RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 STK3Q13188 491 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 SSPNQ14714 243 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 POSTNQ15063 836 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 E2F5Q15329 346 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 GALNTL6Q49A17 601 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 LRRC23Q53EV4 343 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 FIGNQ5HY92 759 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 BEND3Q5T5X7 828 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 ERMARDQ5T6L9 678 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 SLC9C2Q5TAH2 1124 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 CCDC181Q5TID7 509 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 HIBCHQ6NVY1 386 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 CEP128Q6ZU80 1094 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 CROCCP2Q86T23 111 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 RNF10Q8N5U6 811 aaKnown RBP4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 MARCH10Q8NA82 808 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 B4GALNT2Q8NHY0 566 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 NUP133Q8WUM0 1156 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 ATRIPQ8WXE1 791 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 JAKMIP2Q96AA8 810 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 STAMBPL1Q96FJ0 436 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 NAF1Q96HR8 494 aaKnown RBP4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 CCDC74BQ96LY2 380 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 KREMEN1Q96MU8 473 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 ZNF570Q96NI8 536 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 SCLT1Q96NL6 688 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 KCNC2Q96PR1 638 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 SLF1Q9BQI6 1058 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 LRRC1Q9BTT6 524 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 FTOQ9C0B1 505 aaKnown RBP eCLIP4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 CENPHQ9H3R5 247 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 ZWILCHQ9H900 591 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 DMAP1Q9NPF5 467 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 ARHGEF3Q9NR81 526 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 HELLSQ9NRZ9 838 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 SAMSN1Q9NSI8 373 aaKnown RBP4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 ZNHIT6Q9NWK9 470 aaKnown RBP4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 CIDEBQ9UHD4 219 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 DDX25Q9UHL0 483 aaKnown RBP4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 CAPN11Q9UMQ6 739 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 TLR6Q9Y2C9 796 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 NFS1Q9Y697 457 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 AK5Q9Y6K8 562 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 MON2Q7Z3U7 1717 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 DDX60Q8IY21 1712 aaKnown RBP4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 BCL9LQ86UU0 1499 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 LRRC37A3O60309 1634 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 AKAP12Q02952 1782 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 A0A0D9SFI3 127 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 A0A0U1RQJ8 604 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 E7EVH7 732 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 F8W031 263 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 H7C1D1 291 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 RBAK-RBAKDNI3L0D1 243 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 PJA2O43164 708 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 SMIM24O75264 130 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 ATP5HO75947 161 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 CCDC166P0CW27 439 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 GNAT1P11488 350 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 GNAZP19086 355 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 ATP6V1C1P21283 382 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 ALDH3A1P30838 453 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 KRT9P35527 623 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 CYLC1P35663 651 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 ARL4AP40617 200 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 GNAQP50148 359 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 SEC24CP53992 1094 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 EIF3BP55884 814 aaKnown RBP4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 NLRP5P59047 1200 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 PPP2R2AP63151 447 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 MRPS25P82663 173 aaKnown RBP4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 GUCY1A3Q02108 690 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 MYO1EQ12965 1108 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 PABPC4Q13310 644 aaKnown RBP eCLIP4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 PNOCQ13519 176 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 RASA3Q14644 834 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 PPP1R7Q15435 360 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 IMMTQ16891 758 aaKnown RBP4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 SKIDA1Q1XH10 827 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 PARP6Q2NL67 630 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 CCDC178Q5BJE1 867 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 CCDC122Q5T0U0 273 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 HAUS3Q68CZ6 603 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 CCDC129Q6ZRS4 1044 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 TSHZ1Q6ZSZ6 1077 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 PRRT2Q7Z6L0 340 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 LMNTD2Q8IXW0 634 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 SP8Q8IXZ3 490 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 CCDC197Q8NCU1 140 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 ACRBPQ8NEB7 543 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 KLHDC4Q8TBB5 520 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 AGAP11Q8TF27 550 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 TEKT4Q8WW24 435 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 RAPGEF5Q92565 580 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 LRRC45Q96CN5 670 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 ZNF317Q96PQ6 595 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 EDEM3Q9BZQ6 932 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 SIL1Q9H173 461 aa4.43□□□□□ -1.7
HMGB1P50-201ENST00000605814 VCXQ9H320 206 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms