RNA–Protein interactions for RNA: ENST00000601665.5

NUP62-223, Transcript of nucleoporin 62, human

TSL 5

Gene NUP62, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-223	ENST00000601665	HEBP1	Q9NRV9	189 aa		13.69	□□□□□ -0.22
NUP62-223	ENST00000601665	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.69	□□□□□ -0.22
NUP62-223	ENST00000601665	SEMA4G	Q9NTN9	838 aa		13.69	□□□□□ -0.22
NUP62-223	ENST00000601665	RALY	Q9UKM9	306 aa	Known RBP	13.69	□□□□□ -0.22
NUP62-223	ENST00000601665	GIT1	Q9Y2X7	761 aa		13.69	□□□□□ -0.22
NUP62-223	ENST00000601665	MRPS23	Q9Y3D9	190 aa	Known RBP	13.69	□□□□□ -0.22
NUP62-223	ENST00000601665	MAN2B1	O00754	1011 aa		13.68	□□□□□ -0.22
NUP62-223	ENST00000601665	ASAP2	O43150	1006 aa		13.68	□□□□□ -0.22
NUP62-223	ENST00000601665	FOXD2	O60548	495 aa	Predicted RBP	13.68	□□□□□ -0.22
NUP62-223	ENST00000601665	STBD1	O95210	358 aa		13.68	□□□□□ -0.22
NUP62-223	ENST00000601665	AXL	P30530	894 aa		13.68	□□□□□ -0.22
NUP62-223	ENST00000601665	HOXA9	P31269	272 aa		13.68	□□□□□ -0.22
NUP62-223	ENST00000601665	ADD1	P35611	737 aa	Known RBP	13.68	□□□□□ -0.22
NUP62-223	ENST00000601665	RFC5	P40937	340 aa		13.68	□□□□□ -0.22
NUP62-223	ENST00000601665	CCR3	P51677	355 aa		13.68	□□□□□ -0.22
NUP62-223	ENST00000601665	RCAN1	P53805	252 aa		13.68	□□□□□ -0.22
NUP62-223	ENST00000601665	NPEPPS	P55786	919 aa		13.68	□□□□□ -0.22
NUP62-223	ENST00000601665	SIM2	Q14190	667 aa	Predicted RBP	13.68	□□□□□ -0.22
NUP62-223	ENST00000601665	NECTIN1	Q15223	517 aa		13.68	□□□□□ -0.22
NUP62-223	ENST00000601665	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
NUP62-223	ENST00000601665	PSMD5	Q16401	504 aa		13.68	□□□□□ -0.22
NUP62-223	ENST00000601665	RTP2	Q5QGT7	225 aa		13.68	□□□□□ -0.22
NUP62-223	ENST00000601665	FAM171A1	Q5VUB5	890 aa		13.68	□□□□□ -0.22
NUP62-223	ENST00000601665	PRR23C	Q6ZRP0	262 aa		13.68	□□□□□ -0.22
NUP62-223	ENST00000601665	DHX32	Q7L7V1	743 aa	Known RBP	13.68	□□□□□ -0.22
NUP62-223	ENST00000601665	NPAS3	Q8IXF0	933 aa		13.68	□□□□□ -0.22
NUP62-223	ENST00000601665	SLC7A14	Q8TBB6	771 aa		13.68	□□□□□ -0.22
NUP62-223	ENST00000601665	RABGGTA	Q92696	567 aa		13.68	□□□□□ -0.22
NUP62-223	ENST00000601665	CPB2	Q96IY4	423 aa		13.68	□□□□□ -0.22
NUP62-223	ENST00000601665	MIOS	Q9NXC5	875 aa		13.68	□□□□□ -0.22
NUP62-223	ENST00000601665	KCNH3	Q9ULD8	1083 aa		13.68	□□□□□ -0.22
NUP62-223	ENST00000601665	INO80B-WBP1	J3KQ70	363 aa		13.67	□□□□□ -0.22
NUP62-223	ENST00000601665	TSPAN1	O60635	241 aa		13.67	□□□□□ -0.22
NUP62-223	ENST00000601665	ECI2	O75521	394 aa		13.67	□□□□□ -0.22
NUP62-223	ENST00000601665	QARS	P47897	775 aa	Known RBP	13.67	□□□□□ -0.22
NUP62-223	ENST00000601665	GRIK3	Q13003	919 aa		13.67	□□□□□ -0.22
NUP62-223	ENST00000601665	COL9A2	Q14055	689 aa	Predicted RBP	13.67	□□□□□ -0.22
NUP62-223	ENST00000601665	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.67	□□□□□ -0.22
NUP62-223	ENST00000601665	CSRP2	Q16527	193 aa		13.67	□□□□□ -0.22
NUP62-223	ENST00000601665		Q4G0T1	1027 aa		13.67	□□□□□ -0.22
NUP62-223	ENST00000601665	PDXDC1	Q6P996	788 aa		13.67	□□□□□ -0.22
NUP62-223	ENST00000601665	TBCK	Q8TEA7	893 aa		13.67	□□□□□ -0.22
NUP62-223	ENST00000601665	HASPIN	Q8TF76	798 aa		13.67	□□□□□ -0.22
NUP62-223	ENST00000601665	DNASE1L2	Q92874	299 aa		13.67	□□□□□ -0.22
NUP62-223	ENST00000601665	MCRS1	Q96EZ8	462 aa		13.67	□□□□□ -0.22
NUP62-223	ENST00000601665	IER2	Q9BTL4	223 aa		13.67	□□□□□ -0.22
NUP62-223	ENST00000601665	C22orf23	Q9BZE7	217 aa		13.67	□□□□□ -0.22
NUP62-223	ENST00000601665	CSRNP2	Q9H175	543 aa		13.67	□□□□□ -0.22
NUP62-223	ENST00000601665	BRD9	Q9H8M2	597 aa		13.67	□□□□□ -0.22
NUP62-223	ENST00000601665	PARP2	Q9UGN5	583 aa		13.67	□□□□□ -0.22
NUP62-223	ENST00000601665	PPME1	Q9Y570	386 aa		13.67	□□□□□ -0.22
NUP62-223	ENST00000601665	F5	P12259	2224 aa		13.67	□□□□□ -0.22
NUP62-223	ENST00000601665	PRPF3	O43395	683 aa	Known RBP	13.66	□□□□□ -0.22
NUP62-223	ENST00000601665	AKAP5	P24588	427 aa		13.66	□□□□□ -0.22
NUP62-223	ENST00000601665	NLRP5	P59047	1200 aa		13.66	□□□□□ -0.22
NUP62-223	ENST00000601665	TFDP1	Q14186	410 aa		13.66	□□□□□ -0.22
NUP62-223	ENST00000601665	EMC2	Q15006	297 aa		13.66	□□□□□ -0.22
NUP62-223	ENST00000601665	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.66	□□□□□ -0.22
NUP62-223	ENST00000601665	PIK3R5	Q8WYR1	880 aa		13.66	□□□□□ -0.22
NUP62-223	ENST00000601665	CLSTN3	Q9BQT9	956 aa		13.66	□□□□□ -0.22
NUP62-223	ENST00000601665	CHRD	Q9H2X0	955 aa		13.66	□□□□□ -0.22
NUP62-223	ENST00000601665	NXF3	Q9H4D5	531 aa	Known RBP	13.66	□□□□□ -0.22
NUP62-223	ENST00000601665	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.66	□□□□□ -0.22
NUP62-223	ENST00000601665	HCFC1R1	Q9NWW0	138 aa		13.66	□□□□□ -0.22
NUP62-223	ENST00000601665	GDE1	Q9NZC3	331 aa		13.66	□□□□□ -0.22
NUP62-223	ENST00000601665	KLK14	Q9P0G3	267 aa		13.66	□□□□□ -0.22
NUP62-223	ENST00000601665	ZFYVE26	Q68DK2	2539 aa		13.66	□□□□□ -0.22
NUP62-223	ENST00000601665	DOCK6	Q96HP0	2047 aa		13.66	□□□□□ -0.22
NUP62-223	ENST00000601665	TDRD15	B5MCY1	1934 aa	Known RBP	13.65	□□□□□ -0.22
NUP62-223	ENST00000601665	TDP2	O95551	362 aa		13.65	□□□□□ -0.22
NUP62-223	ENST00000601665	EXOSC10	Q01780	885 aa	Known RBP	13.65	□□□□□ -0.22
NUP62-223	ENST00000601665	ELAVL2	Q12926	359 aa	Known RBP	13.65	□□□□□ -0.22
NUP62-223	ENST00000601665	MXD4	Q14582	209 aa	Predicted RBP	13.65	□□□□□ -0.22
NUP62-223	ENST00000601665	UVSSA	Q2YD98	709 aa		13.65	□□□□□ -0.22
NUP62-223	ENST00000601665	AASDH	Q4L235	1098 aa	Predicted RBP	13.65	□□□□□ -0.22
NUP62-223	ENST00000601665	CEP68	Q76N32	757 aa		13.65	□□□□□ -0.22
NUP62-223	ENST00000601665	OTUD6A	Q7L8S5	288 aa		13.65	□□□□□ -0.22
NUP62-223	ENST00000601665	FERMT3	Q86UX7	667 aa		13.65	□□□□□ -0.22
NUP62-223	ENST00000601665	ESYT1	Q9BSJ8	1104 aa		13.65	□□□□□ -0.22
NUP62-223	ENST00000601665	DHX33	Q9H6R0	707 aa	Known RBP	13.65	□□□□□ -0.22
NUP62-223	ENST00000601665	LMAN1L	Q9HAT1	526 aa		13.65	□□□□□ -0.22
NUP62-223	ENST00000601665	VPS54	Q9P1Q0	977 aa		13.65	□□□□□ -0.22
NUP62-223	ENST00000601665	DNMT3B	Q9UBC3	853 aa	Known RBP	13.65	□□□□□ -0.22
NUP62-223	ENST00000601665	CASTOR2	A6NHX0	329 aa		13.64	□□□□□ -0.23
NUP62-223	ENST00000601665	GDF9	O60383	454 aa		13.64	□□□□□ -0.23
NUP62-223	ENST00000601665	NPTXR	O95502	500 aa		13.64	□□□□□ -0.23
NUP62-223	ENST00000601665	POU2F2	P09086	479 aa		13.64	□□□□□ -0.23
NUP62-223	ENST00000601665	OR1D2	P34982	312 aa		13.64	□□□□□ -0.23
NUP62-223	ENST00000601665	CXCL12	P48061	93 aa		13.64	□□□□□ -0.23
NUP62-223	ENST00000601665	FZD5	Q13467	585 aa		13.64	□□□□□ -0.23
NUP62-223	ENST00000601665	XKR9	Q5GH70	373 aa		13.64	□□□□□ -0.23
NUP62-223	ENST00000601665	C12orf50	Q8NA57	414 aa	Predicted RBP	13.64	□□□□□ -0.23
NUP62-223	ENST00000601665	ZNF579	Q8NAF0	562 aa	Known RBP	13.64	□□□□□ -0.23
NUP62-223	ENST00000601665	LNX1	Q8TBB1	728 aa	Predicted RBP	13.64	□□□□□ -0.23
NUP62-223	ENST00000601665	IRF7	Q92985	503 aa		13.64	□□□□□ -0.23
NUP62-223	ENST00000601665	ELSPBP1	Q96BH3	223 aa		13.64	□□□□□ -0.23
NUP62-223	ENST00000601665	MTR	Q99707	1265 aa		13.64	□□□□□ -0.23
NUP62-223	ENST00000601665	SLC26A6	Q9BXS9	759 aa		13.64	□□□□□ -0.23
NUP62-223	ENST00000601665	PLA2G2F	Q9BZM2	168 aa		13.64	□□□□□ -0.23
NUP62-223	ENST00000601665	DDX25	Q9UHL0	483 aa	Known RBP	13.64	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms