RNA–Protein interactions for RNA: ENST00000601853.5

FARP1-237, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-237ENST00000601853 F5P12259 2224 aa16.92■□□□□ 0.3
FARP1-237ENST00000601853 CNOT1A5YKK6 2376 aaKnown RBP16.92■□□□□ 0.3
FARP1-237ENST00000601853 SHISA7A6NL88 538 aa16.92■□□□□ 0.3
FARP1-237ENST00000601853 EML1O00423 815 aa16.92■□□□□ 0.3
FARP1-237ENST00000601853 DKC1O60832 514 aaKnown RBP eCLIP16.92■□□□□ 0.38e-20■■■■■ 32.9
FARP1-237ENST00000601853 LRP3O75074 770 aa16.92■□□□□ 0.3
FARP1-237ENST00000601853 TDP2O95551 362 aa16.92■□□□□ 0.3
FARP1-237ENST00000601853 C8AP07357 584 aa16.92■□□□□ 0.3
FARP1-237ENST00000601853 TDGF1P13385 188 aa16.92■□□□□ 0.3
FARP1-237ENST00000601853 AKAP17AQ02040 695 aaKnown RBP16.92■□□□□ 0.3
FARP1-237ENST00000601853 ADCY1Q08828 1119 aa16.92■□□□□ 0.3
FARP1-237ENST00000601853 SPEM2Q0P670 501 aa16.92■□□□□ 0.3
FARP1-237ENST00000601853 MTAPQ13126 283 aa16.92■□□□□ 0.3
FARP1-237ENST00000601853 UVSSAQ2YD98 709 aa16.92■□□□□ 0.3
FARP1-237ENST00000601853 RTP2Q5QGT7 225 aa16.92■□□□□ 0.3
FARP1-237ENST00000601853 LIN9Q5TKA1 542 aa16.92■□□□□ 0.3
FARP1-237ENST00000601853 LAIR1Q6GTX8 287 aa16.92■□□□□ 0.3
FARP1-237ENST00000601853 FERMT3Q86UX7 667 aa16.92■□□□□ 0.3
FARP1-237ENST00000601853 RASEFQ8IZ41 740 aa16.92■□□□□ 0.3
FARP1-237ENST00000601853 CELF5Q8N6W0 485 aaKnown RBP16.92■□□□□ 0.3
FARP1-237ENST00000601853 LNX1Q8TBB1 728 aaPredicted RBP16.92■□□□□ 0.3
FARP1-237ENST00000601853 TCP11Q8WWU5 503 aa16.92■□□□□ 0.3
FARP1-237ENST00000601853 C22orf23Q9BZE7 217 aa16.92■□□□□ 0.3
FARP1-237ENST00000601853 SH3GLB2Q9NR46 395 aa16.92■□□□□ 0.3
FARP1-237ENST00000601853 CCL16O15467 120 aa16.91■□□□□ 0.3
FARP1-237ENST00000601853 ECI2O75521 394 aa16.91■□□□□ 0.3
FARP1-237ENST00000601853 HMGB1P09429 215 aaKnown RBP16.91■□□□□ 0.3
FARP1-237ENST00000601853 PTENP60484 403 aa16.91■□□□□ 0.3
FARP1-237ENST00000601853 POU5F1BQ06416 359 aa16.91■□□□□ 0.3
FARP1-237ENST00000601853 NTRK3Q16288 839 aa16.91■□□□□ 0.3
FARP1-237ENST00000601853 NPAS3Q8IXF0 933 aa16.91■□□□□ 0.3
FARP1-237ENST00000601853 HACE1Q8IYU2 909 aa16.91■□□□□ 0.3
FARP1-237ENST00000601853 ZNF687Q8N1G0 1237 aa16.91■□□□□ 0.3
FARP1-237ENST00000601853 PIK3R5Q8WYR1 880 aa16.91■□□□□ 0.3
FARP1-237ENST00000601853 RABGGTAQ92696 567 aa16.91■□□□□ 0.3
FARP1-237ENST00000601853 CPB2Q96IY4 423 aa16.91■□□□□ 0.3
FARP1-237ENST00000601853 TTPALQ9BTX7 342 aa16.91■□□□□ 0.3
FARP1-237ENST00000601853 VPS54Q9P1Q0 977 aa16.91■□□□□ 0.3
FARP1-237ENST00000601853 RAB23Q9ULC3 237 aa16.91■□□□□ 0.3
FARP1-237ENST00000601853 POLIQ9UNA4 740 aa16.91■□□□□ 0.3
FARP1-237ENST00000601853 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.91■□□□□ 0.3
FARP1-237ENST00000601853 SF3B1O75533 1304 aaKnown RBP eCLIP16.91■□□□□ 0.3
FARP1-237ENST00000601853 NID2Q14112 1375 aa16.9■□□□□ 0.3
FARP1-237ENST00000601853 P4HBP07237 508 aaKnown RBP16.9■□□□□ 0.3
FARP1-237ENST00000601853 RETP07949 1114 aa16.9■□□□□ 0.3
FARP1-237ENST00000601853 AKAP5P24588 427 aa16.9■□□□□ 0.3
FARP1-237ENST00000601853 GRIK3Q13003 919 aa16.9■□□□□ 0.3
FARP1-237ENST00000601853 PPP2R5CQ13362 524 aa16.9■□□□□ 0.3
FARP1-237ENST00000601853 KRT32Q14532 448 aa16.9■□□□□ 0.3
FARP1-237ENST00000601853 HSP90AA2PQ14568 343 aaPredicted RBP16.9■□□□□ 0.3
FARP1-237ENST00000601853 MOXD1Q6UVY6 613 aa16.9■□□□□ 0.3
FARP1-237ENST00000601853 RTL10Q7L3V2 364 aa16.9■□□□□ 0.3
FARP1-237ENST00000601853 IFNLR1Q8IU57 520 aaPredicted RBP16.9■□□□□ 0.3
FARP1-237ENST00000601853 APOL6Q9BWW8 343 aa16.9■□□□□ 0.3
FARP1-237ENST00000601853 RNF26Q9BY78 433 aaPredicted RBP16.9■□□□□ 0.3
FARP1-237ENST00000601853 NXF3Q9H4D5 531 aaKnown RBP16.9■□□□□ 0.3
FARP1-237ENST00000601853 HEBP1Q9NRV9 189 aa16.9■□□□□ 0.3
FARP1-237ENST00000601853 GDE1Q9NZC3 331 aa16.9■□□□□ 0.3
FARP1-237ENST00000601853 WRAP73Q9P2S5 460 aaPredicted RBP16.9■□□□□ 0.3
FARP1-237ENST00000601853 DNMT3BQ9UBC3 853 aaKnown RBP16.9■□□□□ 0.3
FARP1-237ENST00000601853 NOTCH4Q99466 2003 aa16.9■□□□□ 0.3
FARP1-237ENST00000601853 ZMYM2Q9UBW7 1377 aa16.89■□□□□ 0.3
FARP1-237ENST00000601853 CEP295Q9C0D2 2601 aa16.89■□□□□ 0.29
FARP1-237ENST00000601853 NLRP5P59047 1200 aa16.89■□□□□ 0.29
FARP1-237ENST00000601853 FGD1P98174 961 aa16.89■□□□□ 0.29
FARP1-237ENST00000601853 MXD4Q14582 209 aaPredicted RBP16.89■□□□□ 0.29
FARP1-237ENST00000601853 EMC2Q15006 297 aa16.89■□□□□ 0.29
FARP1-237ENST00000601853 PSMD5Q16401 504 aa16.89■□□□□ 0.29
FARP1-237ENST00000601853 AMHR2Q16671 573 aa16.89■□□□□ 0.29
FARP1-237ENST00000601853 PABPC1LQ4VXU2 614 aaKnown RBP16.89■□□□□ 0.29
FARP1-237ENST00000601853 AXDND1Q5T1B0 1012 aaPredicted RBP16.89■□□□□ 0.29
FARP1-237ENST00000601853 FAM171A1Q5VUB5 890 aa16.89■□□□□ 0.29
FARP1-237ENST00000601853 C4orf19Q8IY42 314 aa16.89■□□□□ 0.29
FARP1-237ENST00000601853 PAAF1Q9BRP4 392 aa16.89■□□□□ 0.29
FARP1-237ENST00000601853 PLA2G2FQ9BZM2 168 aa16.89■□□□□ 0.29
FARP1-237ENST00000601853 TRIM6Q9C030 488 aaPredicted RBP16.89■□□□□ 0.29
FARP1-237ENST00000601853 CHRDQ9H2X0 955 aa16.89■□□□□ 0.29
FARP1-237ENST00000601853 HCFC1R1Q9NWW0 138 aa16.89■□□□□ 0.29
FARP1-237ENST00000601853 FAM208BQ5VWN6 2430 aa16.88■□□□□ 0.29
FARP1-237ENST00000601853 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.88■□□□□ 0.29
FARP1-237ENST00000601853 INO80B-WBP1J3KQ70 363 aa16.88■□□□□ 0.29
FARP1-237ENST00000601853 MAN2B1O00754 1011 aa16.88■□□□□ 0.29
FARP1-237ENST00000601853 ADAM12O43184 909 aa16.88■□□□□ 0.29
FARP1-237ENST00000601853 IFNAR1P17181 557 aa16.88■□□□□ 0.29
FARP1-237ENST00000601853 ARF4P18085 180 aaPredicted RBP16.88■□□□□ 0.29
FARP1-237ENST00000601853 TUSC3Q13454 348 aa16.88■□□□□ 0.29
FARP1-237ENST00000601853 RAB33AQ14088 237 aa16.88■□□□□ 0.29
FARP1-237ENST00000601853 PPP2R5DQ14738 602 aa16.88■□□□□ 0.29
FARP1-237ENST00000601853 PDXDC1Q6P996 788 aa16.88■□□□□ 0.29
FARP1-237ENST00000601853 OTUD6AQ7L8S5 288 aa16.88■□□□□ 0.29
FARP1-237ENST00000601853 SLC7A14Q8TBB6 771 aa16.88■□□□□ 0.29
FARP1-237ENST00000601853 DNASE1L2Q92874 299 aa16.88■□□□□ 0.29
FARP1-237ENST00000601853 IER2Q9BTL4 223 aa16.88■□□□□ 0.29
FARP1-237ENST00000601853 BMP2KQ9NSY1 1161 aaPredicted RBP16.88■□□□□ 0.29
FARP1-237ENST00000601853 KLK14Q9P0G3 267 aa16.88■□□□□ 0.29
FARP1-237ENST00000601853 VAV3Q9UKW4 847 aa16.88■□□□□ 0.29
FARP1-237ENST00000601853 PCDHA4Q9UN74 947 aa16.88■□□□□ 0.29
FARP1-237ENST00000601853 A0A1B0GUA9 196 aa16.87■□□□□ 0.29
FARP1-237ENST00000601853 M0R2N6 131 aa16.87■□□□□ 0.29
FARP1-237ENST00000601853 YWHABP31946 246 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms