQ95604 372 aa15.63■□□□□ 0.09
HDDC2-209ENST00000609477 ZFP42Q96MM3 310 aa15.63■□□□□ 0.09
HDDC2-209ENST00000609477 ACAP3Q96P50 834 aa15.63■□□□□ 0.09
HDDC2-209ENST00000609477 TSPAN18Q96SJ8 248 aa15.63■□□□□ 0.09
HDDC2-209ENST00000609477 CDCA3Q99618 268 aaPredicted RBP15.63■□□□□ 0.09
HDDC2-209ENST00000609477 STRA6Q9BX79 667 aa15.63■□□□□ 0.09
HDDC2-209ENST00000609477 MRPL44Q9H9J2 332 aaKnown RBP15.63■□□□□ 0.09
HDDC2-209ENST00000609477 PANK4Q9NVE7 773 aa15.63■□□□□ 0.09
HDDC2-209ENST00000609477 THEGQ9P2T0 379 aa15.63■□□□□ 0.09
HDDC2-209ENST00000609477 EXOC7Q9UPT5 735 aa15.63■□□□□ 0.09
HDDC2-209ENST00000609477 HPSEQ9Y251 543 aa15.63■□□□□ 0.09
HDDC2-209ENST00000609477 USP20Q9Y2K6 914 aa15.63■□□□□ 0.09
HDDC2-209ENST00000609477 PRUNE2Q8WUY3 3088 aa15.62■□□□□ 0.09
HDDC2-209ENST00000609477 NRP1O14786 923 aa15.62■□□□□ 0.09
HDDC2-209ENST00000609477 FSCN2O14926 492 aa15.62■□□□□ 0.09
HDDC2-209ENST00000609477 PPP1R37O75864 691 aa15.62■□□□□ 0.09
HDDC2-209ENST00000609477 DNAJB1P25685 340 aa15.62■□□□□ 0.09
HDDC2-209ENST00000609477 NMT1P30419 496 aaKnown RBP15.62■□□□□ 0.09
HDDC2-209ENST00000609477 SLC11A1P49279 550 aa15.62■□□□□ 0.09
HDDC2-209ENST00000609477 POU5F1Q01860 360 aaKnown RBP15.62■□□□□ 0.09
HDDC2-209ENST00000609477 TUSC3Q13454 348 aa15.62■□□□□ 0.09
HDDC2-209ENST00000609477 SKIV2LQ15477 1246 aaKnown RBP15.62■□□□□ 0.09
HDDC2-209ENST00000609477 ALKAL1Q6UXT8 129 aa15.62■□□□□ 0.09
HDDC2-209ENST00000609477 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.62■□□□□ 0.09
HDDC2-209ENST00000609477 MICAL1Q8TDZ2 1067 aa15.62■□□□□ 0.09
HDDC2-209ENST00000609477 COLEC11Q9BWP8 271 aa15.62■□□□□ 0.09
HDDC2-209ENST00000609477 GBP3Q9H0R5 595 aa15.62■□□□□ 0.09
HDDC2-209ENST00000609477 PLEKHA5Q9HAU0 1116 aa15.62■□□□□ 0.09
HDDC2-209ENST00000609477 SLC38A7Q9NVC3 462 aa15.62■□□□□ 0.09
HDDC2-209ENST00000609477 MIOSQ9NXC5 875 aa15.62■□□□□ 0.09
HDDC2-209ENST00000609477 DNAJB4Q9UDY4 337 aa15.62■□□□□ 0.09
HDDC2-209ENST00000609477 GDAQ9Y2T3 454 aa15.62■□□□□ 0.09
HDDC2-209ENST00000609477 IRAK3Q9Y616 596 aa15.62■□□□□ 0.09
HDDC2-209ENST00000609477 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.61■□□□□ 0.09
HDDC2-209ENST00000609477 PVALEFA0A1B0GWK0 134 aa15.61■□□□□ 0.09
HDDC2-209ENST00000609477 PFKFB1P16118 471 aa15.61■□□□□ 0.09
HDDC2-209ENST00000609477 POSTNQ15063 836 aa15.61■□□□□ 0.09
HDDC2-209ENST00000609477 TCEAL5Q5H9L2 206 aa15.61■□□□□ 0.09
HDDC2-209ENST00000609477 PABPC5Q96DU9 382 aaKnown RBP15.61■□□□□ 0.09
HDDC2-209ENST00000609477 CCDC34Q96HJ3 373 aa15.61■□□□□ 0.09
HDDC2-209ENST00000609477 TMEM206Q9H813 350 aa15.61■□□□□ 0.09
HDDC2-209ENST00000609477 KLK14Q9P0G3 267 aa15.61■□□□□ 0.09
HDDC2-209ENST00000609477 ANKFY1Q9P2R3 1169 aa15.61■□□□□ 0.09
HDDC2-209ENST00000609477 SSX2IPQ9Y2D8 614 aa15.61■□□□□ 0.09
HDDC2-209ENST00000609477 STYXL1Q9Y6J8 313 aa15.61■□□□□ 0.09
HDDC2-209ENST00000609477 A0A0B4J269 797 aa15.6■□□□□ 0.09
HDDC2-209ENST00000609477 A0A1B0GVL5 298 aa15.6■□□□□ 0.09
HDDC2-209ENST00000609477 NT5C1B-RDH14C9J2C7 533 aa15.6■□□□□ 0.09
HDDC2-209ENST00000609477 PTGESO14684 152 aa15.6■□□□□ 0.09
HDDC2-209ENST00000609477 CLTAP09496 248 aa15.6■□□□□ 0.09
HDDC2-209ENST00000609477 KCNE1P15382 129 aa15.6■□□□□ 0.09
HDDC2-209ENST00000609477 PBX3P40426 434 aa15.6■□□□□ 0.09
HDDC2-209ENST00000609477 MATR3P43243 847 aaKnown RBP eCLIP15.6■□□□□ 0.091e-7■■■■□ 19.4
HDDC2-209ENST00000609477 SYKP43405 635 aa15.6■□□□□ 0.09
HDDC2-209ENST00000609477 OR1G1P47890 313 aa15.6■□□□□ 0.09
HDDC2-209ENST00000609477 ERVFC1P60507 584 aa15.6■□□□□ 0.09
HDDC2-209ENST00000609477 ASIC1P78348 528 aa15.6■□□□□ 0.09
HDDC2-209ENST00000609477 MRPS5P82675 430 aaKnown RBP15.6■□□□□ 0.09
HDDC2-209ENST00000609477 SMC1AQ14683 1233 aaKnown RBP15.6■□□□□ 0.09
HDDC2-209ENST00000609477 L1TD1Q5T7N2 865 aaKnown RBP15.6■□□□□ 0.09
HDDC2-209ENST00000609477 UNC13DQ70J99 1090 aa15.6■□□□□ 0.09
HDDC2-209ENST00000609477 TMC7Q7Z402 723 aa15.6■□□□□ 0.09
HDDC2-209ENST00000609477 ZBTB33Q86T24 672 aa15.6■□□□□ 0.09
HDDC2-209ENST00000609477 CD302Q8IX05 232 aa15.6■□□□□ 0.09
HDDC2-209ENST00000609477 GPR65Q8IYL9 337 aa15.6■□□□□ 0.09
HDDC2-209ENST00000609477 ZBTB45Q96K62 511 aaPredicted RBP15.6■□□□□ 0.09
HDDC2-209ENST00000609477 UROC1Q96N76 676 aa15.6■□□□□ 0.09
HDDC2-209ENST00000609477 PPP1R10Q96QC0 940 aaKnown RBP15.6■□□□□ 0.09
HDDC2-209ENST00000609477 ACCSQ96QU6 501 aa15.6■□□□□ 0.09
HDDC2-209ENST00000609477 TCF25Q9BQ70 676 aa15.6■□□□□ 0.09
HDDC2-209ENST00000609477 ENTPD7Q9NQZ7 604 aa15.6■□□□□ 0.09
HDDC2-209ENST00000609477 CNTN3Q9P232 1028 aa15.6■□□□□ 0.09
HDDC2-209ENST00000609477 ATG2AQ2TAZ0 1938 aa15.6■□□□□ 0.09
HDDC2-209ENST00000609477 SMIM28A0A1B0GU29 152 aa15.59■□□□□ 0.09
HDDC2-209ENST00000609477 OGTO15294 1046 aa15.59■□□□□ 0.09
HDDC2-209ENST00000609477 EIF3DO15371 548 aaKnown RBP eCLIP15.59■□□□□ 0.09
HDDC2-209ENST00000609477 ACTN4O43707 911 aaKnown RBP15.59■□□□□ 0.09
HDDC2-209ENST00000609477 B4GALT3O60512 393 aa15.59■□□□□ 0.09
HDDC2-209ENST00000609477 GCNT3O95395 438 aa15.59■□□□□ 0.09
HDDC2-209ENST00000609477 CTSAP10619 480 aa15.59■□□□□ 0.09
HDDC2-209ENST00000609477 IRS1P35568 1242 aa15.59■□□□□ 0.09
HDDC2-209ENST00000609477 COASYQ13057 564 aa15.59■□□□□ 0.09
HDDC2-209ENST00000609477 NAB2Q15742 525 aa15.59■□□□□ 0.09
HDDC2-209ENST00000609477 CTC1Q2NKJ3 1217 aa15.59■□□□□ 0.09
HDDC2-209ENST00000609477 ZC2HC1CQ53FD0 456 aaPredicted RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms