RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 STK25O00506 426 aa15.05■□□□□ -0
CTSA-218ENST00000607814 GAS2O43903 313 aaKnown RBP15.05■□□□□ -0
CTSA-218ENST00000607814 TSPAN1O60635 241 aa15.05■□□□□ -0
CTSA-218ENST00000607814 SRFP11831 508 aa15.05■□□□□ -0
CTSA-218ENST00000607814 CYP11B2P19099 503 aa15.05■□□□□ -0
CTSA-218ENST00000607814 RFX1P22670 979 aa15.05■□□□□ -0
CTSA-218ENST00000607814 KLRC2P26717 231 aa15.05■□□□□ -0
CTSA-218ENST00000607814 MBTD1Q05BQ5 628 aa15.05■□□□□ -0
CTSA-218ENST00000607814 MXD4Q14582 209 aaPredicted RBP15.05■□□□□ -0
CTSA-218ENST00000607814 SF3A1Q15459 793 aaKnown RBP15.05■□□□□ -0
CTSA-218ENST00000607814 NOMO2Q5JPE7 1267 aa15.05■□□□□ -0
CTSA-218ENST00000607814 ELMSAN1Q6PJG2 1045 aa15.05■□□□□ -0
CTSA-218ENST00000607814 PNMA5Q96PV4 448 aa15.05■□□□□ -0
CTSA-218ENST00000607814 NRDE2Q9H7Z3 1164 aa15.05■□□□□ -0
CTSA-218ENST00000607814 TBC1D13Q9NVG8 400 aa15.05■□□□□ -0
CTSA-218ENST00000607814 EPS15L1Q9UBC2 864 aa15.05■□□□□ -0
CTSA-218ENST00000607814 HES2Q9Y543 173 aa15.05■□□□□ -0
CTSA-218ENST00000607814 PCDHB2Q9Y5E7 798 aa15.05■□□□□ -0
CTSA-218ENST00000607814 FANCMQ8IYD8 2048 aa15.04■□□□□ -0
CTSA-218ENST00000607814 C2orf16Q68DN1 1984 aa15.04■□□□□ -0
CTSA-218ENST00000607814 KRBA1A5PL33 1030 aa15.04■□□□□ -0
CTSA-218ENST00000607814 LAD1O00515 517 aa15.04■□□□□ -0
CTSA-218ENST00000607814 ZNF623O75123 536 aa15.04■□□□□ -0
CTSA-218ENST00000607814 ERLIN2O94905 339 aa15.04■□□□□ -0
CTSA-218ENST00000607814 SSBP05455 408 aaKnown RBP eCLIP15.04■□□□□ -0
CTSA-218ENST00000607814 PRPHP41219 470 aa15.04■□□□□ -0
CTSA-218ENST00000607814 RAB27AP51159 221 aa15.04■□□□□ -0
CTSA-218ENST00000607814 RNASELQ05823 741 aaKnown RBP15.04■□□□□ -0
CTSA-218ENST00000607814 RAD51AP2Q09MP3 1159 aa15.04■□□□□ -0
CTSA-218ENST00000607814 RESTQ13127 1097 aa15.04■□□□□ -0
CTSA-218ENST00000607814 TFDP1Q14186 410 aa15.04■□□□□ -0
CTSA-218ENST00000607814 AMHR2Q16671 573 aa15.04■□□□□ -0
CTSA-218ENST00000607814 SPECC1Q5M775 1068 aa15.04■□□□□ -0
CTSA-218ENST00000607814 KLHL5Q96PQ7 755 aa15.04■□□□□ -0
CTSA-218ENST00000607814 APOL6Q9BWW8 343 aa15.04■□□□□ -0
CTSA-218ENST00000607814 RAB34Q9BZG1 259 aa15.04■□□□□ -0
CTSA-218ENST00000607814 RNF39Q9H2S5 420 aa15.04■□□□□ -0
CTSA-218ENST00000607814 WDR6Q9NNW5 1121 aaKnown RBP15.04■□□□□ -0
CTSA-218ENST00000607814 MTMR6Q9Y217 621 aa15.04■□□□□ -0
CTSA-218ENST00000607814 SFI1A8K8P3 1242 aa15.03■□□□□ -0
CTSA-218ENST00000607814 NARSO43776 548 aaKnown RBP15.03■□□□□ -0
CTSA-218ENST00000607814 LILRB3O75022 631 aa15.03■□□□□ -0
CTSA-218ENST00000607814 OFD1O75665 1012 aa15.03■□□□□ -0
CTSA-218ENST00000607814 CFHP08603 1231 aa15.03■□□□□ -0
CTSA-218ENST00000607814 CNPP09543 421 aaKnown RBP15.03■□□□□ -0
CTSA-218ENST00000607814 ARF4P18085 180 aaPredicted RBP15.03■□□□□ -0
CTSA-218ENST00000607814 SDHBP21912 280 aa15.03■□□□□ -0
CTSA-218ENST00000607814 MARCKSP29966 332 aaPredicted RBP15.03■□□□□ -0
CTSA-218ENST00000607814 C1orf210Q8IVY1 113 aa15.03■□□□□ -0
CTSA-218ENST00000607814 SLC44A3Q8N4M1 653 aa15.03■□□□□ -0
CTSA-218ENST00000607814 SMG8Q8ND04 991 aaKnown RBP15.03■□□□□ -0
CTSA-218ENST00000607814 BCL7CQ8WUZ0 217 aaPredicted RBP15.03■□□□□ -0
CTSA-218ENST00000607814 HINFPQ9BQA5 517 aa15.03■□□□□ -0
CTSA-218ENST00000607814 RUSC1Q9BVN2 902 aa15.03■□□□□ -0
CTSA-218ENST00000607814 VN1R3Q9BXE9 311 aa15.03■□□□□ -0
CTSA-218ENST00000607814 GBP3Q9H0R5 595 aa15.03■□□□□ -0
CTSA-218ENST00000607814 TBC1D17Q9HA65 648 aa15.03■□□□□ -0
CTSA-218ENST00000607814 MRPL17Q9NRX2 175 aaKnown RBP15.03■□□□□ -0
CTSA-218ENST00000607814 DNM3Q9UQ16 869 aa15.03■□□□□ -0
CTSA-218ENST00000607814 SSX2IPQ9Y2D8 614 aa15.03■□□□□ -0
CTSA-218ENST00000607814 R4GN57 208 aa15.03■□□□□ -0
CTSA-218ENST00000607814 NPHP3-ACAD11A0A0J9YXS1 232 aa15.02■□□□□ -0
CTSA-218ENST00000607814 B4GALT3O60512 393 aa15.02■□□□□ -0
CTSA-218ENST00000607814 N4BP1O75113 896 aaKnown RBP15.02■□□□□ -0
CTSA-218ENST00000607814 PAPLNO95428 1278 aa15.02■□□□□ -0
CTSA-218ENST00000607814 C1RP00736 705 aa15.02■□□□□ -0
CTSA-218ENST00000607814 EDN1P05305 212 aa15.02■□□□□ -0
CTSA-218ENST00000607814 PDCP20941 246 aa15.02■□□□□ -0
CTSA-218ENST00000607814 SLC11A1P49279 550 aa15.02■□□□□ -0
CTSA-218ENST00000607814 CACNB1Q02641 598 aaPredicted RBP15.02■□□□□ -0
CTSA-218ENST00000607814 DHX8Q14562 1220 aaKnown RBP15.02■□□□□ -0
CTSA-218ENST00000607814 FOXD4L6Q3SYB3 417 aaPredicted RBP15.02■□□□□ -0
CTSA-218ENST00000607814 FOXD4L3Q6VB84 417 aaPredicted RBP15.02■□□□□ -0
CTSA-218ENST00000607814 AGMOQ6ZNB7 445 aa15.02■□□□□ -0
CTSA-218ENST00000607814 BRAPQ7Z569 592 aa15.02■□□□□ -0
CTSA-218ENST00000607814 ZNF280BQ86YH2 543 aa15.02■□□□□ -0
CTSA-218ENST00000607814 MCPH1Q8NEM0 835 aa15.02■□□□□ -0
CTSA-218ENST00000607814 FEZF2Q8TBJ5 459 aa15.02■□□□□ -0
CTSA-218ENST00000607814 URGCPQ8TCY9 931 aa15.02■□□□□ -0
CTSA-218ENST00000607814 LRRC15Q8TF66 581 aa15.02■□□□□ -0
CTSA-218ENST00000607814 HDAC7Q8WUI4 952 aa15.02■□□□□ -0
CTSA-218ENST00000607814 SNX21Q969T3 373 aa15.02■□□□□ -0
CTSA-218ENST00000607814 PGBD4Q96DM1 585 aa15.02■□□□□ -0
CTSA-218ENST00000607814 INTS4Q96HW7 963 aaKnown RBP15.02■□□□□ -0
CTSA-218ENST00000607814 DLGAP2Q9P1A6 1054 aa15.02■□□□□ -0
CTSA-218ENST00000607814 SIT1Q9Y3P8 196 aa15.02■□□□□ -0
CTSA-218ENST00000607814 CACNA1IQ9P0X4 2223 aa15.02□□□□□ -0.01
CTSA-218ENST00000607814 CHD8Q9HCK8 2581 aa15.02□□□□□ -0.01
CTSA-218ENST00000607814 CLUHO75153 1309 aa15.01□□□□□ -0.01
CTSA-218ENST00000607814 HIP1RO75146 1068 aa15.01□□□□□ -0.01
CTSA-218ENST00000607814 NPTXRO95502 500 aa15.01□□□□□ -0.01
CTSA-218ENST00000607814 POMCP01189 267 aa15.01□□□□□ -0.01
CTSA-218ENST00000607814 ADH1AP07327 375 aa15.01□□□□□ -0.01
CTSA-218ENST00000607814 SP9P0CG40 484 aa15.01□□□□□ -0.01
CTSA-218ENST00000607814 AKAP5P24588 427 aa15.01□□□□□ -0.01
CTSA-218ENST00000607814 GBP2P32456 591 aaPredicted RBP15.01□□□□□ -0.01
CTSA-218ENST00000607814 RINT1Q6NUQ1 792 aa15.01□□□□□ -0.01
CTSA-218ENST00000607814 USP49Q70CQ1 688 aa15.01□□□□□ -0.01
CTSA-218ENST00000607814 IFNLR1Q8IU57 520 aaPredicted RBP15.01□□□□□ -0.01
CTSA-218ENST00000607814 HSCBQ8IWL3 235 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms