RNA–Protein interactions for RNA: ENST00000602056.1

GTPBP3-227, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 2

Gene GTPBP3, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-227ENST00000602056 ERMNQ8TAM6 284 aa25.69■■□□□ 1.7
GTPBP3-227ENST00000602056 KIF2CQ99661 725 aa25.69■■□□□ 1.7
GTPBP3-227ENST00000602056 KIFC3Q9BVG8 833 aa25.69■■□□□ 1.7
GTPBP3-227ENST00000602056 FNIP2Q9P278 1114 aa25.69■■□□□ 1.7
GTPBP3-227ENST00000602056 CASTOR2A6NHX0 329 aa25.68■■□□□ 1.7
GTPBP3-227ENST00000602056 N4BP3O15049 544 aa25.68■■□□□ 1.7
GTPBP3-227ENST00000602056 EIF5BO60841 1220 aaKnown RBP25.68■■□□□ 1.7
GTPBP3-227ENST00000602056 TADA2AO75478 443 aa25.68■■□□□ 1.7
GTPBP3-227ENST00000602056 RECQL4O94761 1208 aa25.68■■□□□ 1.7
GTPBP3-227ENST00000602056 PRKCBP05771 671 aa25.68■■□□□ 1.7
GTPBP3-227ENST00000602056 TUSC3Q13454 348 aa25.68■■□□□ 1.7
GTPBP3-227ENST00000602056 PRPF4BQ13523 1007 aaKnown RBP25.68■■□□□ 1.7
GTPBP3-227ENST00000602056 NAB2Q15742 525 aa25.68■■□□□ 1.7
GTPBP3-227ENST00000602056 ASTLQ6HA08 431 aaPredicted RBP25.68■■□□□ 1.7
GTPBP3-227ENST00000602056 CYP26C1Q6V0L0 522 aa25.68■■□□□ 1.7
GTPBP3-227ENST00000602056 NOSTRINQ8IVI9 506 aa25.68■■□□□ 1.7
GTPBP3-227ENST00000602056 HASPINQ8TF76 798 aa25.68■■□□□ 1.7
GTPBP3-227ENST00000602056 HDAC7Q8WUI4 952 aa25.68■■□□□ 1.7
GTPBP3-227ENST00000602056 SMG7Q92540 1137 aaKnown RBP25.68■■□□□ 1.7
GTPBP3-227ENST00000602056 MYADMQ96S97 322 aa25.68■■□□□ 1.7
GTPBP3-227ENST00000602056 NT5C3AQ9H0P0 336 aa25.68■■□□□ 1.7
GTPBP3-227ENST00000602056 C2orf40Q9H1Z8 148 aa25.68■■□□□ 1.7
GTPBP3-227ENST00000602056 CLUHO75153 1309 aa25.67■■□□□ 1.7
GTPBP3-227ENST00000602056 ACKR2O00590 384 aa25.67■■□□□ 1.7
GTPBP3-227ENST00000602056 KIF4AO95239 1232 aa25.67■■□□□ 1.7
GTPBP3-227ENST00000602056 C1RP00736 705 aa25.67■■□□□ 1.7
GTPBP3-227ENST00000602056 NPR3P17342 541 aa25.67■■□□□ 1.7
GTPBP3-227ENST00000602056 NAMPTP43490 491 aa25.67■■□□□ 1.7
GTPBP3-227ENST00000602056 RBM25P49756 843 aaKnown RBP25.67■■□□□ 1.7
GTPBP3-227ENST00000602056 MAPK6Q16659 721 aa25.67■■□□□ 1.7
GTPBP3-227ENST00000602056 CWF19L1Q69YN2 538 aaKnown RBP25.67■■□□□ 1.7
GTPBP3-227ENST00000602056 PRSS55Q6UWB4 352 aaPredicted RBP25.67■■□□□ 1.7
GTPBP3-227ENST00000602056 RSAD2Q8WXG1 361 aa25.67■■□□□ 1.7
GTPBP3-227ENST00000602056 ATOH1Q92858 354 aaPredicted RBP25.67■■□□□ 1.7
GTPBP3-227ENST00000602056 PLEKHA4Q9H4M7 779 aa25.67■■□□□ 1.7
GTPBP3-227ENST00000602056 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.67■■□□□ 1.7
GTPBP3-227ENST00000602056 DPP7Q9UHL4 492 aa25.67■■□□□ 1.7
GTPBP3-227ENST00000602056 DUSP12Q9UNI6 340 aa25.67■■□□□ 1.7
GTPBP3-227ENST00000602056 LIG1P18858 919 aa25.66■■□□□ 1.7
GTPBP3-227ENST00000602056 IGFBP6P24592 240 aaPredicted RBP25.66■■□□□ 1.7
GTPBP3-227ENST00000602056 FXR2P51116 673 aaKnown RBP eCLIP25.66■■□□□ 1.7
GTPBP3-227ENST00000602056 DEPTORQ8TB45 409 aa25.66■■□□□ 1.7
GTPBP3-227ENST00000602056 NARSO43776 548 aaKnown RBP25.65■■□□□ 1.7
GTPBP3-227ENST00000602056 MUTP22033 750 aa25.65■■□□□ 1.7
GTPBP3-227ENST00000602056 CCT6AP40227 531 aaKnown RBP25.65■■□□□ 1.7
GTPBP3-227ENST00000602056 TOB1P50616 345 aaPredicted RBP25.65■■□□□ 1.7
GTPBP3-227ENST00000602056 NT5DC1Q5TFE4 455 aa25.65■■□□□ 1.7
GTPBP3-227ENST00000602056 CLSTN3Q9BQT9 956 aa25.65■■□□□ 1.7
GTPBP3-227ENST00000602056 BHMT2Q9H2M3 363 aa25.65■■□□□ 1.7
GTPBP3-227ENST00000602056 IGSF9Q9P2J2 1179 aa25.65■■□□□ 1.7
GTPBP3-227ENST00000602056 EPS15L1Q9UBC2 864 aa25.65■■□□□ 1.7
GTPBP3-227ENST00000602056 SF3B1O75533 1304 aaKnown RBP eCLIP25.64■■□□□ 1.73e-13■■■■■ 86.2
GTPBP3-227ENST00000602056 THP07101 528 aa25.64■■□□□ 1.7
GTPBP3-227ENST00000602056 GBP2P32456 591 aaPredicted RBP25.64■■□□□ 1.7
GTPBP3-227ENST00000602056 TRAPPC10P48553 1259 aa25.64■■□□□ 1.7
GTPBP3-227ENST00000602056 CLCN5P51795 746 aa25.64■■□□□ 1.7
GTPBP3-227ENST00000602056 HMGN5P82970 282 aaKnown RBP25.64■■□□□ 1.7
GTPBP3-227ENST00000602056 ELMSAN1Q6PJG2 1045 aa25.64■■□□□ 1.7
GTPBP3-227ENST00000602056 LNX1Q8TBB1 728 aaPredicted RBP25.64■■□□□ 1.7
GTPBP3-227ENST00000602056 ZSCAN31Q96LW9 406 aaPredicted RBP25.64■■□□□ 1.7
GTPBP3-227ENST00000602056 PRKD2Q9BZL6 878 aa25.64■■□□□ 1.7
GTPBP3-227ENST00000602056 MFSD1Q9H3U5 465 aa25.64■■□□□ 1.7
GTPBP3-227ENST00000602056 ZDHHC7Q9NXF8 308 aa25.64■■□□□ 1.7
GTPBP3-227ENST00000602056 PLXNA3P51805 1871 aa25.64■■□□□ 1.69
GTPBP3-227ENST00000602056 C2orf16Q68DN1 1984 aa25.64■■□□□ 1.69
GTPBP3-227ENST00000602056 ADAM12O43184 909 aa25.63■■□□□ 1.69
GTPBP3-227ENST00000602056 PI15O43692 258 aa25.63■■□□□ 1.69
GTPBP3-227ENST00000602056 TMEM132AQ24JP5 1023 aa25.63■■□□□ 1.69
GTPBP3-227ENST00000602056 FAM171A1Q5VUB5 890 aa25.63■■□□□ 1.69
GTPBP3-227ENST00000602056 HAUS3Q68CZ6 603 aa25.63■■□□□ 1.69
GTPBP3-227ENST00000602056 FLCNQ8NFG4 579 aa25.63■■□□□ 1.69
GTPBP3-227ENST00000602056 PIK3R5Q8WYR1 880 aa25.63■■□□□ 1.69
GTPBP3-227ENST00000602056 TTPALQ9BTX7 342 aa25.63■■□□□ 1.69
GTPBP3-227ENST00000602056 IRF2BPLQ9H1B7 796 aa25.63■■□□□ 1.69
GTPBP3-227ENST00000602056 LRWD1Q9UFC0 647 aa25.63■■□□□ 1.69
GTPBP3-227ENST00000602056 KIAA1024Q9UPX6 916 aa25.63■■□□□ 1.69
GTPBP3-227ENST00000602056 GDAQ9Y2T3 454 aa25.63■■□□□ 1.69
GTPBP3-227ENST00000602056 ZMYND10O75800 440 aa25.62■■□□□ 1.69
GTPBP3-227ENST00000602056 U2AF2P26368 475 aaKnown RBP eCLIP25.62■■□□□ 1.693e-7■■□□□ 13.8
GTPBP3-227ENST00000602056 CREMQ03060 361 aa25.62■■□□□ 1.69
GTPBP3-227ENST00000602056 PPP2R5AQ15172 486 aa25.62■■□□□ 1.69
GTPBP3-227ENST00000602056 IGSF22Q8N9C0 903 aa25.62■■□□□ 1.69
GTPBP3-227ENST00000602056 STAMQ92783 540 aa25.62■■□□□ 1.69
GTPBP3-227ENST00000602056 ADPGKQ9BRR6 497 aa25.62■■□□□ 1.69
GTPBP3-227ENST00000602056 FBXW11Q9UKB1 542 aa25.62■■□□□ 1.69
GTPBP3-227ENST00000602056 PCDHB6Q9Y5E3 794 aa25.62■■□□□ 1.69
GTPBP3-227ENST00000602056 ZFHX2Q9C0A1 2572 aaPredicted RBP25.61■■□□□ 1.69
GTPBP3-227ENST00000602056 PTGDRQ13258 359 aa25.61■■□□□ 1.69
GTPBP3-227ENST00000602056 IL17AQ16552 155 aa25.61■■□□□ 1.69
GTPBP3-227ENST00000602056 ATF7IP2Q5U623 682 aa25.61■■□□□ 1.69
GTPBP3-227ENST00000602056 CD300LGQ6UXG3 332 aa25.61■■□□□ 1.69
GTPBP3-227ENST00000602056 CEP57Q86XR8 500 aa25.61■■□□□ 1.69
GTPBP3-227ENST00000602056 SIX5Q8N196 739 aa25.61■■□□□ 1.69
GTPBP3-227ENST00000602056 SLC44A3Q8N4M1 653 aa25.61■■□□□ 1.69
GTPBP3-227ENST00000602056 FAM184AQ8NB25 1140 aa25.61■■□□□ 1.69
GTPBP3-227ENST00000602056 KIFAP3Q92845 792 aa25.61■■□□□ 1.69
GTPBP3-227ENST00000602056 PIDD1Q9HB75 910 aa25.61■■□□□ 1.69
GTPBP3-227ENST00000602056 SH2B1Q9NRF2 756 aaPredicted RBP25.61■■□□□ 1.69
GTPBP3-227ENST00000602056 DDX19AQ9NUU7 478 aaKnown RBP25.61■■□□□ 1.69
GTPBP3-227ENST00000602056 PP2D1A8MPX8 630 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms