RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 ZNF707Q96C28 371 aaPredicted RBP14.8□□□□□ -0.04
POLR2J3-219ENST00000608621 MYADMQ96S97 322 aa14.8□□□□□ -0.04
POLR2J3-219ENST00000608621 PIDD1Q9HB75 910 aa14.8□□□□□ -0.04
POLR2J3-219ENST00000608621 POLD4Q9HCU8 107 aa14.8□□□□□ -0.04
POLR2J3-219ENST00000608621 FBXL21Q9UKT6 434 aa14.8□□□□□ -0.04
POLR2J3-219ENST00000608621 DUSP12Q9UNI6 340 aa14.8□□□□□ -0.04
POLR2J3-219ENST00000608621 USP20Q9Y2K6 914 aa14.8□□□□□ -0.04
POLR2J3-219ENST00000608621 MTCL1Q9Y4B5 1905 aaKnown RBP14.8□□□□□ -0.04
POLR2J3-219ENST00000608621 CASTOR2A6NHX0 329 aa14.79□□□□□ -0.04
POLR2J3-219ENST00000608621 N4BP3O15049 544 aa14.79□□□□□ -0.04
POLR2J3-219ENST00000608621 NARSO43776 548 aaKnown RBP14.79□□□□□ -0.04
POLR2J3-219ENST00000608621 CLUHO75153 1309 aa14.79□□□□□ -0.04
POLR2J3-219ENST00000608621 C1RP00736 705 aa14.79□□□□□ -0.04
POLR2J3-219ENST00000608621 LIG1P18858 919 aa14.79□□□□□ -0.04
POLR2J3-219ENST00000608621 CYP11B2P19099 503 aa14.79□□□□□ -0.04
POLR2J3-219ENST00000608621 RPA1P27694 616 aa14.79□□□□□ -0.04
POLR2J3-219ENST00000608621 TUSC3Q13454 348 aa14.79□□□□□ -0.04
POLR2J3-219ENST00000608621 PRPF4BQ13523 1007 aaKnown RBP14.79□□□□□ -0.04
POLR2J3-219ENST00000608621 TMEM132AQ24JP5 1023 aa14.79□□□□□ -0.04
POLR2J3-219ENST00000608621 POTEGQ6S5H5 508 aa14.79□□□□□ -0.04
POLR2J3-219ENST00000608621 NOSTRINQ8IVI9 506 aa14.79□□□□□ -0.04
POLR2J3-219ENST00000608621 CCDC83Q8IWF9 413 aa14.79□□□□□ -0.04
POLR2J3-219ENST00000608621 ERMNQ8TAM6 284 aa14.79□□□□□ -0.04
POLR2J3-219ENST00000608621 C8orf76Q96K31 380 aa14.79□□□□□ -0.04
POLR2J3-219ENST00000608621 C2orf40Q9H1Z8 148 aa14.79□□□□□ -0.04
POLR2J3-219ENST00000608621 CXCL16Q9H2A7 254 aa14.79□□□□□ -0.04
POLR2J3-219ENST00000608621 PDZD7Q9H5P4 517 aa14.79□□□□□ -0.04
POLR2J3-219ENST00000608621 LIMCH1Q9UPQ0 1083 aa14.79□□□□□ -0.04
POLR2J3-219ENST00000608621 ZMYM2Q9UBW7 1377 aa14.78□□□□□ -0.04
POLR2J3-219ENST00000608621 ARHGEF35A5YM69 484 aa14.78□□□□□ -0.04
POLR2J3-219ENST00000608621 ACKR2O00590 384 aa14.78□□□□□ -0.04
POLR2J3-219ENST00000608621 PTGESO14684 152 aa14.78□□□□□ -0.04
POLR2J3-219ENST00000608621 EIF5BO60841 1220 aaKnown RBP14.78□□□□□ -0.04
POLR2J3-219ENST00000608621 PAPLNO95428 1278 aa14.78□□□□□ -0.04
POLR2J3-219ENST00000608621 PRKCBP05771 671 aa14.78□□□□□ -0.04
POLR2J3-219ENST00000608621 THP07101 528 aa14.78□□□□□ -0.04
POLR2J3-219ENST00000608621 OR52Z1P0C646 297 aa14.78□□□□□ -0.04
POLR2J3-219ENST00000608621 MAPK6Q16659 721 aa14.78□□□□□ -0.04
POLR2J3-219ENST00000608621 RTP2Q5QGT7 225 aa14.78□□□□□ -0.04
POLR2J3-219ENST00000608621 CWF19L1Q69YN2 538 aaKnown RBP14.78□□□□□ -0.04
POLR2J3-219ENST00000608621 CEP57Q86XR8 500 aa14.78□□□□□ -0.04
POLR2J3-219ENST00000608621 SIX5Q8N196 739 aa14.78□□□□□ -0.04
POLR2J3-219ENST00000608621 SLC44A3Q8N4M1 653 aa14.78□□□□□ -0.04
POLR2J3-219ENST00000608621 HASPINQ8TF76 798 aa14.78□□□□□ -0.04
POLR2J3-219ENST00000608621 PRKD2Q9BZL6 878 aa14.78□□□□□ -0.04
POLR2J3-219ENST00000608621 FOXP1Q9H334 677 aaPredicted RBP14.78□□□□□ -0.04
POLR2J3-219ENST00000608621 ZDHHC7Q9NXF8 308 aa14.78□□□□□ -0.04
POLR2J3-219ENST00000608621 EPS15L1Q9UBC2 864 aa14.78□□□□□ -0.04
POLR2J3-219ENST00000608621 SF3B1O75533 1304 aaKnown RBP eCLIP14.77□□□□□ -0.04
POLR2J3-219ENST00000608621 PROB1E7EW31 1015 aa14.77□□□□□ -0.05
POLR2J3-219ENST00000608621 ZMYND10O75800 440 aa14.77□□□□□ -0.05
POLR2J3-219ENST00000608621 RECQL4O94761 1208 aa14.77□□□□□ -0.05
POLR2J3-219ENST00000608621 EDN1P05305 212 aa14.77□□□□□ -0.05
POLR2J3-219ENST00000608621 CFHP08603 1231 aa14.77□□□□□ -0.05
POLR2J3-219ENST00000608621 AOC1P19801 751 aa14.77□□□□□ -0.05
POLR2J3-219ENST00000608621 NAMPTP43490 491 aa14.77□□□□□ -0.05
POLR2J3-219ENST00000608621 CREMQ03060 361 aa14.77□□□□□ -0.05
POLR2J3-219ENST00000608621 ORC2Q13416 577 aaPredicted RBP14.77□□□□□ -0.05
POLR2J3-219ENST00000608621 NAB2Q15742 525 aa14.77□□□□□ -0.05
POLR2J3-219ENST00000608621 ECM1Q16610 540 aa14.77□□□□□ -0.05
POLR2J3-219ENST00000608621 TTC38Q5R3I4 469 aa14.77□□□□□ -0.05
POLR2J3-219ENST00000608621 FAM171A1Q5VUB5 890 aa14.77□□□□□ -0.05
POLR2J3-219ENST00000608621 EEF1DP3Q658K8 133 aa14.77□□□□□ -0.05
POLR2J3-219ENST00000608621 DEPTORQ8TB45 409 aa14.77□□□□□ -0.05
POLR2J3-219ENST00000608621 LNX1Q8TBB1 728 aaPredicted RBP14.77□□□□□ -0.05
POLR2J3-219ENST00000608621 RTP3Q9BQQ7 232 aa14.77□□□□□ -0.05
POLR2J3-219ENST00000608621 CLSTN3Q9BQT9 956 aa14.77□□□□□ -0.05
POLR2J3-219ENST00000608621 ADPGKQ9BRR6 497 aa14.77□□□□□ -0.05
POLR2J3-219ENST00000608621 LLPHQ9BRT6 129 aaKnown RBP14.77□□□□□ -0.05
POLR2J3-219ENST00000608621 TTPALQ9BTX7 342 aa14.77□□□□□ -0.05
POLR2J3-219ENST00000608621 CCDC113Q9H0I3 377 aa14.77□□□□□ -0.05
POLR2J3-219ENST00000608621 WNT16Q9UBV4 365 aa14.77□□□□□ -0.05
POLR2J3-219ENST00000608621 GDAQ9Y2T3 454 aa14.77□□□□□ -0.05
POLR2J3-219ENST00000608621 STK25O00506 426 aa14.76□□□□□ -0.05
POLR2J3-219ENST00000608621 KIF4AO95239 1232 aa14.76□□□□□ -0.05
POLR2J3-219ENST00000608621 LAMP2P13473 410 aa14.76□□□□□ -0.05
POLR2J3-219ENST00000608621 MUTP22033 750 aa14.76□□□□□ -0.05
POLR2J3-219ENST00000608621 CCT6AP40227 531 aaKnown RBP14.76□□□□□ -0.05
POLR2J3-219ENST00000608621 NBL1P41271 181 aa14.76□□□□□ -0.05
POLR2J3-219ENST00000608621 GNL2Q13823 731 aaKnown RBP14.76□□□□□ -0.05
POLR2J3-219ENST00000608621 PPP2R5AQ15172 486 aa14.76□□□□□ -0.05
POLR2J3-219ENST00000608621 ASCL5Q7RTU5 278 aa14.76□□□□□ -0.05
POLR2J3-219ENST00000608621 C4orf32Q8N8J7 132 aa14.76□□□□□ -0.05
POLR2J3-219ENST00000608621 FBXO18Q8NFZ0 1043 aa14.76□□□□□ -0.05
POLR2J3-219ENST00000608621 PIK3R5Q8WYR1 880 aa14.76□□□□□ -0.05
POLR2J3-219ENST00000608621 NXPE3Q969Y0 559 aa14.76□□□□□ -0.05
POLR2J3-219ENST00000608621 IFT74Q96LB3 600 aa14.76□□□□□ -0.05
POLR2J3-219ENST00000608621 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.76□□□□□ -0.05
POLR2J3-219ENST00000608621 DOCK8Q8NF50 2099 aa14.76□□□□□ -0.05
POLR2J3-219ENST00000608621 PTPRZ1P23471 2315 aaPredicted RBP14.76□□□□□ -0.05
POLR2J3-219ENST00000608621 USP34Q70CQ2 3546 aa14.75□□□□□ -0.05
POLR2J3-219ENST00000608621 DOCK6Q96HP0 2047 aa14.75□□□□□ -0.05
POLR2J3-219ENST00000608621 KRBA1A5PL33 1030 aa14.75□□□□□ -0.05
POLR2J3-219ENST00000608621 IGFBP6P24592 240 aaPredicted RBP14.75□□□□□ -0.05
POLR2J3-219ENST00000608621 RBM25P49756 843 aaKnown RBP14.75□□□□□ -0.05
POLR2J3-219ENST00000608621 PSMD5Q16401 504 aa14.75□□□□□ -0.05
POLR2J3-219ENST00000608621 NT5DC1Q5TFE4 455 aa14.75□□□□□ -0.05
POLR2J3-219ENST00000608621 ERICH6BQ5W0A0 696 aa14.75□□□□□ -0.05
POLR2J3-219ENST00000608621 GET4Q7L5D6 327 aaPredicted RBP14.75□□□□□ -0.05
POLR2J3-219ENST00000608621 ST13P5Q8NFI4 369 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms