RNA–Protein interactions for RNA: ENST00000608657.5

ITGB5-212, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-212ENST00000608657 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.67□□□□□ -0.86
ITGB5-212ENST00000608657 BICDL2A1A5D9 508 aa9.67□□□□□ -0.86
ITGB5-212ENST00000608657 PPP1R3GB7ZBB8 358 aa9.67□□□□□ -0.86
ITGB5-212ENST00000608657 C9IYK1 514 aa9.67□□□□□ -0.86
ITGB5-212ENST00000608657 ABLIM1O14639 778 aa9.67□□□□□ -0.86
ITGB5-212ENST00000608657 KIAA0391O15091 583 aaKnown RBP9.67□□□□□ -0.86
ITGB5-212ENST00000608657 CLIC2O15247 247 aa9.67□□□□□ -0.86
ITGB5-212ENST00000608657 TGFB1I1O43294 461 aa9.67□□□□□ -0.86
ITGB5-212ENST00000608657 LDHAP00338 332 aaKnown RBP9.67□□□□□ -0.86
ITGB5-212ENST00000608657 STAG3L1P0CL83 205 aa9.67□□□□□ -0.86
ITGB5-212ENST00000608657 CD44P16070 742 aaKnown RBP9.67□□□□□ -0.86
ITGB5-212ENST00000608657 GARTP22102 1010 aa9.67□□□□□ -0.86
ITGB5-212ENST00000608657 CCNE1P24864 410 aa9.67□□□□□ -0.86
ITGB5-212ENST00000608657 MCL1Q07820 350 aa9.67□□□□□ -0.86
ITGB5-212ENST00000608657 PAK1Q13153 545 aa9.67□□□□□ -0.86
ITGB5-212ENST00000608657 TPD52L1Q16890 204 aaPredicted RBP9.67□□□□□ -0.86
ITGB5-212ENST00000608657 DPCR1Q3MIW9 517 aa9.67□□□□□ -0.86
ITGB5-212ENST00000608657 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.67□□□□□ -0.86
ITGB5-212ENST00000608657 C11orf57Q6ZUT1 292 aaPredicted RBP9.67□□□□□ -0.86
ITGB5-212ENST00000608657 ECHDC2Q86YB7 292 aa9.67□□□□□ -0.86
ITGB5-212ENST00000608657 LRRC8AQ8IWT6 810 aa9.67□□□□□ -0.86
ITGB5-212ENST00000608657 THNSL1Q8IYQ7 743 aa9.67□□□□□ -0.86
ITGB5-212ENST00000608657 ANKRD20A12PQ8NF67 263 aa9.67□□□□□ -0.86
ITGB5-212ENST00000608657 NOC3LQ8WTT2 800 aaKnown RBP9.67□□□□□ -0.86
ITGB5-212ENST00000608657 NELFBQ8WX92 580 aa9.67□□□□□ -0.86
ITGB5-212ENST00000608657 HERVK_113Q902F9 699 aa9.67□□□□□ -0.86
ITGB5-212ENST00000608657 P2RX5Q93086 422 aa9.67□□□□□ -0.86
ITGB5-212ENST00000608657 PGBD4Q96DM1 585 aa9.67□□□□□ -0.86
ITGB5-212ENST00000608657 RNPC3Q96LT9 517 aaKnown RBP9.67□□□□□ -0.86
ITGB5-212ENST00000608657 SLC9A7Q96T83 725 aa9.67□□□□□ -0.86
ITGB5-212ENST00000608657 CBWD1Q9BRT8 395 aa9.67□□□□□ -0.86
ITGB5-212ENST00000608657 TRAIPQ9BWF2 469 aa9.67□□□□□ -0.86
ITGB5-212ENST00000608657 APOL6Q9BWW8 343 aa9.67□□□□□ -0.86
ITGB5-212ENST00000608657 KCTD10Q9H3F6 313 aa9.67□□□□□ -0.86
ITGB5-212ENST00000608657 NXF3Q9H4D5 531 aaKnown RBP9.67□□□□□ -0.86
ITGB5-212ENST00000608657 AGPAT3Q9NRZ7 376 aa9.67□□□□□ -0.86
ITGB5-212ENST00000608657 TMEM161AQ9NX61 479 aa9.67□□□□□ -0.86
ITGB5-212ENST00000608657 AGO2Q9UKV8 859 aaKnown RBP9.67□□□□□ -0.86
ITGB5-212ENST00000608657 IPPQ9Y573 584 aa9.67□□□□□ -0.86
ITGB5-212ENST00000608657 PCDHB2Q9Y5E7 798 aa9.67□□□□□ -0.86
ITGB5-212ENST00000608657 STYXL1Q9Y6J8 313 aa9.67□□□□□ -0.86
ITGB5-212ENST00000608657 SLC4A7Q9Y6M7 1214 aa9.67□□□□□ -0.86
ITGB5-212ENST00000608657 PDCD11Q14690 1871 aaKnown RBP9.67□□□□□ -0.86
ITGB5-212ENST00000608657 CEP290O15078 2479 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 TRIP11Q15643 1979 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 ANK1P16157 1881 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 FNDC1Q4ZHG4 1894 aaPredicted RBP9.66□□□□□ -0.86
ITGB5-212ENST00000608657 GBF1Q92538 1859 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 A0A0B4J269 797 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 TRIM49BA6NDI0 452 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 OGTO15294 1046 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 ZNF623O75123 536 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 UPP2O95045 317 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 EOMESO95936 686 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 SERPINC1P01008 464 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 NR3C1P04150 777 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 TPM1P09493 284 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 ITGA4P13612 1032 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 NR2F2P24468 414 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 ERCC5P28715 1186 aaPredicted RBP9.66□□□□□ -0.86
ITGB5-212ENST00000608657 ADSSP30520 456 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 GRM5P41594 1212 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 CYP2J2P51589 502 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 YARSP54577 528 aaKnown RBP9.66□□□□□ -0.86
ITGB5-212ENST00000608657 OSTNP61366 133 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 DEFB103AP81534 67 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 LRRC63Q05C16 580 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 KYAT1Q16773 422 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 C9orf50Q5SZB4 431 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 NPAS4Q8IUM7 802 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 GPD1LQ8N335 351 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 CEP120Q8N960 986 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 SMG8Q8ND04 991 aaKnown RBP9.66□□□□□ -0.86
ITGB5-212ENST00000608657 LPPQ93052 612 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 SAAL1Q96ER3 474 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 CCDC94Q9BW85 323 aaPredicted RBP9.66□□□□□ -0.86
ITGB5-212ENST00000608657 HAPLN2Q9GZV7 340 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 SEMA6BQ9H3T3 888 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 PCIF1Q9H4Z3 704 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 ELAC1Q9H777 363 aaKnown RBP9.66□□□□□ -0.86
ITGB5-212ENST00000608657 SNTG2Q9NY99 539 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 HSPBP1Q9NZL4 362 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 CXXC1Q9P0U4 656 aaPredicted RBP9.66□□□□□ -0.86
ITGB5-212ENST00000608657 PARP2Q9UGN5 583 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 TRAF3IP3Q9Y228 551 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 PCDHB7Q9Y5E2 793 aa9.66□□□□□ -0.86
ITGB5-212ENST00000608657 GOLGA8IPA6NC78 632 aa9.65□□□□□ -0.86
ITGB5-212ENST00000608657 GOLGA8JA6NMD2 632 aa9.65□□□□□ -0.86
ITGB5-212ENST00000608657 ZSCAN12O43309 604 aa9.65□□□□□ -0.86
ITGB5-212ENST00000608657 HOXA2O43364 376 aa9.65□□□□□ -0.86
ITGB5-212ENST00000608657 EXTL3O43909 919 aa9.65□□□□□ -0.86
ITGB5-212ENST00000608657 EXOC3O60645 756 aa9.65□□□□□ -0.86
ITGB5-212ENST00000608657 SKILP12757 684 aa9.65□□□□□ -0.86
ITGB5-212ENST00000608657 ATF7P17544 494 aaPredicted RBP9.65□□□□□ -0.86
ITGB5-212ENST00000608657 AKAP5P24588 427 aa9.65□□□□□ -0.86
ITGB5-212ENST00000608657 RPL13P26373 211 aaKnown RBP9.65□□□□□ -0.86
ITGB5-212ENST00000608657 STX17P56962 302 aa9.65□□□□□ -0.86
ITGB5-212ENST00000608657 FAM189BP81408 668 aa9.65□□□□□ -0.86
ITGB5-212ENST00000608657 SHHQ15465 462 aa9.65□□□□□ -0.86
ITGB5-212ENST00000608657 PTPN14Q15678 1187 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms