RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 KIAA0825Q8IV33 1275 aa13.29□□□□□ -0.28
CDCA3-212ENST00000604599 CELF1Q92879 486 aaKnown RBP13.29□□□□□ -0.28
CDCA3-212ENST00000604599 TRAPPC9Q96Q05 1148 aa13.29□□□□□ -0.28
CDCA3-212ENST00000604599 DDX50Q9BQ39 737 aaKnown RBP13.29□□□□□ -0.28
CDCA3-212ENST00000604599 OCEL1Q9H607 264 aa13.29□□□□□ -0.28
CDCA3-212ENST00000604599 TYW1Q9NV66 732 aaKnown RBP13.29□□□□□ -0.28
CDCA3-212ENST00000604599 ROBO3Q96MS0 1386 aa13.29□□□□□ -0.28
CDCA3-212ENST00000604599 CAPN9O14815 690 aa13.28□□□□□ -0.28
CDCA3-212ENST00000604599 UBTFL6P0CB48 400 aaPredicted RBP13.28□□□□□ -0.28
CDCA3-212ENST00000604599 PYGBP11216 843 aa13.28□□□□□ -0.28
CDCA3-212ENST00000604599 HIBADHP31937 336 aaKnown RBP13.28□□□□□ -0.28
CDCA3-212ENST00000604599 CBWD6Q4V339 395 aa13.28□□□□□ -0.28
CDCA3-212ENST00000604599 CBWD3Q5JTY5 395 aa13.28□□□□□ -0.28
CDCA3-212ENST00000604599 CBWD5Q5RIA9 395 aa13.28□□□□□ -0.28
CDCA3-212ENST00000604599 C4orf50Q6ZRC1 276 aa13.28□□□□□ -0.28
CDCA3-212ENST00000604599 FAM186BQ8IYM0 893 aa13.28□□□□□ -0.28
CDCA3-212ENST00000604599 RUSC1Q9BVN2 902 aa13.28□□□□□ -0.28
CDCA3-212ENST00000604599 ZFP69BQ9UJL9 534 aa13.28□□□□□ -0.28
CDCA3-212ENST00000604599 SFI1A8K8P3 1242 aa13.28□□□□□ -0.28
CDCA3-212ENST00000604599 TJP3O95049 919 aa13.28□□□□□ -0.28
CDCA3-212ENST00000604599 GGPS1O95749 300 aa13.28□□□□□ -0.28
CDCA3-212ENST00000604599 SGO2Q562F6 1265 aa13.28□□□□□ -0.28
CDCA3-212ENST00000604599 RHBDF2Q6PJF5 856 aa13.28□□□□□ -0.28
CDCA3-212ENST00000604599 NBPF5PQ86XG9 351 aaPredicted RBP13.28□□□□□ -0.28
CDCA3-212ENST00000604599 ZNF526Q8TF50 670 aaPredicted RBP13.28□□□□□ -0.28
CDCA3-212ENST00000604599 GBP5Q96PP8 586 aa13.28□□□□□ -0.28
CDCA3-212ENST00000604599 ADAM33Q9BZ11 813 aa13.28□□□□□ -0.28
CDCA3-212ENST00000604599 GPCPD1Q9NPB8 672 aa13.28□□□□□ -0.28
CDCA3-212ENST00000604599 WHRNQ9P202 907 aa13.28□□□□□ -0.28
CDCA3-212ENST00000604599 GRID1Q9ULK0 1009 aa13.28□□□□□ -0.28
CDCA3-212ENST00000604599 NUMBLQ9Y6R0 609 aa13.28□□□□□ -0.28
CDCA3-212ENST00000604599 SNED1Q8TER0 1413 aa13.28□□□□□ -0.28
CDCA3-212ENST00000604599 ITGB4P16144 1822 aa13.27□□□□□ -0.28
CDCA3-212ENST00000604599 GTPBP10A4D1E9 387 aaKnown RBP13.27□□□□□ -0.28
CDCA3-212ENST00000604599 FOXN3O00409 490 aaPredicted RBP13.27□□□□□ -0.28
CDCA3-212ENST00000604599 ASMTLO95671 621 aa13.27□□□□□ -0.28
CDCA3-212ENST00000604599 LMNAP02545 664 aaKnown RBP13.27□□□□□ -0.28
CDCA3-212ENST00000604599 PTPN4P29074 926 aa13.27□□□□□ -0.28
CDCA3-212ENST00000604599 FMO5P49326 533 aa13.27□□□□□ -0.28
CDCA3-212ENST00000604599 EIF6P56537 245 aaKnown RBP13.27□□□□□ -0.28
CDCA3-212ENST00000604599 EVA1CP58658 441 aa13.27□□□□□ -0.28
CDCA3-212ENST00000604599 KPNB1Q14974 876 aaKnown RBP13.27□□□□□ -0.28
CDCA3-212ENST00000604599 CYP4F22Q6NT55 531 aa13.27□□□□□ -0.28
CDCA3-212ENST00000604599 LRRC74BQ6ZQY2 392 aa13.27□□□□□ -0.28
CDCA3-212ENST00000604599 ANKRD35Q8N283 1001 aa13.27□□□□□ -0.28
CDCA3-212ENST00000604599 C10orf82Q8WW14 230 aa13.27□□□□□ -0.28
CDCA3-212ENST00000604599 BICD1Q96G01 975 aa13.27□□□□□ -0.28
CDCA3-212ENST00000604599 AGPAT1Q99943 283 aa13.27□□□□□ -0.28
CDCA3-212ENST00000604599 RIOX1Q9H6W3 641 aa13.27□□□□□ -0.28
CDCA3-212ENST00000604599 UBN1Q9NPG3 1134 aa13.27□□□□□ -0.28
CDCA3-212ENST00000604599 MROH7Q68CQ1 1323 aa13.27□□□□□ -0.28
CDCA3-212ENST00000604599 GSTTP1A0A1W2PQM5 241 aa13.27□□□□□ -0.29
CDCA3-212ENST00000604599 UBAP1LF5GYI3 381 aa13.27□□□□□ -0.29
CDCA3-212ENST00000604599 SLC16A3O15427 465 aaKnown RBP13.27□□□□□ -0.29
CDCA3-212ENST00000604599 GSTA2P09210 222 aa13.27□□□□□ -0.29
CDCA3-212ENST00000604599 GSTT1P30711 240 aa13.27□□□□□ -0.29
CDCA3-212ENST00000604599 CERKLQ49MI3 558 aaPredicted RBP13.27□□□□□ -0.29
CDCA3-212ENST00000604599 PARP10Q53GL7 1025 aa13.27□□□□□ -0.29
CDCA3-212ENST00000604599 ACSBG2Q5FVE4 666 aa13.27□□□□□ -0.29
CDCA3-212ENST00000604599 MTDHQ86UE4 582 aaKnown RBP13.27□□□□□ -0.29
CDCA3-212ENST00000604599 TXNRD3Q86VQ6 643 aa13.27□□□□□ -0.29
CDCA3-212ENST00000604599 CCDC125Q86Z20 511 aa13.27□□□□□ -0.29
CDCA3-212ENST00000604599 LRRC47Q8N1G4 583 aaKnown RBP13.27□□□□□ -0.29
CDCA3-212ENST00000604599 SPIRE2Q8WWL2 714 aa13.27□□□□□ -0.29
CDCA3-212ENST00000604599 SNF8Q96H20 258 aa13.27□□□□□ -0.29
CDCA3-212ENST00000604599 CADM1Q9BY67 442 aaKnown RBP13.27□□□□□ -0.29
CDCA3-212ENST00000604599 CHST7Q9NS84 486 aa13.27□□□□□ -0.29
CDCA3-212ENST00000604599 LGALS13Q9UHV8 139 aa13.27□□□□□ -0.29
CDCA3-212ENST00000604599 EDF1O60869 148 aaKnown RBP13.26□□□□□ -0.29
CDCA3-212ENST00000604599 ZCCHC18P0CG32 403 aa13.26□□□□□ -0.29
CDCA3-212ENST00000604599 CDK8P49336 464 aa13.26□□□□□ -0.29
CDCA3-212ENST00000604599 NLRP9Q7RTR0 991 aa13.26□□□□□ -0.29
CDCA3-212ENST00000604599 C4orf33Q8N1A6 199 aa13.26□□□□□ -0.29
CDCA3-212ENST00000604599 MXD3Q9BW11 206 aa13.26□□□□□ -0.29
CDCA3-212ENST00000604599 INTS2Q9H0H0 1204 aaKnown RBP13.26□□□□□ -0.29
CDCA3-212ENST00000604599 NPHS2Q9NP85 383 aa13.26□□□□□ -0.29
CDCA3-212ENST00000604599 FRMPD4Q14CM0 1322 aa13.26□□□□□ -0.29
CDCA3-212ENST00000604599 ARFGEF1Q9Y6D6 1849 aa13.26□□□□□ -0.29
CDCA3-212ENST00000604599 TBX10O75333 385 aa13.26□□□□□ -0.29
CDCA3-212ENST00000604599 ERFP50548 548 aa13.26□□□□□ -0.29
CDCA3-212ENST00000604599 COG2Q14746 738 aa13.26□□□□□ -0.29
CDCA3-212ENST00000604599 NSMFQ6X4W1 530 aa13.26□□□□□ -0.29
CDCA3-212ENST00000604599 CATSPER3Q86XQ3 398 aa13.26□□□□□ -0.29
CDCA3-212ENST00000604599 CLEC10AQ8IUN9 316 aa13.26□□□□□ -0.29
CDCA3-212ENST00000604599 MRRFQ96E11 262 aaKnown RBP13.26□□□□□ -0.29
CDCA3-212ENST00000604599 APEX2Q9UBZ4 518 aa13.26□□□□□ -0.29
CDCA3-212ENST00000604599 DCTN4Q9UJW0 460 aa13.26□□□□□ -0.29
CDCA3-212ENST00000604599 PHLPP1O60346 1717 aa13.26□□□□□ -0.29
CDCA3-212ENST00000604599 TGFB1I1O43294 461 aa13.26□□□□□ -0.29
CDCA3-212ENST00000604599 ECE2O60344 883 aa13.26□□□□□ -0.29
CDCA3-212ENST00000604599 CAMTA2O94983 1202 aa13.26□□□□□ -0.29
CDCA3-212ENST00000604599 ITIH2P19823 946 aa13.26□□□□□ -0.29
CDCA3-212ENST00000604599 ADCY8P40145 1251 aa13.26□□□□□ -0.29
CDCA3-212ENST00000604599 GPC5P78333 572 aa13.26□□□□□ -0.29
CDCA3-212ENST00000604599 OCRLQ01968 901 aa13.26□□□□□ -0.29
CDCA3-212ENST00000604599 CYP4A11Q02928 519 aa13.26□□□□□ -0.29
CDCA3-212ENST00000604599 DYNC1I2Q13409 638 aaKnown RBP13.26□□□□□ -0.29
CDCA3-212ENST00000604599 ERFEQ4G0M1 354 aa13.26□□□□□ -0.29
CDCA3-212ENST00000604599 RASIP1Q5U651 963 aa13.26□□□□□ -0.29
CDCA3-212ENST00000604599 SAMD1Q6SPF0 538 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms