RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 GRIP2Q9C0E4 1043 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 RBM38Q9H0Z9 239 aaKnown RBP9.42□□□□□ -0.9
COMMD3-215ENST00000602574 C10orf88Q9H8K7 445 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 WASH6PQ9NQA3 447 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 GDF3Q9NR23 364 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 INTS13Q9NVM9 706 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 SLC39A1Q9NY26 324 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 TAS2R7Q9NYW3 318 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 EHD2Q9NZN4 543 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 PCDHA12Q9UN75 941 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 NRKQ7Z2Y5 1582 aa9.41□□□□□ -0.9
COMMD3-215ENST00000602574 WNK3Q9BYP7 1800 aa9.41□□□□□ -0.9
COMMD3-215ENST00000602574 CRYBG1Q9Y4K1 1723 aa9.41□□□□□ -0.9
COMMD3-215ENST00000602574 A0A1W2PP64 1363 aa9.41□□□□□ -0.9
COMMD3-215ENST00000602574 ALX3O95076 343 aa9.41□□□□□ -0.9
COMMD3-215ENST00000602574 ESRRBO95718 433 aa9.41□□□□□ -0.9
COMMD3-215ENST00000602574 GYS1P13807 737 aa9.41□□□□□ -0.9
COMMD3-215ENST00000602574 LMOD1P29536 600 aaPredicted RBP9.41□□□□□ -0.9
COMMD3-215ENST00000602574 P2RX3P56373 397 aa9.41□□□□□ -0.9
COMMD3-215ENST00000602574 POLR2GP62487 172 aaKnown RBP eCLIP9.41□□□□□ -0.9
COMMD3-215ENST00000602574 KCNJ8Q15842 424 aa9.41□□□□□ -0.9
COMMD3-215ENST00000602574 ZC2HC1CQ53FD0 456 aaPredicted RBP9.41□□□□□ -0.9
COMMD3-215ENST00000602574 ARMC4Q5T2S8 1044 aa9.41□□□□□ -0.9
COMMD3-215ENST00000602574 TPTE2Q6XPS3 522 aa9.41□□□□□ -0.9
COMMD3-215ENST00000602574 PPP1R21Q6ZMI0 780 aa9.41□□□□□ -0.9
COMMD3-215ENST00000602574 LRRC74BQ6ZQY2 392 aa9.41□□□□□ -0.9
COMMD3-215ENST00000602574 DCDC5Q6ZRR9 648 aa9.41□□□□□ -0.9
COMMD3-215ENST00000602574 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.41□□□□□ -0.9
COMMD3-215ENST00000602574 GALNT11Q8NCW6 608 aa9.41□□□□□ -0.9
COMMD3-215ENST00000602574 PRICKLE1Q96MT3 831 aaPredicted RBP9.41□□□□□ -0.9
COMMD3-215ENST00000602574 CCDC77Q9BR77 488 aa9.41□□□□□ -0.9
COMMD3-215ENST00000602574 DDX47Q9H0S4 455 aaKnown RBP9.41□□□□□ -0.9
COMMD3-215ENST00000602574 ABI2Q9NYB9 513 aaPredicted RBP9.41□□□□□ -0.9
COMMD3-215ENST00000602574 RTCBQ9Y3I0 505 aaKnown RBP9.41□□□□□ -0.9
COMMD3-215ENST00000602574 USP15Q9Y4E8 981 aaPredicted RBP9.41□□□□□ -0.9
COMMD3-215ENST00000602574 MAP3K15Q6ZN16 1313 aa9.41□□□□□ -0.9
COMMD3-215ENST00000602574 ZSCAN5BA6NJL1 495 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 GOLGA8JA6NMD2 632 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 AREL1O15033 823 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 NDUFA2O43678 99 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 SNX3O60493 162 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 SUN1O94901 812 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 ATG7O95352 703 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 OCM2P0CE71 109 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 OCMP0CE72 109 aaPredicted RBP9.4□□□□□ -0.9
COMMD3-215ENST00000602574 ATF7P17544 494 aaPredicted RBP9.4□□□□□ -0.9
COMMD3-215ENST00000602574 IST1P53990 364 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 MARSP56192 900 aaKnown RBP9.4□□□□□ -0.9
COMMD3-215ENST00000602574 TBX4P57082 545 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 BPIFB3P59826 476 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 SRP54P61011 504 aaKnown RBP9.4□□□□□ -0.9
COMMD3-215ENST00000602574 MRPS15P82914 257 aaKnown RBP9.4□□□□□ -0.9
COMMD3-215ENST00000602574 SLC34A1Q06495 639 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 HNRNPDQ14103 355 aaKnown RBP9.4□□□□□ -0.9
COMMD3-215ENST00000602574 WDR72Q3MJ13 1102 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 ZBTB41Q5SVQ8 909 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 ZNF704Q6ZNC4 412 aaPredicted RBP9.4□□□□□ -0.9
COMMD3-215ENST00000602574 PCYOX1LQ8NBM8 494 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 ARRDC4Q8NCT1 418 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 CEP70Q8NHQ1 597 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 UTP4Q969X6 686 aaKnown RBP9.4□□□□□ -0.9
COMMD3-215ENST00000602574 NMD3Q96D46 503 aaKnown RBP9.4□□□□□ -0.9
COMMD3-215ENST00000602574 ALPK1Q96QP1 1244 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 FERD3LQ96RJ6 166 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 TSG101Q99816 390 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 PSD2Q9BQI7 771 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 TSEN34Q9BSV6 310 aaKnown RBP9.4□□□□□ -0.9
COMMD3-215ENST00000602574 MXD3Q9BW11 206 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 MTMR12Q9C0I1 747 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 TLE6Q9H808 572 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 BRD9Q9H8M2 597 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 NLRC4Q9NPP4 1024 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 RABGEF1Q9UJ41 708 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 MAP2P11137 1827 aaKnown RBP9.4□□□□□ -0.9
COMMD3-215ENST00000602574 DLC1Q96QB1 1528 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 TRAV6A0A075B6T7 132 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 PNMA6FA0A0J9YX94 578 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 SOWAHDA6NJG2 315 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 TRAFD1O14545 582 aaPredicted RBP9.4□□□□□ -0.9
COMMD3-215ENST00000602574 XPO1O14980 1071 aaKnown RBP9.4□□□□□ -0.9
COMMD3-215ENST00000602574 HDAC3O15379 428 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 RHOBTB3O94955 611 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 DDX58O95786 925 aaKnown RBP9.4□□□□□ -0.9
COMMD3-215ENST00000602574 CPA1P15085 419 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 TCEA1P23193 301 aaKnown RBP9.4□□□□□ -0.9
COMMD3-215ENST00000602574 PKLRP30613 574 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 SLC26A3P40879 764 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 RPL5P46777 297 aaKnown RBP9.4□□□□□ -0.9
COMMD3-215ENST00000602574 VPS41P49754 854 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 CD83Q01151 205 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 PTK2BQ14289 1009 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 NPTX1Q15818 432 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 TWISTNBQ3B726 338 aaPredicted RBP9.4□□□□□ -0.9
COMMD3-215ENST00000602574 CEP85Q6P2H3 762 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 ERI1Q8IV48 349 aaKnown RBP9.4□□□□□ -0.9
COMMD3-215ENST00000602574 FAM13CQ8NE31 585 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 C7orf57Q8NEG2 295 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 TTLQ8NG68 377 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 SLC22A8Q8TCC7 542 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 SGK3Q96BR1 496 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms