RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 PDIA5Q14554 519 aa18.76■□□□□ 0.59
SCAF1-204ENST00000601038 HSP90AA2PQ14568 343 aaPredicted RBP18.76■□□□□ 0.59
SCAF1-204ENST00000601038 TMEM132AQ24JP5 1023 aa18.76■□□□□ 0.59
SCAF1-204ENST00000601038 RIN2Q8WYP3 895 aaPredicted RBP18.76■□□□□ 0.59
SCAF1-204ENST00000601038 RABGGTAQ92696 567 aa18.76■□□□□ 0.59
SCAF1-204ENST00000601038 B3GALT6Q96L58 329 aa18.76■□□□□ 0.59
SCAF1-204ENST00000601038 PHOX2BQ99453 314 aa18.76■□□□□ 0.59
SCAF1-204ENST00000601038 KIF2CQ99661 725 aa18.76■□□□□ 0.59
SCAF1-204ENST00000601038 ADPGKQ9BRR6 497 aa18.76■□□□□ 0.59
SCAF1-204ENST00000601038 CCDC113Q9H0I3 377 aa18.76■□□□□ 0.59
SCAF1-204ENST00000601038 WDR6Q9NNW5 1121 aaKnown RBP18.76■□□□□ 0.59
SCAF1-204ENST00000601038 THP07101 528 aa18.75■□□□□ 0.59
SCAF1-204ENST00000601038 U2AF2P26368 475 aaKnown RBP eCLIP18.75■□□□□ 0.59
SCAF1-204ENST00000601038 EFNA5P52803 228 aa18.75■□□□□ 0.59
SCAF1-204ENST00000601038 CREMQ03060 361 aa18.75■□□□□ 0.59
SCAF1-204ENST00000601038 TDGQ13569 410 aa18.75■□□□□ 0.59
SCAF1-204ENST00000601038 ECM1Q16610 540 aa18.75■□□□□ 0.59
SCAF1-204ENST00000601038 LILRA6Q6PI73 481 aa18.75■□□□□ 0.59
SCAF1-204ENST00000601038 PALB2Q86YC2 1186 aa18.75■□□□□ 0.59
SCAF1-204ENST00000601038 STAMQ92783 540 aa18.75■□□□□ 0.59
SCAF1-204ENST00000601038 KIFAP3Q92845 792 aa18.75■□□□□ 0.59
SCAF1-204ENST00000601038 IFT74Q96LB3 600 aa18.75■□□□□ 0.59
SCAF1-204ENST00000601038 BHMT2Q9H2M3 363 aa18.75■□□□□ 0.59
SCAF1-204ENST00000601038 KCNK12Q9HB15 430 aa18.75■□□□□ 0.59
SCAF1-204ENST00000601038 SNTG2Q9NY99 539 aa18.75■□□□□ 0.59
SCAF1-204ENST00000601038 LRWD1Q9UFC0 647 aa18.75■□□□□ 0.59
SCAF1-204ENST00000601038 STK24Q9Y6E0 443 aa18.75■□□□□ 0.59
SCAF1-204ENST00000601038 WDFY4Q6ZS81 3184 aa18.75■□□□□ 0.59
SCAF1-204ENST00000601038 SF3B1O75533 1304 aaKnown RBP eCLIP18.74■□□□□ 0.59
SCAF1-204ENST00000601038 PLXNA3P51805 1871 aa18.74■□□□□ 0.59
SCAF1-204ENST00000601038 PTGESO14684 152 aa18.74■□□□□ 0.59
SCAF1-204ENST00000601038 TGM5O43548 720 aa18.74■□□□□ 0.59
SCAF1-204ENST00000601038 RFPL2O75678 378 aa18.74■□□□□ 0.59
SCAF1-204ENST00000601038 RECQL4O94761 1208 aa18.74■□□□□ 0.59
SCAF1-204ENST00000601038 SPATA31D3P0C874 917 aa18.74■□□□□ 0.59
SCAF1-204ENST00000601038 LIG1P18858 919 aa18.74■□□□□ 0.59
SCAF1-204ENST00000601038 SPATA31D4Q6ZUB0 917 aa18.74■□□□□ 0.59
SCAF1-204ENST00000601038 SMG7Q92540 1137 aaKnown RBP18.74■□□□□ 0.59
SCAF1-204ENST00000601038 PAAF1Q9BRP4 392 aa18.74■□□□□ 0.59
SCAF1-204ENST00000601038 ZDHHC7Q9NXF8 308 aa18.74■□□□□ 0.59
SCAF1-204ENST00000601038 IGSF9Q9P2J2 1179 aa18.74■□□□□ 0.59
SCAF1-204ENST00000601038 CACNG4Q9UBN1 327 aa18.74■□□□□ 0.59
SCAF1-204ENST00000601038 KIAA1024Q9UPX6 916 aa18.74■□□□□ 0.59
SCAF1-204ENST00000601038 USP20Q9Y2K6 914 aa18.74■□□□□ 0.59
SCAF1-204ENST00000601038 MTCL1Q9Y4B5 1905 aaKnown RBP18.73■□□□□ 0.59
SCAF1-204ENST00000601038 CASTOR2A6NHX0 329 aa18.73■□□□□ 0.59
SCAF1-204ENST00000601038 N4BP1O75113 896 aaKnown RBP18.73■□□□□ 0.59
SCAF1-204ENST00000601038 MYBP10242 640 aa18.73■□□□□ 0.59
SCAF1-204ENST00000601038 TOB1P50616 345 aaPredicted RBP18.73■□□□□ 0.59
SCAF1-204ENST00000601038 PTGDRQ13258 359 aa18.73■□□□□ 0.59
SCAF1-204ENST00000601038 NBR1Q14596 966 aa18.73■□□□□ 0.59
SCAF1-204ENST00000601038 EEF1DP3Q658K8 133 aa18.73■□□□□ 0.59
SCAF1-204ENST00000601038 ASTLQ6HA08 431 aaPredicted RBP18.73■□□□□ 0.59
SCAF1-204ENST00000601038 GLYCTKQ8IVS8 523 aa18.73■□□□□ 0.59
SCAF1-204ENST00000601038 IGSF22Q8N9C0 903 aa18.73■□□□□ 0.59
SCAF1-204ENST00000601038 ZNF707Q96C28 371 aaPredicted RBP18.73■□□□□ 0.59
SCAF1-204ENST00000601038 RAB34Q9BZG1 259 aa18.73■□□□□ 0.59
SCAF1-204ENST00000601038 NT5C3AQ9H0P0 336 aa18.73■□□□□ 0.59
SCAF1-204ENST00000601038 MFSD1Q9H3U5 465 aa18.73■□□□□ 0.59
SCAF1-204ENST00000601038 POLD4Q9HCU8 107 aa18.73■□□□□ 0.59
SCAF1-204ENST00000601038 CLUHO75153 1309 aa18.73■□□□□ 0.59
SCAF1-204ENST00000601038 GALR2O43603 387 aaPredicted RBP18.72■□□□□ 0.59
SCAF1-204ENST00000601038 EDN1P05305 212 aa18.72■□□□□ 0.59
SCAF1-204ENST00000601038 RPL17P18621 184 aaKnown RBP18.72■□□□□ 0.59
SCAF1-204ENST00000601038 CLCN5P51795 746 aa18.72■□□□□ 0.59
SCAF1-204ENST00000601038 ELAVL2Q12926 359 aaKnown RBP18.72■□□□□ 0.59
SCAF1-204ENST00000601038 NAB2Q15742 525 aa18.72■□□□□ 0.59
SCAF1-204ENST00000601038 DCAF4L1Q3SXM0 396 aa18.72■□□□□ 0.59
SCAF1-204ENST00000601038 RTP2Q5QGT7 225 aa18.72■□□□□ 0.59
SCAF1-204ENST00000601038 FAM171A1Q5VUB5 890 aa18.72■□□□□ 0.59
SCAF1-204ENST00000601038 PRSS55Q6UWB4 352 aaPredicted RBP18.72■□□□□ 0.59
SCAF1-204ENST00000601038 TMEM105Q8N8V8 129 aa18.72■□□□□ 0.59
SCAF1-204ENST00000601038 TTPALQ9BTX7 342 aa18.72■□□□□ 0.59
SCAF1-204ENST00000601038 KIFC3Q9BVG8 833 aa18.72■□□□□ 0.59
SCAF1-204ENST00000601038 PRKD2Q9BZL6 878 aa18.72■□□□□ 0.59
SCAF1-204ENST00000601038 CXCL16Q9H2A7 254 aa18.72■□□□□ 0.59
SCAF1-204ENST00000601038 PIDD1Q9HB75 910 aa18.72■□□□□ 0.59
SCAF1-204ENST00000601038 DDX19AQ9NUU7 478 aaKnown RBP18.72■□□□□ 0.59
SCAF1-204ENST00000601038 EPS15L1Q9UBC2 864 aa18.72■□□□□ 0.59
SCAF1-204ENST00000601038 DUSP12Q9UNI6 340 aa18.72■□□□□ 0.59
SCAF1-204ENST00000601038 PCDHB6Q9Y5E3 794 aa18.72■□□□□ 0.59
SCAF1-204ENST00000601038 K7ERI5 159 aa18.71■□□□□ 0.59
SCAF1-204ENST00000601038 LAD1O00515 517 aa18.71■□□□□ 0.59
SCAF1-204ENST00000601038 KIF4AO95239 1232 aa18.71■□□□□ 0.59
SCAF1-204ENST00000601038 GBP2P32456 591 aaPredicted RBP18.71■□□□□ 0.59
SCAF1-204ENST00000601038 NT5DC1Q5TFE4 455 aa18.71■□□□□ 0.59
SCAF1-204ENST00000601038 ATF7IP2Q5U623 682 aa18.71■□□□□ 0.59
SCAF1-204ENST00000601038 APBB1IPQ7Z5R6 666 aaPredicted RBP18.71■□□□□ 0.59
SCAF1-204ENST00000601038 SNX29Q8TEQ0 813 aa18.71■□□□□ 0.59
SCAF1-204ENST00000601038 HASPINQ8TF76 798 aa18.71■□□□□ 0.59
SCAF1-204ENST00000601038 PIK3R5Q8WYR1 880 aa18.71■□□□□ 0.59
SCAF1-204ENST00000601038 ATOH1Q92858 354 aaPredicted RBP18.71■□□□□ 0.59
SCAF1-204ENST00000601038 DNM3Q9UQ16 869 aa18.71■□□□□ 0.59
SCAF1-204ENST00000601038 GDAQ9Y2T3 454 aa18.71■□□□□ 0.59
SCAF1-204ENST00000601038 ZMYND10O75800 440 aa18.7■□□□□ 0.58
SCAF1-204ENST00000601038 PRPHP41219 470 aa18.7■□□□□ 0.58
SCAF1-204ENST00000601038 C8orf34Q49A92 452 aa18.7■□□□□ 0.58
SCAF1-204ENST00000601038 KRT79Q5XKE5 535 aa18.7■□□□□ 0.58
SCAF1-204ENST00000601038 CEP57Q86XR8 500 aa18.7■□□□□ 0.58
SCAF1-204ENST00000601038 LNX1Q8TBB1 728 aaPredicted RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms