RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 AADATQ8N5Z0 425 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 CCT6BQ92526 530 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 C8orf76Q96K31 380 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 RPGRIP1Q96KN7 1286 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 CTAGE1Q96RT6 745 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 SEC62Q99442 399 aaKnown RBP5.05□□□□□ -1.6
LINC01109-201ENST00000603837 CHCHD6Q9BRQ6 235 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 UQCC2Q9BRT2 126 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 MRPL9Q9BYD2 267 aaKnown RBP5.05□□□□□ -1.6
LINC01109-201ENST00000603837 EDEM3Q9BZQ6 932 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 DRC3Q9H069 523 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 SEMA4AQ9H3S1 761 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 LIN28AQ9H9Z2 209 aaKnown RBP5.05□□□□□ -1.6
LINC01109-201ENST00000603837 COPRSQ9NQ92 184 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 KCNQ5Q9NR82 932 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 RMND1Q9NWS8 449 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 DLGAP2Q9P1A6 1054 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 SH3BGRL2Q9UJC5 107 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 LRRC7Q96NW7 1537 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 DLC1Q96QB1 1528 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 NSD3Q9BZ95 1437 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 PNPLA6Q8IY17 1366 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 NRKQ7Z2Y5 1582 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 MYPNQ86TC9 1320 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 MON2Q7Z3U7 1717 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 CTAGE9A4FU28 777 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 CFAP73A6NFT4 308 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 SRRM3A6NNA2 597 aaPredicted RBP5.05□□□□□ -1.6
LINC01109-201ENST00000603837 USP17L15C9J2P7 530 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 USP17L10C9JJH3 530 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 USP17L13C9JLJ4 530 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 USP17L12C9JPN9 530 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 USP17L11C9JVI0 530 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 USP17L21D6R901 530 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 USP17L18D6R9N7 530 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 USP17L22D6RA61 530 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 USP17L17D6RBQ6 530 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 USP17L19D6RCP7 530 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 USP17L20D6RJB6 530 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 RIPK2O43353 540 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 PLOD3O60568 738 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 ATP2A2P16615 1042 aaKnown RBP5.05□□□□□ -1.6
LINC01109-201ENST00000603837 USP14P54578 494 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 TPD52P55327 224 aaPredicted RBP5.05□□□□□ -1.6
LINC01109-201ENST00000603837 USP17L24Q0WX57 530 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 IFRD2Q12894 506 aaPredicted RBP5.05□□□□□ -1.6
LINC01109-201ENST00000603837 CNGA3Q16281 694 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 IFI16Q16666 785 aaKnown RBP5.05□□□□□ -1.6
LINC01109-201ENST00000603837 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.05□□□□□ -1.6
LINC01109-201ENST00000603837 MTERF2Q49AM1 385 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 ZNF362Q5T0B9 420 aaPredicted RBP5.05□□□□□ -1.6
LINC01109-201ENST00000603837 KDM7AQ6ZMT4 941 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 SYDE1Q6ZW31 735 aaPredicted RBP5.05□□□□□ -1.6
LINC01109-201ENST00000603837 PTF1AQ7RTS3 328 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 CACNA2D3Q8IZS8 1091 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 SIX5Q8N196 739 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 CBARPQ8N350 705 aaPredicted RBP5.05□□□□□ -1.6
LINC01109-201ENST00000603837 SYT2Q8N9I0 419 aaPredicted RBP5.05□□□□□ -1.6
LINC01109-201ENST00000603837 ZNF280CQ8ND82 737 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 GTF3C2Q8WUA4 911 aaPredicted RBP5.05□□□□□ -1.6
LINC01109-201ENST00000603837 SSH1Q8WYL5 1049 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 DPF3Q92784 378 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 CNDP2Q96KP4 475 aaKnown RBP5.05□□□□□ -1.6
LINC01109-201ENST00000603837 CCT7Q99832 543 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 SIKE1Q9BRV8 207 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 MRPL46Q9H2W6 279 aaKnown RBP5.05□□□□□ -1.6
LINC01109-201ENST00000603837 BRD9Q9H8M2 597 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 PFDN4Q9NQP4 134 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 PANK4Q9NVE7 773 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 KIAA1257Q9ULG3 409 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 GPR52Q9Y2T5 361 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 XRN1Q8IZH2 1706 aaKnown RBP5.05□□□□□ -1.6
LINC01109-201ENST00000603837 C17orf113A0A1B0GUU1 675 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 BACH1O14867 736 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 FSCN2O14926 492 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 ICMTO60725 284 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 SMPD2O60906 423 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 NPPAP01160 153 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 KRT14P02533 472 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 GSTA2P09210 222 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 CLTBP09497 229 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 EPB41P11171 864 aaKnown RBP5.05□□□□□ -1.6
LINC01109-201ENST00000603837 CD9P21926 228 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 CNTFP26441 200 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 GJB2P29033 226 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 CAP2P40123 477 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 CCT6AP40227 531 aaKnown RBP5.05□□□□□ -1.6
LINC01109-201ENST00000603837 PRKG1Q13976 671 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 TLR1Q15399 786 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 IGSF11Q5DX21 431 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 MAEAQ7L5Y9 396 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 LYSMD3Q7Z3D4 306 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 LRRTM3Q86VH5 581 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 ANKLE2Q86XL3 938 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 THNSL2Q86YJ6 484 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 SPERTQ8NA61 448 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 CDC26Q8NHZ8 85 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 TTC17Q96AE7 1141 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 CFAP36Q96G28 342 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 HIC2Q96JB3 615 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms