RNA–Protein interactions for RNA: ENST00000601849.1

VRK3-224, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-224ENST00000601849 POLR3FQ9H1D9 316 aaPredicted RBP10.6□□□□□ -0.71
VRK3-224ENST00000601849 NXF3Q9H4D5 531 aaKnown RBP10.6□□□□□ -0.71
VRK3-224ENST00000601849 KLK14Q9P0G3 267 aa10.6□□□□□ -0.71
VRK3-224ENST00000601849 VPS13AQ96RL7 3174 aa10.6□□□□□ -0.71
VRK3-224ENST00000601849 N4BP3O15049 544 aa10.59□□□□□ -0.71
VRK3-224ENST00000601849 TRAPPC3O43617 180 aa10.59□□□□□ -0.71
VRK3-224ENST00000601849 USO1O60763 962 aaKnown RBP10.59□□□□□ -0.71
VRK3-224ENST00000601849 EFEMP2O95967 443 aa10.59□□□□□ -0.71
VRK3-224ENST00000601849 GLRA2P23416 452 aa10.59□□□□□ -0.71
VRK3-224ENST00000601849 ANAPC15P60006 121 aa10.59□□□□□ -0.71
VRK3-224ENST00000601849 PFKPQ01813 784 aa10.59□□□□□ -0.71
VRK3-224ENST00000601849 SPIRE1Q08AE8 756 aa10.59□□□□□ -0.71
VRK3-224ENST00000601849 NR5A1Q13285 461 aa10.59□□□□□ -0.71
VRK3-224ENST00000601849 PRPF4BQ13523 1007 aaKnown RBP10.59□□□□□ -0.71
VRK3-224ENST00000601849 PPP2R5AQ15172 486 aa10.59□□□□□ -0.71
VRK3-224ENST00000601849 AMHR2Q16671 573 aa10.59□□□□□ -0.71
VRK3-224ENST00000601849 UVSSAQ2YD98 709 aa10.59□□□□□ -0.71
VRK3-224ENST00000601849 SPECC1Q5M775 1068 aa10.59□□□□□ -0.71
VRK3-224ENST00000601849 FAM171A1Q5VUB5 890 aa10.59□□□□□ -0.71
VRK3-224ENST00000601849 LILRA6Q6PI73 481 aa10.59□□□□□ -0.71
VRK3-224ENST00000601849 PPP4R3CPQ6ZMV5 832 aa10.59□□□□□ -0.71
VRK3-224ENST00000601849 RTL10Q7L3V2 364 aa10.59□□□□□ -0.71
VRK3-224ENST00000601849 MAEAQ7L5Y9 396 aa10.59□□□□□ -0.71
VRK3-224ENST00000601849 GPR152Q8TDT2 470 aa10.59□□□□□ -0.71
VRK3-224ENST00000601849 ASAP3Q8TDY4 903 aa10.59□□□□□ -0.71
VRK3-224ENST00000601849 PIGOQ8TEQ8 1089 aa10.59□□□□□ -0.71
VRK3-224ENST00000601849 IFT74Q96LB3 600 aa10.59□□□□□ -0.71
VRK3-224ENST00000601849 MYADMQ96S97 322 aa10.59□□□□□ -0.71
VRK3-224ENST00000601849 HINFPQ9BQA5 517 aa10.59□□□□□ -0.71
VRK3-224ENST00000601849 TBC1D17Q9HA65 648 aa10.59□□□□□ -0.71
VRK3-224ENST00000601849 TUFT1Q9NNX1 390 aa10.59□□□□□ -0.71
VRK3-224ENST00000601849 XPNPEP1Q9NQW7 623 aa10.59□□□□□ -0.71
VRK3-224ENST00000601849 ARHGEF3Q9NR81 526 aa10.59□□□□□ -0.71
VRK3-224ENST00000601849 SLC2A4RGQ9NR83 387 aa10.59□□□□□ -0.71
VRK3-224ENST00000601849 TPCN1Q9ULQ1 816 aa10.59□□□□□ -0.71
VRK3-224ENST00000601849 POLIQ9UNA4 740 aa10.59□□□□□ -0.71
VRK3-224ENST00000601849 KRBA1A5PL33 1030 aa10.58□□□□□ -0.72
VRK3-224ENST00000601849 NCAM2O15394 837 aa10.58□□□□□ -0.72
VRK3-224ENST00000601849 N4BP1O75113 896 aaKnown RBP10.58□□□□□ -0.72
VRK3-224ENST00000601849 PAPLNO95428 1278 aa10.58□□□□□ -0.72
VRK3-224ENST00000601849 HOXA9P31269 272 aa10.58□□□□□ -0.72
VRK3-224ENST00000601849 EFNA5P52803 228 aa10.58□□□□□ -0.72
VRK3-224ENST00000601849 PSMD5Q16401 504 aa10.58□□□□□ -0.72
VRK3-224ENST00000601849 FAM187BQ17R55 369 aa10.58□□□□□ -0.72
VRK3-224ENST00000601849 GRASPQ7Z6J2 395 aaPredicted RBP10.58□□□□□ -0.72
VRK3-224ENST00000601849 CDR2LQ86X02 465 aaPredicted RBP10.58□□□□□ -0.72
VRK3-224ENST00000601849 C1orf210Q8IVY1 113 aa10.58□□□□□ -0.72
VRK3-224ENST00000601849 DIS3L2Q8IYB7 885 aaKnown RBP10.58□□□□□ -0.72
VRK3-224ENST00000601849 DEPTORQ8TB45 409 aa10.58□□□□□ -0.72
VRK3-224ENST00000601849 ZNF707Q96C28 371 aaPredicted RBP10.58□□□□□ -0.72
VRK3-224ENST00000601849 B3GALT6Q96L58 329 aa10.58□□□□□ -0.72
VRK3-224ENST00000601849 BCO2Q9BYV7 579 aa10.58□□□□□ -0.72
VRK3-224ENST00000601849 FZD8Q9H461 694 aa10.58□□□□□ -0.72
VRK3-224ENST00000601849 GJB4Q9NTQ9 266 aa10.58□□□□□ -0.72
VRK3-224ENST00000601849 CDH7Q9ULB5 785 aa10.58□□□□□ -0.72
VRK3-224ENST00000601849 STK24Q9Y6E0 443 aa10.58□□□□□ -0.72
VRK3-224ENST00000601849 NUMBLQ9Y6R0 609 aa10.58□□□□□ -0.72
VRK3-224ENST00000601849 ARHGEF35A5YM69 484 aa10.57□□□□□ -0.72
VRK3-224ENST00000601849 CASTOR2A6NHX0 329 aa10.57□□□□□ -0.72
VRK3-224ENST00000601849 BTBD18B2RXH4 712 aa10.57□□□□□ -0.72
VRK3-224ENST00000601849 ANHXE9PGG2 379 aa10.57□□□□□ -0.72
VRK3-224ENST00000601849 ACKR2O00590 384 aa10.57□□□□□ -0.72
VRK3-224ENST00000601849 B4GALT5O43286 388 aa10.57□□□□□ -0.72
VRK3-224ENST00000601849 C8AP07357 584 aa10.57□□□□□ -0.72
VRK3-224ENST00000601849 DCNP07585 359 aaKnown RBP10.57□□□□□ -0.72
VRK3-224ENST00000601849 RPL17P18621 184 aaKnown RBP10.57□□□□□ -0.72
VRK3-224ENST00000601849 LIG1P18858 919 aa10.57□□□□□ -0.72
VRK3-224ENST00000601849 ELF1P32519 619 aa10.57□□□□□ -0.72
VRK3-224ENST00000601849 NAMPTP43490 491 aa10.57□□□□□ -0.72
VRK3-224ENST00000601849 YARSP54577 528 aaKnown RBP10.57□□□□□ -0.72
VRK3-224ENST00000601849 PRKCQQ04759 706 aa10.57□□□□□ -0.72
VRK3-224ENST00000601849 GNL2Q13823 731 aaKnown RBP10.57□□□□□ -0.72
VRK3-224ENST00000601849 DCAF4L1Q3SXM0 396 aa10.57□□□□□ -0.72
VRK3-224ENST00000601849 EARS2Q5JPH6 523 aaKnown RBP10.57□□□□□ -0.72
VRK3-224ENST00000601849 AXDND1Q5T1B0 1012 aaPredicted RBP10.57□□□□□ -0.72
VRK3-224ENST00000601849 HAUS3Q68CZ6 603 aa10.57□□□□□ -0.72
VRK3-224ENST00000601849 PRSS55Q6UWB4 352 aaPredicted RBP10.57□□□□□ -0.72
VRK3-224ENST00000601849 GSTCDQ8NEC7 633 aa10.57□□□□□ -0.72
VRK3-224ENST00000601849 PIK3R5Q8WYR1 880 aa10.57□□□□□ -0.72
VRK3-224ENST00000601849 UROC1Q96N76 676 aa10.57□□□□□ -0.72
VRK3-224ENST00000601849 MTMR9Q96QG7 549 aa10.57□□□□□ -0.72
VRK3-224ENST00000601849 NELL2Q99435 816 aa10.57□□□□□ -0.72
VRK3-224ENST00000601849 SNTG2Q9NY99 539 aa10.57□□□□□ -0.72
VRK3-224ENST00000601849 FBXW11Q9UKB1 542 aa10.57□□□□□ -0.72
VRK3-224ENST00000601849 F8W810 466 aa10.56□□□□□ -0.72
VRK3-224ENST00000601849 LAMTOR5O43504 91 aa10.56□□□□□ -0.72
VRK3-224ENST00000601849 KINO60870 393 aaKnown RBP10.56□□□□□ -0.72
VRK3-224ENST00000601849 B3GAT3O94766 335 aa10.56□□□□□ -0.72
VRK3-224ENST00000601849 PRKCBP05771 671 aa10.56□□□□□ -0.72
VRK3-224ENST00000601849 SDHBP21912 280 aa10.56□□□□□ -0.72
VRK3-224ENST00000601849 MUTP22033 750 aa10.56□□□□□ -0.72
VRK3-224ENST00000601849 RPA1P27694 616 aa10.56□□□□□ -0.72
VRK3-224ENST00000601849 MCM7P33993 719 aa10.56□□□□□ -0.72
VRK3-224ENST00000601849 MAGEA9P43362 315 aa10.56□□□□□ -0.72
VRK3-224ENST00000601849 STARD6P59095 220 aa10.56□□□□□ -0.72
VRK3-224ENST00000601849 GPC5P78333 572 aa10.56□□□□□ -0.72
VRK3-224ENST00000601849 ORC2Q13416 577 aaPredicted RBP10.56□□□□□ -0.72
VRK3-224ENST00000601849 HTR4Q13639 388 aa10.56□□□□□ -0.72
VRK3-224ENST00000601849 RTP2Q5QGT7 225 aa10.56□□□□□ -0.72
VRK3-224ENST00000601849 CDCA2Q69YH5 1023 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms