RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 C6orf222P0C671 652 aaPredicted RBP13.31□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 STAT1P42224 750 aa13.31□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 DLG4P78352 724 aa13.31□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 GCNT1Q02742 428 aa13.31□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 PTPN11Q06124 597 aaPredicted RBP13.31□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 ASIC2Q16515 512 aa13.31□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 DCAF4L1Q3SXM0 396 aa13.31□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 ZACNQ401N2 412 aa13.31□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 C10orf76Q5T2E6 689 aa13.31□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 HGSNATQ68CP4 663 aa13.31□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 TOGARAM2Q6ZUX3 1019 aa13.31□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 NT5DC4Q86YG4 428 aa13.31□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 CCDC42Q96M95 316 aa13.31□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 FDXACB1Q9BRP7 624 aaPredicted RBP13.31□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 TSGA10Q9BZW7 698 aa13.31□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 HAPLN2Q9GZV7 340 aa13.31□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 ADAMTS10Q9H324 1103 aa13.31□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 HAUS4Q9H6D7 363 aa13.31□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 SETD4Q9NVD3 440 aa13.31□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 ARHGAP20Q9P2F6 1191 aa13.31□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 ANKFY1Q9P2R3 1169 aa13.31□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 CPSF3Q9UKF6 684 aaKnown RBP13.31□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 FHOD1Q9Y613 1164 aa13.31□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 F8VZ95 297 aa13.3□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 B4GALT4O60513 344 aa13.3□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 GPR32O75388 356 aa13.3□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 ERLIN2O94905 339 aa13.3□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 CYP2C9P11712 490 aa13.3□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 PRKAR2AP13861 404 aaKnown RBP13.3□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 MATR3P43243 847 aaKnown RBP eCLIP13.3□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 GCLMP48507 274 aa13.3□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 NLRP11P59045 1033 aaKnown RBP13.3□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 NCBP1Q09161 790 aaKnown RBP13.3□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 ASTE1Q2TB18 679 aaPredicted RBP13.3□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 ZNF568Q3ZCX4 644 aa13.3□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 GNASQ5JWF2 1037 aa13.3□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 IQCEQ6IPM2 695 aa13.3□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 CCSAPQ6IQ19 270 aaPredicted RBP13.3□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 FAM43BQ6ZT52 329 aaPredicted RBP13.3□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 VPS36Q86VN1 386 aa13.3□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 CD302Q8IX05 232 aa13.3□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 C7orf31Q8N865 590 aa13.3□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 ZSWIM2Q8NEG5 633 aa13.3□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 CD99L2Q8TCZ2 262 aa13.3□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 NLRP7Q8WX94 980 aa13.3□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 DHX38Q92620 1227 aaKnown RBP13.3□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 TSPAN18Q96SJ8 248 aa13.3□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 CHP1Q99653 195 aa13.3□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 ADPGKQ9BRR6 497 aa13.3□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 TSEN34Q9BSV6 310 aaKnown RBP13.3□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 NLRC4Q9NPP4 1024 aa13.3□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 XPNPEP3Q9NQH7 507 aa13.3□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 RAB20Q9NX57 234 aa13.3□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 GTF2IRD1Q9UHL9 959 aa13.3□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 PAXBP1Q9Y5B6 917 aa13.3□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 MYH10P35580 1976 aa13.29□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 A0A1B0GUA9 196 aa13.29□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 USP27XA6NNY8 438 aa13.29□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 TSPAN1O60635 241 aa13.29□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 C4BPAP04003 597 aaKnown RBP13.29□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 VTNP04004 478 aa13.29□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 CLTAP09496 248 aa13.29□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 SOX5P35711 763 aa13.29□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 KIF11P52732 1056 aa13.29□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 TERF1P54274 439 aa13.29□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 MFAP3P55082 362 aa13.29□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 ETF1P62495 437 aaKnown RBP13.29□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 RAPGEF1Q13905 1077 aa13.29□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 SPA17Q15506 151 aa13.29□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 SV2AQ7L0J3 742 aa13.29□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 IRF2BP2Q7Z5L9 587 aa13.29□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 RSPH3Q86UC2 560 aa13.29□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 C17orf53Q8N3J3 647 aaPredicted RBP13.29□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 RAET1EQ8TD07 263 aa13.29□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 CCDC127Q96BQ5 260 aa13.29□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 LENG1Q96BZ8 264 aaPredicted RBP13.29□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 ZBTB45Q96K62 511 aaPredicted RBP13.29□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 NT5C1BQ96P26 610 aa13.29□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 TCHPQ9BT92 498 aa13.29□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 CDT1Q9H211 546 aa13.29□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 DEF6Q9H4E7 631 aa13.29□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 FAM124BQ9H5Z6 455 aaPredicted RBP13.29□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 ASB7Q9H672 318 aa13.29□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 MINDY3Q9H8M7 445 aa13.29□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 DDX20Q9UHI6 824 aaKnown RBP13.29□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 DNAJC12Q9UKB3 198 aa13.29□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 MOXD2PA6NHM9 499 aa13.28□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 CAND2O75155 1236 aa13.28□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 GJB1P08034 283 aa13.28□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 ACTN1P12814 892 aa13.28□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 TNNT1P13805 278 aa13.28□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 DARSP14868 501 aaKnown RBP13.28□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 ARF4P18085 180 aaPredicted RBP13.28□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 ACOT2P49753 483 aa13.28□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 VAV2P52735 878 aa13.28□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 CRYBB1P53674 252 aaPredicted RBP13.28□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 BEX3Q00994 111 aa13.28□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 KLHL30Q0D2K2 578 aa13.28□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 BMS1Q14692 1282 aaKnown RBP13.28□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 MTF1Q14872 753 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms