RNA–Protein interactions for RNA: ENST00000609081.1

LMBR1-220, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-220ENST00000609081 CCDC94Q9BW85 323 aaPredicted RBP16.58■□□□□ 0.24
LMBR1-220ENST00000609081 PTPRHQ9HD43 1115 aa16.58■□□□□ 0.24
LMBR1-220ENST00000609081 MARCH5Q9NX47 278 aa16.58■□□□□ 0.24
LMBR1-220ENST00000609081 STK17AQ9UEE5 414 aa16.58■□□□□ 0.24
LMBR1-220ENST00000609081 DPP7Q9UHL4 492 aa16.58■□□□□ 0.24
LMBR1-220ENST00000609081 PRG3Q9Y2Y8 225 aaPredicted RBP16.58■□□□□ 0.24
LMBR1-220ENST00000609081 USP15Q9Y4E8 981 aaPredicted RBP16.58■□□□□ 0.24
LMBR1-220ENST00000609081 CLIC4Q9Y696 253 aa16.58■□□□□ 0.24
LMBR1-220ENST00000609081 CITO14578 2027 aa16.57■□□□□ 0.24
LMBR1-220ENST00000609081 SF3B1O75533 1304 aaKnown RBP eCLIP16.57■□□□□ 0.24
LMBR1-220ENST00000609081 SLC16A4O15374 487 aa16.57■□□□□ 0.24
LMBR1-220ENST00000609081 EDN1P05305 212 aa16.57■□□□□ 0.24
LMBR1-220ENST00000609081 ALADP13716 330 aa16.57■□□□□ 0.24
LMBR1-220ENST00000609081 PLCG1P19174 1290 aa16.57■□□□□ 0.24
LMBR1-220ENST00000609081 DDIT3P35638 169 aa16.57■□□□□ 0.24
LMBR1-220ENST00000609081 GRM5P41594 1212 aa16.57■□□□□ 0.24
LMBR1-220ENST00000609081 GLUD2P49448 558 aa16.57■□□□□ 0.24
LMBR1-220ENST00000609081 CREMQ03060 361 aa16.57■□□□□ 0.24
LMBR1-220ENST00000609081 ELAVL2Q12926 359 aaKnown RBP16.57■□□□□ 0.24
LMBR1-220ENST00000609081 SLC39A14Q15043 492 aa16.57■□□□□ 0.24
LMBR1-220ENST00000609081 ZNF568Q3ZCX4 644 aa16.57■□□□□ 0.24
LMBR1-220ENST00000609081 EEF1DP3Q658K8 133 aa16.57■□□□□ 0.24
LMBR1-220ENST00000609081 CES5AQ6NT32 575 aa16.57■□□□□ 0.24
LMBR1-220ENST00000609081 GPBP1Q86WP2 473 aa16.57■□□□□ 0.24
LMBR1-220ENST00000609081 TMEM161BQ8NDZ6 487 aa16.57■□□□□ 0.24
LMBR1-220ENST00000609081 SUSD6Q92537 303 aa16.57■□□□□ 0.24
LMBR1-220ENST00000609081 LARP4BQ92615 738 aaKnown RBP16.57■□□□□ 0.24
LMBR1-220ENST00000609081 NECTIN4Q96NY8 510 aa16.57■□□□□ 0.24
LMBR1-220ENST00000609081 VN1R3Q9BXE9 311 aa16.57■□□□□ 0.24
LMBR1-220ENST00000609081 PARVGQ9HBI0 331 aa16.57■□□□□ 0.24
LMBR1-220ENST00000609081 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.57■□□□□ 0.24
LMBR1-220ENST00000609081 BLOC1S4Q9NUP1 217 aa16.57■□□□□ 0.24
LMBR1-220ENST00000609081 KLK14Q9P0G3 267 aa16.57■□□□□ 0.24
LMBR1-220ENST00000609081 FBXO2Q9UK22 296 aaPredicted RBP16.57■□□□□ 0.24
LMBR1-220ENST00000609081 ADAM28Q9UKQ2 775 aa16.57■□□□□ 0.24
LMBR1-220ENST00000609081 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.57■□□□□ 0.24
LMBR1-220ENST00000609081 SFI1A8K8P3 1242 aa16.56■□□□□ 0.24
LMBR1-220ENST00000609081 LILRB3O75022 631 aa16.56■□□□□ 0.24
LMBR1-220ENST00000609081 TOM1L1O75674 476 aa16.56■□□□□ 0.24
LMBR1-220ENST00000609081 ADH1AP07327 375 aa16.56■□□□□ 0.24
LMBR1-220ENST00000609081 MAPTP10636 758 aaKnown RBP16.56■□□□□ 0.24
LMBR1-220ENST00000609081 PROZP22891 400 aa16.56■□□□□ 0.24
LMBR1-220ENST00000609081 ZNF131P52739 623 aa16.56■□□□□ 0.24
LMBR1-220ENST00000609081 NCKAP1LP55160 1127 aa16.56■□□□□ 0.24
LMBR1-220ENST00000609081 DSG1Q02413 1049 aa16.56■□□□□ 0.24
LMBR1-220ENST00000609081 HSP90AA2PQ14568 343 aaPredicted RBP16.56■□□□□ 0.24
LMBR1-220ENST00000609081 KARSQ15046 597 aaKnown RBP16.56■□□□□ 0.24
LMBR1-220ENST00000609081 USP41Q3LFD5 358 aa16.56■□□□□ 0.24
LMBR1-220ENST00000609081 ARSHQ5FYA8 562 aa16.56■□□□□ 0.24
LMBR1-220ENST00000609081 KIAA1841Q6NSI8 718 aa16.56■□□□□ 0.24
LMBR1-220ENST00000609081 LLGL2Q6P1M3 1020 aa16.56■□□□□ 0.24
LMBR1-220ENST00000609081 SYCE2Q6PIF2 218 aa16.56■□□□□ 0.24
LMBR1-220ENST00000609081 MPZL3Q6UWV2 235 aa16.56■□□□□ 0.24
LMBR1-220ENST00000609081 TAS1R3Q7RTX0 852 aa16.56■□□□□ 0.24
LMBR1-220ENST00000609081 KRI1Q8N9T8 703 aaKnown RBP16.56■□□□□ 0.24
LMBR1-220ENST00000609081 UROC1Q96N76 676 aa16.56■□□□□ 0.24
LMBR1-220ENST00000609081 ZNF396Q96N95 335 aaPredicted RBP16.56■□□□□ 0.24
LMBR1-220ENST00000609081 REEP2Q9BRK0 252 aa16.56■□□□□ 0.24
LMBR1-220ENST00000609081 TCHPQ9BT92 498 aa16.56■□□□□ 0.24
LMBR1-220ENST00000609081 PHF7Q9BWX1 381 aaPredicted RBP16.56■□□□□ 0.24
LMBR1-220ENST00000609081 CDT1Q9H211 546 aa16.56■□□□□ 0.24
LMBR1-220ENST00000609081 S1PR5Q9H228 398 aa16.56■□□□□ 0.24
LMBR1-220ENST00000609081 TRIP11Q15643 1979 aa16.56■□□□□ 0.24
LMBR1-220ENST00000609081 MYH15Q9Y2K3 1946 aa16.56■□□□□ 0.24
LMBR1-220ENST00000609081 PI4K2BG5E9Z4 385 aa16.55■□□□□ 0.24
LMBR1-220ENST00000609081 PTGESO14684 152 aa16.55■□□□□ 0.24
LMBR1-220ENST00000609081 TBCAO75347 108 aaKnown RBP16.55■□□□□ 0.24
LMBR1-220ENST00000609081 TADA2AO75478 443 aa16.55■□□□□ 0.24
LMBR1-220ENST00000609081 FAM13AO94988 1023 aa16.55■□□□□ 0.24
LMBR1-220ENST00000609081 KRT18P05783 430 aaKnown RBP16.55■□□□□ 0.24
LMBR1-220ENST00000609081 KLRC2P26717 231 aa16.55■□□□□ 0.24
LMBR1-220ENST00000609081 MARCKSP29966 332 aaPredicted RBP16.55■□□□□ 0.24
LMBR1-220ENST00000609081 NASPP49321 788 aaPredicted RBP16.55■□□□□ 0.24
LMBR1-220ENST00000609081 RBM10P98175 930 aaKnown RBP16.55■□□□□ 0.24
LMBR1-220ENST00000609081 GRIN1Q05586 938 aa16.55■□□□□ 0.24
LMBR1-220ENST00000609081 RAD51AP2Q09MP3 1159 aa16.55■□□□□ 0.24
LMBR1-220ENST00000609081 CBX2Q14781 532 aaPredicted RBP16.55■□□□□ 0.24
LMBR1-220ENST00000609081 KYAT1Q16773 422 aa16.55■□□□□ 0.24
LMBR1-220ENST00000609081 FUT10Q6P4F1 479 aa16.55■□□□□ 0.24
LMBR1-220ENST00000609081 PDXDC1Q6P996 788 aa16.55■□□□□ 0.24
LMBR1-220ENST00000609081 SLC22A17Q8WUG5 538 aa16.55■□□□□ 0.24
LMBR1-220ENST00000609081 AUTS2Q8WXX7 1259 aa16.55■□□□□ 0.24
LMBR1-220ENST00000609081 KLHL5Q96PQ7 755 aa16.55■□□□□ 0.24
LMBR1-220ENST00000609081 TARS2Q9BW92 718 aaKnown RBP16.55■□□□□ 0.24
LMBR1-220ENST00000609081 ADAM7Q9H2U9 754 aa16.55■□□□□ 0.24
LMBR1-220ENST00000609081 RXFP1Q9HBX9 757 aa16.55■□□□□ 0.24
LMBR1-220ENST00000609081 CD320Q9NPF0 282 aa16.55■□□□□ 0.24
LMBR1-220ENST00000609081 CHST7Q9NS84 486 aa16.55■□□□□ 0.24
LMBR1-220ENST00000609081 FOXD4L1Q9NU39 408 aa16.55■□□□□ 0.24
LMBR1-220ENST00000609081 SLC38A7Q9NVC3 462 aa16.55■□□□□ 0.24
LMBR1-220ENST00000609081 GDAQ9Y2T3 454 aa16.55■□□□□ 0.24
LMBR1-220ENST00000609081 TMEM189-UBE2V1I3L0A0 370 aa16.54■□□□□ 0.24
LMBR1-220ENST00000609081 CLDN3O15551 220 aa16.54■□□□□ 0.24
LMBR1-220ENST00000609081 CNPP09543 421 aaKnown RBP16.54■□□□□ 0.24
LMBR1-220ENST00000609081 MTHFRP42898 656 aa16.54■□□□□ 0.24
LMBR1-220ENST00000609081 CLCN4P51793 760 aa16.54■□□□□ 0.24
LMBR1-220ENST00000609081 MCM6Q14566 821 aa16.54■□□□□ 0.24
LMBR1-220ENST00000609081 NOLC1Q14978 699 aaKnown RBP eCLIP16.54■□□□□ 0.24
LMBR1-220ENST00000609081 NAB2Q15742 525 aa16.54■□□□□ 0.24
LMBR1-220ENST00000609081 XKR4Q5GH76 650 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms